RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W RFC5P38251 354 aa4.78□□□□□ -1.64
NOP56YLR197W MTC3P53077 123 aa4.78□□□□□ -1.64
NOP56YLR197W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
NOP56YLR197W HRQ1Q05549 1077 aa4.78□□□□□ -1.64
NOP56YLR197W DFG16Q99234 619 aa4.78□□□□□ -1.64
NOP56YLR197W ACE2P21192 770 aa4.77□□□□□ -1.65
NOP56YLR197W RRT14P40470 206 aa4.77□□□□□ -1.65
NOP56YLR197W IOC3P43596 787 aa4.77□□□□□ -1.65
NOP56YLR197W GUS1P46655 708 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
NOP56YLR197W TIM54P47045 478 aa4.77□□□□□ -1.65
NOP56YLR197W HUL5P53119 910 aa4.77□□□□□ -1.65
NOP56YLR197W UTP8P53276 713 aaKnown RBP4.77□□□□□ -1.65
NOP56YLR197W SRP1Q02821 542 aaKnown RBP4.77□□□□□ -1.65
NOP56YLR197W NSE3Q05541 303 aa4.77□□□□□ -1.65
NOP56YLR197W DUS3Q06053 668 aaKnown RBP4.77□□□□□ -1.65
NOP56YLR197W YDR306CQ06640 478 aa4.77□□□□□ -1.65
NOP56YLR197W SAH1P39954 449 aaKnown RBP4.77□□□□□ -1.65
NOP56YLR197W ENV11P53246 860 aa4.77□□□□□ -1.65
NOP56YLR197W EAF1Q06337 982 aa4.77□□□□□ -1.65
NOP56YLR197W BDF2Q07442 638 aa4.77□□□□□ -1.65
NOP56YLR197W OSH2Q12451 1283 aa4.77□□□□□ -1.65
NOP56YLR197W STI1P15705 589 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
NOP56YLR197W PRP9P19736 530 aaKnown RBP4.76□□□□□ -1.65
NOP56YLR197W ETP1P38748 585 aaKnown RBP4.76□□□□□ -1.65
NOP56YLR197W ALR2P43553 858 aa4.76□□□□□ -1.65
NOP56YLR197W RSM24Q03976 319 aa4.76□□□□□ -1.65
NOP56YLR197W CDC53Q12018 815 aaKnown RBP4.76□□□□□ -1.65
NOP56YLR197W YLL058WQ12198 575 aa4.76□□□□□ -1.65
NOP56YLR197W YDL177CQ12257 170 aa4.76□□□□□ -1.65
NOP56YLR197W ARE1P25628 610 aa4.75□□□□□ -1.65
NOP56YLR197W APL1P27351 700 aa4.75□□□□□ -1.65
NOP56YLR197W AAR2P32357 355 aaPredicted RBP4.75□□□□□ -1.65
NOP56YLR197W CDC12P32468 407 aaKnown RBP4.75□□□□□ -1.65
NOP56YLR197W SRP40P32583 406 aaPredicted RBP4.75□□□□□ -1.65
NOP56YLR197W HBS1P32769 611 aaKnown RBP4.75□□□□□ -1.65
NOP56YLR197W YHR020WP38708 688 aaKnown RBP4.75□□□□□ -1.65
NOP56YLR197W ECL1P48235 211 aa4.75□□□□□ -1.65
NOP56YLR197W HFM1P51979 1187 aa4.75□□□□□ -1.65
NOP56YLR197W ERP6P53198 216 aa4.75□□□□□ -1.65
NOP56YLR197W YGR125WP53273 1036 aa4.75□□□□□ -1.65
NOP56YLR197W NRD1P53617 575 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
NOP56YLR197W MDM38Q08179 573 aa4.75□□□□□ -1.65
NOP56YLR197W FLC1Q08967 793 aa4.75□□□□□ -1.65
NOP56YLR197W CIT1P00890 479 aa4.74□□□□□ -1.65
NOP56YLR197W KIN2P13186 1147 aaKnown RBP4.74□□□□□ -1.65
NOP56YLR197W HSP60P19882 572 aaKnown RBP4.74□□□□□ -1.65
NOP56YLR197W PPH3P32345 308 aa4.74□□□□□ -1.65
NOP56YLR197W UBX5Q06682 500 aa4.74□□□□□ -1.65
NOP56YLR197W CYC1P00044 109 aaPredicted RBP4.73□□□□□ -1.65
NOP56YLR197W ADE8P04161 214 aa4.73□□□□□ -1.65
NOP56YLR197W SEG2P34250 1132 aa4.73□□□□□ -1.65
NOP56YLR197W SRT1Q03175 343 aa4.73□□□□□ -1.65
NOP56YLR197W RIB2Q12362 591 aaKnown RBP4.73□□□□□ -1.65
NOP56YLR197W SRM1P21827 482 aa4.72□□□□□ -1.65
NOP56YLR197W GIC1P38785 314 aa4.72□□□□□ -1.65
NOP56YLR197W RSP5P39940 809 aaKnown RBP4.72□□□□□ -1.65
NOP56YLR197W SIT1P39980 628 aa4.72□□□□□ -1.65
NOP56YLR197W TPO2P53283 614 aa4.72□□□□□ -1.65
NOP56YLR197W SNO2P53823 222 aa4.72□□□□□ -1.65
NOP56YLR197W MRPL22P53881 309 aa4.72□□□□□ -1.65
NOP56YLR197W OSW2Q12202 724 aa4.72□□□□□ -1.65
NOP56YLR197W CMP2P14747 604 aa4.72□□□□□ -1.65
NOP56YLR197W CDC11P32458 415 aa4.72□□□□□ -1.65
NOP56YLR197W YKL091CP33324 310 aaKnown RBP4.72□□□□□ -1.65
NOP56YLR197W YBR284WP38150 797 aa4.72□□□□□ -1.65
NOP56YLR197W YAP1801P38856 637 aa4.72□□□□□ -1.65
NOP56YLR197W CCC2P38995 1004 aa4.72□□□□□ -1.65
NOP56YLR197W MSC2Q03455 724 aa4.72□□□□□ -1.65
NOP56YLR197W SIZ1Q04195 904 aa4.72□□□□□ -1.65
NOP56YLR197W XYL2Q07993 356 aa4.72□□□□□ -1.65
NOP56YLR197W YOR131CQ12486 218 aa4.72□□□□□ -1.65
NOP56YLR197W HBN1Q96VH4 193 aa4.72□□□□□ -1.65
NOP56YLR197W FUN30P31380 1131 aa4.71□□□□□ -1.66
NOP56YLR197W AFR1P33304 620 aa4.71□□□□□ -1.66
NOP56YLR197W YRO2P38079 344 aa4.71□□□□□ -1.66
NOP56YLR197W NPP2P39997 493 aa4.71□□□□□ -1.66
NOP56YLR197W HUL4P40985 892 aa4.71□□□□□ -1.66
NOP56YLR197W AVT1P47082 602 aa4.71□□□□□ -1.66
NOP56YLR197W GYP7P48365 746 aa4.71□□□□□ -1.66
NOP56YLR197W RPN4Q03465 531 aa4.71□□□□□ -1.66
NOP56YLR197W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
NOP56YLR197W YPR071WQ12346 211 aa4.71□□□□□ -1.66
NOP56YLR197W GAL10P04397 699 aa4.7□□□□□ -1.66
NOP56YLR197W NPP1P25353 742 aa4.7□□□□□ -1.66
NOP56YLR197W TSA1P34760 196 aaKnown RBP4.7□□□□□ -1.66
NOP56YLR197W SFB2P53953 876 aa4.7□□□□□ -1.66
NOP56YLR197W PLB2Q03674 706 aa4.7□□□□□ -1.66
NOP56YLR197W TAF8Q03750 510 aa4.7□□□□□ -1.66
NOP56YLR197W SGD1Q06132 899 aa4.7□□□□□ -1.66
NOP56YLR197W YTA7P40340 1379 aa4.7□□□□□ -1.66
NOP56YLR197W CAN1P04817 590 aa4.69□□□□□ -1.66
NOP56YLR197W SCT1P32784 759 aa4.69□□□□□ -1.66
NOP56YLR197W YKR078WP36158 585 aaKnown RBP4.69□□□□□ -1.66
NOP56YLR197W ECM21P38167 1117 aaKnown RBP4.69□□□□□ -1.66
NOP56YLR197W TSL1P38427 1098 aaKnown RBP4.69□□□□□ -1.66
NOP56YLR197W GGA2P38817 585 aaKnown RBP4.69□□□□□ -1.66
NOP56YLR197W LAM1P38851 1228 aa4.69□□□□□ -1.66
NOP56YLR197W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
NOP56YLR197W ROT1Q03691 256 aa4.69□□□□□ -1.66
NOP56YLR197W LCD1Q04377 747 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms