RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	PEX14	P53112	341 aa		5.26	□□□□□ -1.57
VMA22	YHR060W	UTP22	P53254	1237 aa	Predicted RBP	5.26	□□□□□ -1.57
VMA22	YHR060W	ROD1	Q02805	837 aa		5.26	□□□□□ -1.57
VMA22	YHR060W	COG4	Q06096	861 aa		5.26	□□□□□ -1.57
VMA22	YHR060W	BRE1	Q07457	700 aa	Known RBP	5.26	□□□□□ -1.57
VMA22	YHR060W	YDR215C	Q12240	137 aa		5.26	□□□□□ -1.57
VMA22	YHR060W	AI3	P03877	415 aa		5.25	□□□□□ -1.57
VMA22	YHR060W	DBP5	P20449	482 aa	Known RBP	5.25	□□□□□ -1.57
VMA22	YHR060W	RPN12	P32496	274 aa		5.25	□□□□□ -1.57
VMA22	YHR060W	ARL1	P38116	183 aa	Known RBP	5.25	□□□□□ -1.57
VMA22	YHR060W	YGL176C	P46945	554 aa		5.25	□□□□□ -1.57
VMA22	YHR060W	YJR120W	P47157	116 aa		5.25	□□□□□ -1.57
VMA22	YHR060W	PAP2	P53632	584 aa	Known RBP	5.25	□□□□□ -1.57
VMA22	YHR060W	ESF2	P53743	316 aa	Known RBP	5.25	□□□□□ -1.57
VMA22	YHR060W	MTC5	Q03897	1148 aa		5.25	□□□□□ -1.57
VMA22	YHR060W	TIF35	Q04067	274 aa	Known RBP	5.25	□□□□□ -1.57
VMA22	YHR060W	HBN1	Q96VH4	193 aa		5.25	□□□□□ -1.57
VMA22	YHR060W	MRS6	P32864	603 aa	Known RBP	5.24	□□□□□ -1.57
VMA22	YHR060W	ADD66	P36040	267 aa		5.24	□□□□□ -1.57
VMA22	YHR060W	TYS1	P36421	394 aa	Known RBP	5.24	□□□□□ -1.57
VMA22	YHR060W	BAP2	P38084	609 aa		5.24	□□□□□ -1.57
VMA22	YHR060W	MCM7	P38132	845 aa		5.24	□□□□□ -1.57
VMA22	YHR060W	MAL11	P53048	616 aa		5.24	□□□□□ -1.57
VMA22	YHR060W	UBX4	P54730	416 aa		5.24	□□□□□ -1.57
VMA22	YHR060W	MEC3	Q02574	474 aa		5.24	□□□□□ -1.57
VMA22	YHR060W	YMR074C	Q04773	145 aa		5.24	□□□□□ -1.57
VMA22	YHR060W	DED1	P06634	604 aa	Known RBP	5.23	□□□□□ -1.57
VMA22	YHR060W	YCK2	P23292	546 aa	Known RBP	5.23	□□□□□ -1.57
VMA22	YHR060W	AAR2	P32357	355 aa	Predicted RBP	5.23	□□□□□ -1.57
VMA22	YHR060W	EUG1	P32474	517 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	MNN4	P36044	1178 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	MBP1	P39678	833 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	UBP6	P43593	499 aa	Known RBP	5.23	□□□□□ -1.57
VMA22	YHR060W	PRY1	P47032	299 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	ARI1	P53111	347 aa	Known RBP	5.23	□□□□□ -1.57
VMA22	YHR060W	MDG1	P53885	366 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	COG6	P53959	839 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	RKM2	Q03942	479 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	YLR001C	Q07895	862 aa		5.23	□□□□□ -1.57
VMA22	YHR060W	TY1A-NL1	Q12391	440 aa	Known RBP	5.23	□□□□□ -1.57
VMA22	YHR060W	SST2	P11972	698 aa	Known RBP	5.22	□□□□□ -1.57
VMA22	YHR060W	PGI1	P12709	554 aa	Known RBP	5.22	□□□□□ -1.57
VMA22	YHR060W	RAD53	P22216	821 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	EXO5	P38289	585 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	RIM4	P38741	713 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	SLN1	P39928	1220 aa	Predicted RBP	5.22	□□□□□ -1.57
VMA22	YHR060W	MGS1	P40151	587 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	ALG2	P43636	503 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	TAN1	P53072	289 aa	Predicted RBP	5.22	□□□□□ -1.57
VMA22	YHR060W	KIP3	P53086	805 aa	Known RBP	5.22	□□□□□ -1.57
VMA22	YHR060W	COG8	Q04632	607 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	YDR306C	Q06640	478 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	PSR2	Q07949	397 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	YOR223W	Q12015	292 aa		5.22	□□□□□ -1.57
VMA22	YHR060W	HEM13	P11353	328 aa	Known RBP	5.21	□□□□□ -1.58
VMA22	YHR060W	RPA135	P22138	1203 aa	Known RBP	5.21	□□□□□ -1.58
VMA22	YHR060W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
VMA22	YHR060W	VBA3	P25594	458 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	PPH3	P32345	308 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	HBS1	P32769	611 aa	Known RBP	5.21	□□□□□ -1.58
VMA22	YHR060W	RGD1	P38339	666 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	IES1	P43579	692 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	GPG1	P53130	126 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	ENT2	Q05785	613 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	AOS1	Q06624	347 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	GAS5	Q08193	484 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	GNT1	Q12096	491 aa		5.21	□□□□□ -1.58
VMA22	YHR060W	ADE8	P04161	214 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	ERS1	P17261	260 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	MEF1	P25039	761 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	PTP2	P29461	750 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	YKL133C	P36066	463 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	PET10	P36139	283 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	REI1	P38344	393 aa	Predicted RBP	5.2	□□□□□ -1.58
VMA22	YHR060W	SAH1	P39954	449 aa	Known RBP	5.2	□□□□□ -1.58
VMA22	YHR060W	SIT1	P39980	628 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	IES5	P40060	125 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
VMA22	YHR060W	CCT8	P47079	568 aa	Known RBP	5.2	□□□□□ -1.58
VMA22	YHR060W	PIP2	P52960	996 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	NCE103	P53615	221 aa		5.2	□□□□□ -1.58
VMA22	YHR060W	GIR2	Q03768	265 aa	Predicted RBP	5.2	□□□□□ -1.58
VMA22	YHR060W	SPP382	Q06411	708 aa	Predicted RBP	5.2	□□□□□ -1.58
VMA22	YHR060W	RRP6	Q12149	733 aa	Known RBP	5.2	□□□□□ -1.58
VMA22	YHR060W	AEP2	P22136	580 aa		5.19	□□□□□ -1.58
VMA22	YHR060W	SSH4	P32343	579 aa		5.19	□□□□□ -1.58
VMA22	YHR060W	GPP1	P41277	250 aa	Known RBP	5.19	□□□□□ -1.58
VMA22	YHR060W	SEC26	P41810	973 aa	Known RBP	5.19	□□□□□ -1.58
VMA22	YHR060W	DUG1	P43616	481 aa	Known RBP	5.19	□□□□□ -1.58
VMA22	YHR060W	RAT1	Q02792	1006 aa	Known RBP	5.19	□□□□□ -1.58
VMA22	YHR060W	YPL034W	Q03083	165 aa		5.19	□□□□□ -1.58
VMA22	YHR060W	MTQ2	Q03920	221 aa	Predicted RBP	5.19	□□□□□ -1.58
VMA22	YHR060W	UTP5	Q04177	643 aa	Known RBP	5.19	□□□□□ -1.58
VMA22	YHR060W	LAP2	Q10740	671 aa		5.19	□□□□□ -1.58
VMA22	YHR060W	YTM1	Q12024	460 aa	Predicted RBP	5.19	□□□□□ -1.58
VMA22	YHR060W	YPL066W	Q12194	479 aa		5.19	□□□□□ -1.58
VMA22	YHR060W	MPD2	Q99316	277 aa		5.19	□□□□□ -1.58
VMA22	YHR060W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
VMA22	YHR060W	TOP3	P13099	656 aa		5.18	□□□□□ -1.58
VMA22	YHR060W	MSD1	P15179	658 aa	Known RBP	5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 74.7 ms