RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C AFG2P32794 780 aa1.78□□□□□ -2.13
SET3YKR029C WHI3P34761 661 aaKnown RBP1.78□□□□□ -2.13
SET3YKR029C VBA5P36172 582 aa1.78□□□□□ -2.13
SET3YKR029C NMD2P38798 1089 aaKnown RBP1.78□□□□□ -2.13
SET3YKR029C RPN3P40016 523 aaKnown RBP1.78□□□□□ -2.13
SET3YKR029C MPH1P40562 993 aa1.78□□□□□ -2.13
SET3YKR029C FOL2P51601 243 aaKnown RBP1.78□□□□□ -2.13
SET3YKR029C ERP6P53198 216 aa1.78□□□□□ -2.13
SET3YKR029C TNA1P53322 534 aa1.78□□□□□ -2.13
SET3YKR029C YPL277CQ08989 487 aa1.78□□□□□ -2.13
SET3YKR029C HSP60P19882 572 aaKnown RBP1.77□□□□□ -2.13
SET3YKR029C ARE1P25628 610 aa1.77□□□□□ -2.13
SET3YKR029C CDC11P32458 415 aa1.77□□□□□ -2.13
SET3YKR029C YKL069WP36088 180 aa1.77□□□□□ -2.13
SET3YKR029C CCZ1P38273 704 aa1.77□□□□□ -2.13
SET3YKR029C YBR184WP38299 523 aa1.77□□□□□ -2.13
SET3YKR029C CHZ1P40019 153 aaPredicted RBP1.77□□□□□ -2.13
SET3YKR029C HUL4P40985 892 aa1.77□□□□□ -2.13
SET3YKR029C ALT1P52893 592 aa1.77□□□□□ -2.13
SET3YKR029C HUL5P53119 910 aa1.77□□□□□ -2.13
SET3YKR029C HOS3Q02959 697 aaKnown RBP1.77□□□□□ -2.13
SET3YKR029C FMP25Q08023 583 aa1.77□□□□□ -2.13
SET3YKR029C NBA1Q08229 501 aaKnown RBP1.77□□□□□ -2.13
SET3YKR029C PUS7Q08647 676 aaKnown RBP1.77□□□□□ -2.13
SET3YKR029C PPG1P32838 368 aa1.77□□□□□ -2.13
SET3YKR029C YJL045WP47052 634 aa1.77□□□□□ -2.13
SET3YKR029C YGR125WP53273 1036 aa1.77□□□□□ -2.13
SET3YKR029C RCM1P53972 490 aa1.77□□□□□ -2.13
SET3YKR029C SRP1Q02821 542 aaKnown RBP1.77□□□□□ -2.13
SET3YKR029C RPN4Q03465 531 aa1.77□□□□□ -2.13
SET3YKR029C EAF1Q06337 982 aa1.77□□□□□ -2.13
SET3YKR029C RSB1Q08417 382 aa1.77□□□□□ -2.13
SET3YKR029C CIT1P00890 479 aa1.76□□□□□ -2.13
SET3YKR029C SRO9P25567 434 aaKnown RBP1.76□□□□□ -2.13
SET3YKR029C RPL8BP29453 256 aaKnown RBP1.76□□□□□ -2.13
SET3YKR029C PPH3P32345 308 aa1.76□□□□□ -2.13
SET3YKR029C YSC84P32793 468 aa1.76□□□□□ -2.13
SET3YKR029C MDL2P33311 773 aa1.76□□□□□ -2.13
SET3YKR029C YHL012WP38709 493 aa1.76□□□□□ -2.13
SET3YKR029C GPB2P39717 880 aa1.76□□□□□ -2.13
SET3YKR029C GEM1P39722 662 aa1.76□□□□□ -2.13
SET3YKR029C ALR2P43553 858 aa1.76□□□□□ -2.13
SET3YKR029C UTP8P53276 713 aaKnown RBP1.76□□□□□ -2.13
SET3YKR029C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SET3YKR029C YDL124WQ07551 312 aaKnown RBP1.76□□□□□ -2.13
SET3YKR029C FLC1Q08967 793 aa1.76□□□□□ -2.13
SET3YKR029C YER152CP10356 443 aa1.75□□□□□ -2.13
SET3YKR029C AAR2P32357 355 aaPredicted RBP1.75□□□□□ -2.13
SET3YKR029C RRP14P36080 434 aaKnown RBP1.75□□□□□ -2.13
SET3YKR029C PBP2P38151 413 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
SET3YKR029C BRN1P38170 754 aa1.75□□□□□ -2.13
SET3YKR029C PNT1P38969 423 aa1.75□□□□□ -2.13
SET3YKR029C PIK1P39104 1066 aa1.75□□□□□ -2.13
SET3YKR029C MBP1P39678 833 aa1.75□□□□□ -2.13
SET3YKR029C ESC2Q06340 456 aa1.75□□□□□ -2.13
SET3YKR029C YDR306CQ06640 478 aa1.75□□□□□ -2.13
SET3YKR029C ACM1Q08981 209 aa1.75□□□□□ -2.13
SET3YKR029C YLR125WQ12138 136 aa1.75□□□□□ -2.13
SET3YKR029C ADE8P04161 214 aa1.75□□□□□ -2.13
SET3YKR029C RPL11AP0C0W9 174 aaKnown RBP1.75□□□□□ -2.13
SET3YKR029C STE5P32917 917 aa1.75□□□□□ -2.13
SET3YKR029C NMD3P38861 518 aaKnown RBP1.75□□□□□ -2.13
SET3YKR029C TAT2P38967 592 aa1.75□□□□□ -2.13
SET3YKR029C CCC2P38995 1004 aa1.75□□□□□ -2.13
SET3YKR029C MPT5P39016 859 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
SET3YKR029C RSP5P39940 809 aaKnown RBP1.75□□□□□ -2.13
SET3YKR029C SAH1P39954 449 aaKnown RBP1.75□□□□□ -2.13
SET3YKR029C RNH70P53331 553 aa1.75□□□□□ -2.13
SET3YKR029C POB3Q04636 552 aaKnown RBP1.75□□□□□ -2.13
SET3YKR029C DUS3Q06053 668 aaKnown RBP1.75□□□□□ -2.13
SET3YKR029C YPL066WQ12194 479 aa1.75□□□□□ -2.13
SET3YKR029C YVC1Q12324 675 aa1.75□□□□□ -2.13
SET3YKR029C RPL11BQ3E757 174 aaPredicted RBP1.75□□□□□ -2.13
SET3YKR029C MET6P05694 767 aaKnown RBP1.74□□□□□ -2.13
SET3YKR029C CIT2P08679 460 aa1.74□□□□□ -2.13
SET3YKR029C PHO8P11491 566 aa1.74□□□□□ -2.13
SET3YKR029C PRO1P32264 428 aa1.74□□□□□ -2.13
SET3YKR029C DOM34P33309 386 aa1.74□□□□□ -2.13
SET3YKR029C SIP5P40210 489 aaKnown RBP1.74□□□□□ -2.13
SET3YKR029C NUP82P40368 713 aa1.74□□□□□ -2.13
SET3YKR029C GUS1P46655 708 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SET3YKR029C ENV11P53246 860 aa1.74□□□□□ -2.13
SET3YKR029C EAR1Q03212 550 aa1.74□□□□□ -2.13
SET3YKR029C TRE1Q08919 783 aa1.74□□□□□ -2.13
SET3YKR029C RPS13P05756 151 aaKnown RBP1.74□□□□□ -2.13
SET3YKR029C PRE10P21242 288 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SET3YKR029C UGA2P38067 497 aa1.74□□□□□ -2.13
SET3YKR029C YRO2P38079 344 aa1.74□□□□□ -2.13
SET3YKR029C BAP2P38084 609 aa1.74□□□□□ -2.13
SET3YKR029C FPR3P38911 411 aaKnown RBP1.74□□□□□ -2.13
SET3YKR029C MXR1P40029 184 aa1.74□□□□□ -2.13
SET3YKR029C BUD6P41697 788 aa1.74□□□□□ -2.13
SET3YKR029C PFD1P46988 109 aa1.74□□□□□ -2.13
SET3YKR029C DOS2P54858 310 aa1.74□□□□□ -2.13
SET3YKR029C LGE1Q02796 332 aaKnown RBP1.74□□□□□ -2.13
SET3YKR029C UTP14Q04500 899 aaKnown RBP1.74□□□□□ -2.13
SET3YKR029C UBX5Q06682 500 aa1.74□□□□□ -2.13
SET3YKR029C YLL058WQ12198 575 aa1.74□□□□□ -2.13
SET3YKR029C CAN1P04817 590 aa1.73□□□□□ -2.13
SET3YKR029C TOM70P07213 617 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms