RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W PNT1P38969 423 aa3.6□□□□□ -1.83
MSL1YIR009W GEM1P39722 662 aa3.6□□□□□ -1.83
MSL1YIR009W RRT14P40470 206 aa3.6□□□□□ -1.83
MSL1YIR009W YAP6Q03935 383 aa3.6□□□□□ -1.83
MSL1YIR009W TMA10Q06177 86 aa3.6□□□□□ -1.83
MSL1YIR009W HMI1Q12039 706 aa3.6□□□□□ -1.83
MSL1YIR009W TRP2P00899 507 aaKnown RBP3.59□□□□□ -1.83
MSL1YIR009W LYP1P32487 611 aa3.59□□□□□ -1.83
MSL1YIR009W TRM2P33753 639 aa3.59□□□□□ -1.83
MSL1YIR009W MNN10P50108 393 aaKnown RBP3.59□□□□□ -1.83
MSL1YIR009W HFM1P51979 1187 aa3.59□□□□□ -1.83
MSL1YIR009W GTF1P53260 183 aaPredicted RBP3.59□□□□□ -1.83
MSL1YIR009W EEB1Q02891 456 aa3.59□□□□□ -1.83
MSL1YIR009W EMC1P25574 760 aa3.58□□□□□ -1.84
MSL1YIR009W ASF1P32447 279 aa3.58□□□□□ -1.84
MSL1YIR009W GCV2P49095 1034 aa3.58□□□□□ -1.84
MSL1YIR009W MTC3P53077 123 aa3.58□□□□□ -1.84
MSL1YIR009W MCM6P53091 1017 aaKnown RBP3.58□□□□□ -1.84
MSL1YIR009W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
MSL1YIR009W YLR224WQ05947 369 aa3.58□□□□□ -1.84
MSL1YIR009W PUS9Q12069 462 aa3.58□□□□□ -1.84
MSL1YIR009W YPL066WQ12194 479 aa3.58□□□□□ -1.84
MSL1YIR009W PNS1Q12412 539 aa3.58□□□□□ -1.84
MSL1YIR009W THS1P04801 734 aaKnown RBP3.57□□□□□ -1.84
MSL1YIR009W INO1P11986 533 aa3.57□□□□□ -1.84
MSL1YIR009W CDC34P14682 295 aa3.57□□□□□ -1.84
MSL1YIR009W HCM1P25364 564 aa3.57□□□□□ -1.84
MSL1YIR009W MET10P39692 1035 aa3.57□□□□□ -1.84
MSL1YIR009W MND2P40577 368 aa3.57□□□□□ -1.84
MSL1YIR009W OYE2Q03558 400 aaKnown RBP3.57□□□□□ -1.84
MSL1YIR009W SPP382Q06411 708 aaPredicted RBP3.57□□□□□ -1.84
MSL1YIR009W NOP12Q08208 459 aaKnown RBP3.57□□□□□ -1.84
MSL1YIR009W NTO1Q12311 748 aa3.57□□□□□ -1.84
MSL1YIR009W PET112P33893 541 aa3.56□□□□□ -1.84
MSL1YIR009W MOT2P34909 587 aaKnown RBP3.56□□□□□ -1.84
MSL1YIR009W SIP5P40210 489 aaKnown RBP3.56□□□□□ -1.84
MSL1YIR009W TYW3P53177 273 aa3.56□□□□□ -1.84
MSL1YIR009W ADY3Q07732 790 aa3.56□□□□□ -1.84
MSL1YIR009W TPO1Q07824 586 aa3.56□□□□□ -1.84
MSL1YIR009W XYL2Q07993 356 aa3.56□□□□□ -1.84
MSL1YIR009W RKM4Q12504 494 aa3.56□□□□□ -1.84
MSL1YIR009W PMA1P05030 918 aaKnown RBP3.55□□□□□ -1.84
MSL1YIR009W MSE1P48525 536 aa3.55□□□□□ -1.84
MSL1YIR009W PHO23P50947 330 aa3.55□□□□□ -1.84
MSL1YIR009W SLI1P53304 468 aa3.55□□□□□ -1.84
MSL1YIR009W PMI40P29952 429 aaKnown RBP3.54□□□□□ -1.84
MSL1YIR009W DCG1P32460 244 aa3.54□□□□□ -1.84
MSL1YIR009W YKL107WP34251 309 aa3.54□□□□□ -1.84
MSL1YIR009W MNR2P35724 969 aa3.54□□□□□ -1.84
MSL1YIR009W YKL151CP36059 337 aa3.54□□□□□ -1.84
MSL1YIR009W PLB1P39105 664 aa3.54□□□□□ -1.84
MSL1YIR009W ZRG8P40021 1076 aa3.54□□□□□ -1.84
MSL1YIR009W MET12P46151 657 aa3.54□□□□□ -1.84
MSL1YIR009W YGL176CP46945 554 aa3.54□□□□□ -1.84
MSL1YIR009W SUN4P53616 420 aa3.54□□□□□ -1.84
MSL1YIR009W HIS5P07172 385 aa3.53□□□□□ -1.84
MSL1YIR009W POA1P38218 177 aa3.53□□□□□ -1.84
MSL1YIR009W YAP1801P38856 637 aa3.53□□□□□ -1.84
MSL1YIR009W CHA4P43634 648 aa3.53□□□□□ -1.84
MSL1YIR009W GIS1Q03833 894 aa3.53□□□□□ -1.84
MSL1YIR009W HRQ1Q05549 1077 aa3.53□□□□□ -1.84
MSL1YIR009W YLL058WQ12198 575 aa3.53□□□□□ -1.84
MSL1YIR009W DEF1P35732 738 aaKnown RBP3.52□□□□□ -1.85
MSL1YIR009W AIM21P40563 679 aa3.52□□□□□ -1.85
MSL1YIR009W YGR053CP53234 283 aa3.52□□□□□ -1.85
MSL1YIR009W SPO20Q04359 397 aa3.52□□□□□ -1.85
MSL1YIR009W YLR225CQ05948 407 aaKnown RBP3.52□□□□□ -1.85
MSL1YIR009W CDA1Q06702 301 aa3.52□□□□□ -1.85
MSL1YIR009W MDM38Q08179 573 aa3.52□□□□□ -1.85
MSL1YIR009W OSW2Q12202 724 aa3.52□□□□□ -1.85
MSL1YIR009W ENA1P13587 1091 aa3.51□□□□□ -1.85
MSL1YIR009W CHS7P38843 316 aa3.51□□□□□ -1.85
MSL1YIR009W EXG2P52911 562 aa3.51□□□□□ -1.85
MSL1YIR009W YGR012WP53206 393 aa3.51□□□□□ -1.85
MSL1YIR009W ENA2Q01896 1091 aa3.51□□□□□ -1.85
MSL1YIR009W ESC2Q06340 456 aa3.51□□□□□ -1.85
MSL1YIR009W URN1Q06525 465 aaKnown RBP3.51□□□□□ -1.85
MSL1YIR009W ENA5Q12691 1091 aa3.51□□□□□ -1.85
MSL1YIR009W TAD3Q9URQ3 322 aa3.51□□□□□ -1.85
MSL1YIR009W RPP2AP05319 106 aaKnown RBP3.5□□□□□ -1.85
MSL1YIR009W ECM21P38167 1117 aaKnown RBP3.5□□□□□ -1.85
MSL1YIR009W GIC1P38785 314 aa3.5□□□□□ -1.85
MSL1YIR009W MSS4P38994 779 aa3.5□□□□□ -1.85
MSL1YIR009W FAA4P47912 694 aaKnown RBP3.5□□□□□ -1.85
MSL1YIR009W CTF4Q01454 927 aa3.5□□□□□ -1.85
MSL1YIR009W KIN4Q01919 800 aa3.5□□□□□ -1.85
MSL1YIR009W SRT1Q03175 343 aa3.5□□□□□ -1.85
MSL1YIR009W SPE1P08432 466 aa3.49□□□□□ -1.85
MSL1YIR009W FUN30P31380 1131 aa3.49□□□□□ -1.85
MSL1YIR009W ABD1P32783 436 aaPredicted RBP3.49□□□□□ -1.85
MSL1YIR009W SRP101P32916 621 aa3.49□□□□□ -1.85
MSL1YIR009W PIN4P34217 668 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
MSL1YIR009W NPP2P39997 493 aa3.49□□□□□ -1.85
MSL1YIR009W IOC3P43596 787 aa3.49□□□□□ -1.85
MSL1YIR009W KCS1Q12494 1050 aa3.49□□□□□ -1.85
MSL1YIR009W HSF1P10961 833 aa3.48□□□□□ -1.85
MSL1YIR009W SNF7P39929 240 aaKnown RBP3.48□□□□□ -1.85
MSL1YIR009W CDC12P32468 407 aaKnown RBP3.47□□□□□ -1.85
MSL1YIR009W SAH1P39954 449 aaKnown RBP3.47□□□□□ -1.85
MSL1YIR009W URM1P40554 99 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms