RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W GPP2P40106 250 aaKnown RBP4.37□□□□□ -1.71
UBP12YJL197W CAF16P43569 289 aa4.37□□□□□ -1.71
UBP12YJL197W MNN11P46985 422 aaKnown RBP4.37□□□□□ -1.71
UBP12YJL197W PSH1Q12161 406 aa4.37□□□□□ -1.71
UBP12YJL197W RMP1Q12530 201 aa4.37□□□□□ -1.71
UBP12YJL197W HVG1P0CE11 249 aa4.37□□□□□ -1.71
UBP12YJL197W STO1P34160 861 aaKnown RBP4.37□□□□□ -1.71
UBP12YJL197W MAL31P38156 614 aa4.37□□□□□ -1.71
UBP12YJL197W VTC4P47075 721 aa4.37□□□□□ -1.71
UBP12YJL197W LCD1Q04377 747 aa4.37□□□□□ -1.71
UBP12YJL197W YDR306CQ06640 478 aa4.37□□□□□ -1.71
UBP12YJL197W GUD1Q07729 489 aa4.37□□□□□ -1.71
UBP12YJL197W MCM7P38132 845 aa4.37□□□□□ -1.71
UBP12YJL197W SIP5P40210 489 aaKnown RBP4.37□□□□□ -1.71
UBP12YJL197W RAD18P10862 487 aa4.36□□□□□ -1.71
UBP12YJL197W PHO81P17442 1178 aa4.36□□□□□ -1.71
UBP12YJL197W DBF20P32328 564 aa4.36□□□□□ -1.71
UBP12YJL197W DAL1P32375 460 aa4.36□□□□□ -1.71
UBP12YJL197W DID4P36108 232 aa4.36□□□□□ -1.71
UBP12YJL197W YBR284WP38150 797 aa4.36□□□□□ -1.71
UBP12YJL197W NEW1Q08972 1196 aaKnown RBP4.36□□□□□ -1.71
UBP12YJL197W RET1P22276 1149 aaKnown RBP4.36□□□□□ -1.71
UBP12YJL197W SLA1P32790 1244 aa4.36□□□□□ -1.71
UBP12YJL197W APL2P36000 726 aaPredicted RBP4.36□□□□□ -1.71
UBP12YJL197W PCM1P38628 557 aaKnown RBP4.36□□□□□ -1.71
UBP12YJL197W RAT1Q02792 1006 aaKnown RBP4.36□□□□□ -1.71
UBP12YJL197W SNU66Q12420 587 aaPredicted RBP4.36□□□□□ -1.71
UBP12YJL197W UTP5Q04177 643 aaKnown RBP4.36□□□□□ -1.71
UBP12YJL197W YOL087CQ99247 1116 aa4.36□□□□□ -1.71
UBP12YJL197W PHR1P05066 565 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
UBP12YJL197W TFC3P34111 1160 aa4.35□□□□□ -1.71
UBP12YJL197W XDJ1P39102 459 aa4.35□□□□□ -1.71
UBP12YJL197W PPT1P53043 513 aa4.35□□□□□ -1.71
UBP12YJL197W ATP25Q03153 612 aa4.35□□□□□ -1.71
UBP12YJL197W SSP2Q08646 371 aa4.35□□□□□ -1.71
UBP12YJL197W HTS1P07263 546 aaKnown RBP4.35□□□□□ -1.71
UBP12YJL197W HEM12P32347 362 aaPredicted RBP4.35□□□□□ -1.71
UBP12YJL197W NCL1P38205 684 aaKnown RBP4.35□□□□□ -1.71
UBP12YJL197W BIT2P38346 545 aa4.35□□□□□ -1.71
UBP12YJL197W HEH2Q03281 663 aa4.35□□□□□ -1.71
UBP12YJL197W ADE8P04161 214 aa4.35□□□□□ -1.71
UBP12YJL197W DED1P06634 604 aaKnown RBP4.35□□□□□ -1.71
UBP12YJL197W YER152CP10356 443 aa4.35□□□□□ -1.71
UBP12YJL197W NEM1P38757 446 aa4.35□□□□□ -1.71
UBP12YJL197W HIS6P40545 261 aa4.35□□□□□ -1.71
UBP12YJL197W MNT3P40549 630 aa4.35□□□□□ -1.71
UBP12YJL197W IML2P47031 731 aa4.35□□□□□ -1.71
UBP12YJL197W DAM1P53267 343 aa4.35□□□□□ -1.71
UBP12YJL197W MED1Q12321 566 aa4.35□□□□□ -1.71
UBP12YJL197W ARG82P07250 355 aa4.34□□□□□ -1.71
UBP12YJL197W CHS3P29465 1165 aa4.34□□□□□ -1.71
UBP12YJL197W UBA2P52488 636 aa4.34□□□□□ -1.71
UBP12YJL197W YPR071WQ12346 211 aa4.34□□□□□ -1.71
UBP12YJL197W TY1A-DR3Q12441 440 aa4.34□□□□□ -1.71
UBP12YJL197W OPI1P21957 404 aa4.34□□□□□ -1.71
UBP12YJL197W HOG1P32485 435 aa4.34□□□□□ -1.71
UBP12YJL197W TMA108P40462 946 aa4.34□□□□□ -1.71
UBP12YJL197W SLD3P53135 668 aa4.34□□□□□ -1.71
UBP12YJL197W HED1Q03937 162 aa4.34□□□□□ -1.71
UBP12YJL197W DUS3Q06053 668 aaKnown RBP4.34□□□□□ -1.71
UBP12YJL197W PEX15Q08215 383 aa4.34□□□□□ -1.71
UBP12YJL197W MCM10P32354 571 aa4.34□□□□□ -1.72
UBP12YJL197W AFG2P32794 780 aa4.34□□□□□ -1.72
UBP12YJL197W CCT5P40413 562 aaKnown RBP4.34□□□□□ -1.72
UBP12YJL197W ESL1P40456 1118 aa4.34□□□□□ -1.72
UBP12YJL197W YNR040WP53736 256 aa4.34□□□□□ -1.72
UBP12YJL197W YIG1Q08956 461 aa4.34□□□□□ -1.72
UBP12YJL197W TY1A-LR4P0C2I8 440 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W TY1A-DR6P0CX70 440 aa4.33□□□□□ -1.72
UBP12YJL197W TY1A-ER1P0CX71 440 aa4.33□□□□□ -1.72
UBP12YJL197W TY1A-LR2P0CX72 440 aa4.33□□□□□ -1.72
UBP12YJL197W TY1A-PLP0CX73 440 aa4.33□□□□□ -1.72
UBP12YJL197W TY1A-JR1P0CX74 440 aa4.33□□□□□ -1.72
UBP12YJL197W TY1A-LR3P0CX75 440 aa4.33□□□□□ -1.72
UBP12YJL197W TY1A-ML2P0CX76 440 aa4.33□□□□□ -1.72
UBP12YJL197W PPH3P32345 308 aa4.33□□□□□ -1.72
UBP12YJL197W YGR283CP53336 341 aaPredicted RBP4.33□□□□□ -1.72
UBP12YJL197W BIO5P53744 561 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W SRP1Q02821 542 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W TY1A-GR1Q12085 440 aa4.33□□□□□ -1.72
UBP12YJL197W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W TY1A-OLQ92392 440 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W TY4B-PA0A0B7P3V8 1104 aa4.33□□□□□ -1.72
UBP12YJL197W MSS18P08593 268 aa4.33□□□□□ -1.72
UBP12YJL197W EMC3P36039 253 aa4.33□□□□□ -1.72
UBP12YJL197W NDE1P40215 560 aa4.33□□□□□ -1.72
UBP12YJL197W FET4P40988 552 aa4.33□□□□□ -1.72
UBP12YJL197W AAD14P42884 376 aa4.33□□□□□ -1.72
UBP12YJL197W CCM1P48237 864 aaPredicted RBP4.33□□□□□ -1.72
UBP12YJL197W UTP22P53254 1237 aaPredicted RBP4.33□□□□□ -1.72
UBP12YJL197W CNM67P53865 581 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W SKY1Q03656 742 aa4.33□□□□□ -1.72
UBP12YJL197W SXM1Q04175 944 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W SPP382Q06411 708 aaPredicted RBP4.33□□□□□ -1.72
UBP12YJL197W TY4A-HQ6Q5P6 413 aa4.33□□□□□ -1.72
UBP12YJL197W KTR4P38131 464 aa4.33□□□□□ -1.72
UBP12YJL197W ATG14P38270 344 aa4.33□□□□□ -1.72
UBP12YJL197W INP51P40559 946 aaKnown RBP4.33□□□□□ -1.72
UBP12YJL197W SOG2Q08817 791 aa4.33□□□□□ -1.72
UBP12YJL197W CLF1Q12309 687 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms