RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C PSF2P40359 213 aa5.96□□□□□ -1.45
VPS1YKR001C ALG2P43636 503 aa5.96□□□□□ -1.45
VPS1YKR001C JJJ2P46997 583 aa5.96□□□□□ -1.45
VPS1YKR001C NNT1Q05874 261 aa5.96□□□□□ -1.45
VPS1YKR001C RIO1Q12196 484 aaKnown RBP5.96□□□□□ -1.45
VPS1YKR001C YOL087CQ99247 1116 aa5.96□□□□□ -1.45
VPS1YKR001C VPS13Q07878 3144 aa5.96□□□□□ -1.45
VPS1YKR001C ADR1P07248 1323 aa5.96□□□□□ -1.46
VPS1YKR001C TUF1P02992 437 aaKnown RBP5.96□□□□□ -1.46
VPS1YKR001C SEN2P16658 377 aa5.96□□□□□ -1.46
VPS1YKR001C MRPL32P25348 183 aa5.96□□□□□ -1.46
VPS1YKR001C SPC72P39723 622 aa5.96□□□□□ -1.46
VPS1YKR001C TMN3P40071 706 aa5.96□□□□□ -1.46
VPS1YKR001C HGH1P48362 394 aaKnown RBP5.96□□□□□ -1.46
VPS1YKR001C PEX29Q03370 554 aa5.96□□□□□ -1.46
VPS1YKR001C PPM2Q08282 695 aa5.96□□□□□ -1.46
VPS1YKR001C AAD3P25612 363 aa5.95□□□□□ -1.46
VPS1YKR001C GRX7P38068 203 aa5.95□□□□□ -1.46
VPS1YKR001C GLO3P38682 493 aaKnown RBP5.95□□□□□ -1.46
VPS1YKR001C ARO80Q04052 950 aa5.95□□□□□ -1.46
VPS1YKR001C FUS2Q05670 677 aa5.95□□□□□ -1.46
VPS1YKR001C THI22Q06490 572 aa5.95□□□□□ -1.46
VPS1YKR001C DNL4Q08387 944 aaPredicted RBP5.95□□□□□ -1.46
VPS1YKR001C MRP7P12687 371 aa5.95□□□□□ -1.46
VPS1YKR001C ERG7P38604 731 aa5.95□□□□□ -1.46
VPS1YKR001C APE4P38821 490 aa5.95□□□□□ -1.46
VPS1YKR001C PEX18P38855 283 aa5.95□□□□□ -1.46
VPS1YKR001C DOT6P40059 670 aaKnown RBP5.95□□□□□ -1.46
VPS1YKR001C FMP10P40098 244 aa5.95□□□□□ -1.46
VPS1YKR001C EFM5P53200 248 aaKnown RBP5.95□□□□□ -1.46
VPS1YKR001C RAD33Q04231 177 aa5.95□□□□□ -1.46
VPS1YKR001C RTT109Q07794 436 aa5.95□□□□□ -1.46
VPS1YKR001C PRT1P06103 763 aaKnown RBP5.94□□□□□ -1.46
VPS1YKR001C HEM1P09950 548 aaPredicted RBP5.94□□□□□ -1.46
VPS1YKR001C PPG1P32838 368 aa5.94□□□□□ -1.46
VPS1YKR001C PTR2P32901 601 aa5.94□□□□□ -1.46
VPS1YKR001C GCD10P41814 478 aa5.94□□□□□ -1.46
VPS1YKR001C ACF4P47129 309 aa5.94□□□□□ -1.46
VPS1YKR001C SRB7P47822 140 aa5.94□□□□□ -1.46
VPS1YKR001C YGR016WP53209 190 aa5.94□□□□□ -1.46
VPS1YKR001C CWC21Q03375 135 aaKnown RBP5.94□□□□□ -1.46
VPS1YKR001C SWA2Q06677 668 aa5.94□□□□□ -1.46
VPS1YKR001C CIR2Q08822 631 aa5.94□□□□□ -1.46
VPS1YKR001C SEC8P32855 1065 aa5.93□□□□□ -1.46
VPS1YKR001C APD1P38281 316 aa5.93□□□□□ -1.46
VPS1YKR001C KEL1P38853 1164 aaKnown RBP5.93□□□□□ -1.46
VPS1YKR001C LSC1P53598 329 aaKnown RBP5.93□□□□□ -1.46
VPS1YKR001C EAR1Q03212 550 aa5.93□□□□□ -1.46
VPS1YKR001C VMS1Q04311 632 aaKnown RBP5.93□□□□□ -1.46
VPS1YKR001C YLH47Q06493 454 aa5.93□□□□□ -1.46
VPS1YKR001C GIC2Q06648 383 aa5.93□□□□□ -1.46
VPS1YKR001C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
VPS1YKR001C NET1P47035 1189 aa5.93□□□□□ -1.46
VPS1YKR001C VPS62P53285 467 aa5.93□□□□□ -1.46
VPS1YKR001C DCP2P53550 970 aaKnown RBP5.93□□□□□ -1.46
VPS1YKR001C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
VPS1YKR001C ECM11Q04110 302 aa5.93□□□□□ -1.46
VPS1YKR001C MDM36Q06820 579 aa5.93□□□□□ -1.46
VPS1YKR001C ACE2P21192 770 aa5.92□□□□□ -1.46
VPS1YKR001C RAD53P22216 821 aa5.92□□□□□ -1.46
VPS1YKR001C POL4P25615 582 aa5.92□□□□□ -1.46
VPS1YKR001C CDC48P25694 835 aaKnown RBP5.92□□□□□ -1.46
VPS1YKR001C LDH1P38139 375 aa5.92□□□□□ -1.46
VPS1YKR001C UBP14P38237 781 aaKnown RBP5.92□□□□□ -1.46
VPS1YKR001C PUS6P53294 404 aa5.92□□□□□ -1.46
VPS1YKR001C SRT1Q03175 343 aa5.92□□□□□ -1.46
VPS1YKR001C KIP2P28743 706 aa5.92□□□□□ -1.46
VPS1YKR001C IXR1P33417 597 aa5.92□□□□□ -1.46
VPS1YKR001C RRP1P35178 278 aaPredicted RBP5.92□□□□□ -1.46
VPS1YKR001C MNR2P35724 969 aa5.92□□□□□ -1.46
VPS1YKR001C SLX1P38324 304 aa5.92□□□□□ -1.46
VPS1YKR001C YPL191CQ08930 360 aa5.92□□□□□ -1.46
VPS1YKR001C YIG1Q08956 461 aa5.92□□□□□ -1.46
VPS1YKR001C RTC5Q12108 567 aaKnown RBP5.92□□□□□ -1.46
VPS1YKR001C MAK11P20484 414 aaKnown RBP5.91□□□□□ -1.46
VPS1YKR001C PLC1P32383 869 aa5.91□□□□□ -1.46
VPS1YKR001C VPH1P32563 840 aaKnown RBP5.91□□□□□ -1.46
VPS1YKR001C BUD2P33314 1104 aa5.91□□□□□ -1.46
VPS1YKR001C UIP5P36137 443 aa5.91□□□□□ -1.46
VPS1YKR001C MRPL40P36534 297 aa5.91□□□□□ -1.46
VPS1YKR001C TCD1P38756 429 aa5.91□□□□□ -1.46
VPS1YKR001C MAD1P40957 749 aa5.91□□□□□ -1.46
VPS1YKR001C YFH7P43591 353 aa5.91□□□□□ -1.46
VPS1YKR001C ATG1P53104 897 aa5.91□□□□□ -1.46
VPS1YKR001C HOL1P53389 586 aa5.91□□□□□ -1.46
VPS1YKR001C NOP15P53927 220 aaPredicted RBP5.91□□□□□ -1.46
VPS1YKR001C KAR5Q04746 504 aa5.91□□□□□ -1.46
VPS1YKR001C RKM1Q08961 583 aaPredicted RBP5.91□□□□□ -1.46
VPS1YKR001C YPL277CQ08989 487 aa5.91□□□□□ -1.46
VPS1YKR001C TY3A-GQ12173 290 aa5.91□□□□□ -1.46
VPS1YKR001C TY3A-IQ99219 290 aa5.91□□□□□ -1.46
VPS1YKR001C DIT1P21623 536 aa5.9□□□□□ -1.46
VPS1YKR001C MIA40P36046 403 aa5.9□□□□□ -1.46
VPS1YKR001C HSE1P38753 452 aa5.9□□□□□ -1.46
VPS1YKR001C CAJ1P39101 391 aa5.9□□□□□ -1.46
VPS1YKR001C RIO2P40160 425 aaKnown RBP5.9□□□□□ -1.46
VPS1YKR001C ADA2Q02336 434 aa5.9□□□□□ -1.46
VPS1YKR001C UTP13Q05946 817 aaKnown RBP5.9□□□□□ -1.46
VPS1YKR001C TEF1P02994 458 aaKnown RBP5.9□□□□□ -1.47
VPS1YKR001C TOM70P07213 617 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms