RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	RCL1	Q08096	367 aa	Predicted RBP	4.97	□□□□□ -1.61
TPM1	YNL079C	TRE1	Q08919	783 aa		4.97	□□□□□ -1.61
TPM1	YNL079C	RPL11B	Q3E757	174 aa	Predicted RBP	4.97	□□□□□ -1.61
TPM1	YNL079C	STH1	P32597	1359 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TRP3	P00937	484 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
TPM1	YNL079C	SRO9	P25567	434 aa	Known RBP	4.96	□□□□□ -1.62
TPM1	YNL079C	MDL2	P33311	773 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	PEX7	P39108	375 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	YFL054C	P43549	646 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	HUL5	P53119	910 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	BDF2	Q07442	638 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-H	O13535	1793 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-DR5	P0C2I2	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-DR6	P0C2I3	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-LR2	P0C2I5	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-PR2	P0C2J0	1756 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-JR1	P47098	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-ER1	Q03612	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-BR	Q12193	1756 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-GR2	Q12269	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-OL	Q12273	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-GR3	Q12316	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-PL	Q12414	1755 aa	Known RBP	4.96	□□□□□ -1.62
TPM1	YNL079C	TY1B-OR	Q92393	1755 aa		4.96	□□□□□ -1.62
TPM1	YNL079C	PAN1	P32521	1480 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	COQ4	O13525	335 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	CYC7	P00045	113 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	GCD1	P09032	578 aa	Predicted RBP	4.95	□□□□□ -1.62
TPM1	YNL079C	SBP1	P10080	294 aa	Known RBP	4.95	□□□□□ -1.62
TPM1	YNL079C	RPL8B	P29453	256 aa	Known RBP	4.95	□□□□□ -1.62
TPM1	YNL079C	SRP40	P32583	406 aa	Predicted RBP	4.95	□□□□□ -1.62
TPM1	YNL079C	PFD1	P46988	109 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	TIM54	P47045	478 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	SPO75	Q07798	868 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	FMP25	Q08023	583 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	NSI1	Q12457	570 aa		4.95	□□□□□ -1.62
TPM1	YNL079C	VTH1	P40438	1549 aa		4.94	□□□□□ -1.62
TPM1	YNL079C	VTH2	P40890	1549 aa		4.94	□□□□□ -1.62
TPM1	YNL079C	YHR020W	P38708	688 aa	Known RBP	4.94	□□□□□ -1.62
TPM1	YNL079C	PIK1	P39104	1066 aa		4.94	□□□□□ -1.62
TPM1	YNL079C	GEM1	P39722	662 aa		4.94	□□□□□ -1.62
TPM1	YNL079C	MED7	Q08278	222 aa		4.94	□□□□□ -1.62
TPM1	YNL079C	ACM1	Q08981	209 aa		4.94	□□□□□ -1.62
TPM1	YNL079C	CDC53	Q12018	815 aa	Known RBP	4.94	□□□□□ -1.62
TPM1	YNL079C	TSC11	P40061	1430 aa		4.94	□□□□□ -1.62
TPM1	YNL079C	SLA2	P33338	968 aa		4.93	□□□□□ -1.62
TPM1	YNL079C	YKR073C	P36153	106 aa		4.93	□□□□□ -1.62
TPM1	YNL079C	CCZ1	P38273	704 aa		4.93	□□□□□ -1.62
TPM1	YNL079C	UTP8	P53276	713 aa	Known RBP	4.93	□□□□□ -1.62
TPM1	YNL079C	TRM732	Q03496	1420 aa		4.93	□□□□□ -1.62
TPM1	YNL079C	SSY1	Q03770	852 aa		4.93	□□□□□ -1.62
TPM1	YNL079C	RSC58	Q07979	502 aa		4.93	□□□□□ -1.62
TPM1	YNL079C	PDR15	Q04182	1529 aa	Known RBP	4.92	□□□□□ -1.62
TPM1	YNL079C	PRO1	P32264	428 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	YKL091C	P33324	310 aa	Known RBP	4.92	□□□□□ -1.62
TPM1	YNL079C	UGA2	P38067	497 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	PTC7	P38797	343 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	GTS1	P40956	396 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	RPN4	Q03465	531 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	EAF1	Q06337	982 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	NBA1	Q08229	501 aa	Known RBP	4.92	□□□□□ -1.62
TPM1	YNL079C	FLC1	Q08967	793 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	OSH2	Q12451	1283 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	MLP2	P40457	1679 aa		4.92	□□□□□ -1.62
TPM1	YNL079C	PRP9	P19736	530 aa	Known RBP	4.91	□□□□□ -1.62
TPM1	YNL079C	ADP1	P25371	1049 aa		4.91	□□□□□ -1.62
TPM1	YNL079C	TOS1	P38288	455 aa		4.91	□□□□□ -1.62
TPM1	YNL079C	ERP6	P53198	216 aa		4.91	□□□□□ -1.62
TPM1	YNL079C	YGR125W	P53273	1036 aa		4.91	□□□□□ -1.62
TPM1	YNL079C	FPR4	Q06205	392 aa	Predicted RBP	4.91	□□□□□ -1.62
TPM1	YNL079C	YOR131C	Q12486	218 aa		4.91	□□□□□ -1.62
TPM1	YNL079C	ULS1	Q08562	1619 aa		4.9	□□□□□ -1.62
TPM1	YNL079C	SNT2	P53127	1403 aa		4.9	□□□□□ -1.62
TPM1	YNL079C	CIT1	P00890	479 aa		4.9	□□□□□ -1.63
TPM1	YNL079C	HSP60	P19882	572 aa	Known RBP	4.9	□□□□□ -1.63
TPM1	YNL079C	YKL151C	P36059	337 aa		4.9	□□□□□ -1.63
TPM1	YNL079C	BUD6	P41697	788 aa		4.9	□□□□□ -1.63
TPM1	YNL079C	ALR2	P43553	858 aa		4.9	□□□□□ -1.63
TPM1	YNL079C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
TPM1	YNL079C	ALO1	P54783	526 aa	Known RBP	4.9	□□□□□ -1.63
TPM1	YNL079C	SDH1	Q00711	640 aa		4.9	□□□□□ -1.63
TPM1	YNL079C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
TPM1	YNL079C	RSB1	Q08417	382 aa		4.9	□□□□□ -1.63
TPM1	YNL079C	GEA1	P47102	1408 aa	Predicted RBP	4.89	□□□□□ -1.63
TPM1	YNL079C	BI4	P03879	638 aa		4.89	□□□□□ -1.63
TPM1	YNL079C	THS1	P04801	734 aa	Known RBP	4.89	□□□□□ -1.63
TPM1	YNL079C	ARE1	P25628	610 aa		4.89	□□□□□ -1.63
TPM1	YNL079C	AIM26	P32858	118 aa		4.89	□□□□□ -1.63
TPM1	YNL079C	RSP5	P39940	809 aa	Known RBP	4.89	□□□□□ -1.63
TPM1	YNL079C	HRQ1	Q05549	1077 aa		4.89	□□□□□ -1.63
TPM1	YNL079C	DUS3	Q06053	668 aa	Known RBP	4.89	□□□□□ -1.63
TPM1	YNL079C	ATG13	Q06628	738 aa		4.89	□□□□□ -1.63
TPM1	YNL079C	YDR306C	Q06640	478 aa		4.89	□□□□□ -1.63
TPM1	YNL079C	UBX5	Q06682	500 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 325 ms