RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W TY1A-ML2P0CX76 440 aa5.18□□□□□ -1.58
SOF1YLL011W FUS1P11710 512 aa5.18□□□□□ -1.58
SOF1YLL011W RGP1P16664 663 aa5.18□□□□□ -1.58
SOF1YLL011W AEP2P22136 580 aa5.18□□□□□ -1.58
SOF1YLL011W GFD2P25370 566 aaKnown RBP5.18□□□□□ -1.58
SOF1YLL011W SLA1P32790 1244 aa5.18□□□□□ -1.58
SOF1YLL011W MPH1P40562 993 aa5.18□□□□□ -1.58
SOF1YLL011W RSC8P43609 557 aaKnown RBP5.18□□□□□ -1.58
SOF1YLL011W UBA2P52488 636 aa5.18□□□□□ -1.58
SOF1YLL011W PBP1P53297 722 aaKnown RBP5.18□□□□□ -1.58
SOF1YLL011W TY1A-GR1Q12085 440 aa5.18□□□□□ -1.58
SOF1YLL011W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.18□□□□□ -1.58
SOF1YLL011W TY1A-OLQ92392 440 aaKnown RBP5.18□□□□□ -1.58
SOF1YLL011W MYO2P19524 1574 aaKnown RBP5.17□□□□□ -1.58
SOF1YLL011W KCC4P25389 1037 aa5.17□□□□□ -1.58
SOF1YLL011W KTR4P38131 464 aa5.17□□□□□ -1.58
SOF1YLL011W DUG1P43616 481 aaKnown RBP5.17□□□□□ -1.58
SOF1YLL011W GUS1P46655 708 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
SOF1YLL011W NIT2P47016 307 aa5.17□□□□□ -1.58
SOF1YLL011W YML131WQ03102 365 aa5.17□□□□□ -1.58
SOF1YLL011W MLC2Q06580 163 aa5.17□□□□□ -1.58
SOF1YLL011W CHD1P32657 1468 aa5.16□□□□□ -1.58
SOF1YLL011W SCC2Q04002 1493 aa5.16□□□□□ -1.58
SOF1YLL011W ESP1Q03018 1630 aa5.16□□□□□ -1.58
SOF1YLL011W DBF20P32328 564 aa5.16□□□□□ -1.58
SOF1YLL011W PPH3P32345 308 aa5.16□□□□□ -1.58
SOF1YLL011W DAL3P32459 195 aa5.16□□□□□ -1.58
SOF1YLL011W SPC29P33419 253 aa5.16□□□□□ -1.58
SOF1YLL011W ADD66P36040 267 aa5.16□□□□□ -1.58
SOF1YLL011W YKL133CP36066 463 aa5.16□□□□□ -1.58
SOF1YLL011W NEM1P38757 446 aa5.16□□□□□ -1.58
SOF1YLL011W CKB2P38930 258 aa5.16□□□□□ -1.58
SOF1YLL011W RRP8P38961 392 aaKnown RBP5.16□□□□□ -1.58
SOF1YLL011W OAF1P39720 1047 aaPredicted RBP5.16□□□□□ -1.58
SOF1YLL011W TAF1P46677 1066 aa5.16□□□□□ -1.58
SOF1YLL011W YJL181WP46987 611 aa5.16□□□□□ -1.58
SOF1YLL011W HNT2P49775 206 aa5.16□□□□□ -1.58
SOF1YLL011W SNP1Q00916 300 aaPredicted RBP5.16□□□□□ -1.58
SOF1YLL011W SPO71Q03868 1245 aa5.16□□□□□ -1.58
SOF1YLL011W DUS3Q06053 668 aaKnown RBP5.16□□□□□ -1.58
SOF1YLL011W GUD1Q07729 489 aa5.16□□□□□ -1.58
SOF1YLL011W YTM1Q12024 460 aaPredicted RBP5.16□□□□□ -1.58
SOF1YLL011W MLS1P30952 554 aa5.15□□□□□ -1.58
SOF1YLL011W TOA1P32773 286 aa5.15□□□□□ -1.58
SOF1YLL011W YEL1P34225 687 aa5.15□□□□□ -1.58
SOF1YLL011W ERT1P38140 529 aa5.15□□□□□ -1.58
SOF1YLL011W YHL041WP38730 149 aa5.15□□□□□ -1.58
SOF1YLL011W SAP185P40856 1058 aa5.15□□□□□ -1.58
SOF1YLL011W TAN1P53072 289 aaPredicted RBP5.15□□□□□ -1.58
SOF1YLL011W HEH2Q03281 663 aa5.15□□□□□ -1.58
SOF1YLL011W UTP5Q04177 643 aaKnown RBP5.15□□□□□ -1.58
SOF1YLL011W PHM6Q05637 104 aa5.15□□□□□ -1.58
SOF1YLL011W PSR2Q07949 397 aa5.15□□□□□ -1.58
SOF1YLL011W YPK9Q12697 1472 aa5.15□□□□□ -1.59
SOF1YLL011W CDC25P04821 1589 aa5.14□□□□□ -1.59
SOF1YLL011W DNF1P32660 1571 aa5.14□□□□□ -1.59
SOF1YLL011W AFG2P32794 780 aa5.14□□□□□ -1.59
SOF1YLL011W MAL31P38156 614 aa5.14□□□□□ -1.59
SOF1YLL011W SIT1P39980 628 aa5.14□□□□□ -1.59
SOF1YLL011W HIS6P40545 261 aa5.14□□□□□ -1.59
SOF1YLL011W AAD14P42884 376 aa5.14□□□□□ -1.59
SOF1YLL011W SLS1P42900 643 aa5.14□□□□□ -1.59
SOF1YLL011W YJR124CP47159 448 aa5.14□□□□□ -1.59
SOF1YLL011W YOL087CQ99247 1116 aa5.14□□□□□ -1.59
SOF1YLL011W HTS1P07263 546 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W HSC82P15108 705 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W BLI1P35727 113 aa5.13□□□□□ -1.59
SOF1YLL011W JNM1P36224 373 aa5.13□□□□□ -1.59
SOF1YLL011W YRO2P38079 344 aa5.13□□□□□ -1.59
SOF1YLL011W ALG3P38179 458 aa5.13□□□□□ -1.59
SOF1YLL011W PRE3P38624 215 aa5.13□□□□□ -1.59
SOF1YLL011W PCM1P38628 557 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W YER156CP40093 338 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W GPP2P40106 250 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W NDE1P40215 560 aa5.13□□□□□ -1.59
SOF1YLL011W AIM14P53109 570 aa5.13□□□□□ -1.59
SOF1YLL011W YNR063WP53749 607 aa5.13□□□□□ -1.59
SOF1YLL011W SPP382Q06411 708 aaPredicted RBP5.13□□□□□ -1.59
SOF1YLL011W RSC2Q06488 889 aa5.13□□□□□ -1.59
SOF1YLL011W SNU66Q12420 587 aaPredicted RBP5.13□□□□□ -1.59
SOF1YLL011W RMP1Q12530 201 aa5.13□□□□□ -1.59
SOF1YLL011W RPO31P04051 1460 aa5.13□□□□□ -1.59
SOF1YLL011W FOB1O13329 566 aa5.13□□□□□ -1.59
SOF1YLL011W ARG82P07250 355 aa5.13□□□□□ -1.59
SOF1YLL011W YER152CP10356 443 aa5.13□□□□□ -1.59
SOF1YLL011W IDI1P15496 288 aa5.13□□□□□ -1.59
SOF1YLL011W RET1P22276 1149 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W UGA3P26370 528 aa5.13□□□□□ -1.59
SOF1YLL011W TFA2P36145 328 aa5.13□□□□□ -1.59
SOF1YLL011W NCL1P38205 684 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W MNT3P40549 630 aa5.13□□□□□ -1.59
SOF1YLL011W INP51P40559 946 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W GZF3P42944 551 aaKnown RBP5.13□□□□□ -1.59
SOF1YLL011W GYP8P43570 497 aa5.13□□□□□ -1.59
SOF1YLL011W REH1Q06709 432 aa5.13□□□□□ -1.59
SOF1YLL011W SSP2Q08646 371 aa5.13□□□□□ -1.59
SOF1YLL011W GNT1Q12096 491 aa5.13□□□□□ -1.59
SOF1YLL011W MCM10P32354 571 aa5.12□□□□□ -1.59
SOF1YLL011W DAL1P32375 460 aa5.12□□□□□ -1.59
SOF1YLL011W SCT1P32784 759 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms