RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W ATG11Q12527 1178 aa5.59□□□□□ -1.51
VPS29YHR012W UBR2Q07963 1872 aa5.59□□□□□ -1.51
VPS29YHR012W SPT2P06843 333 aaPredicted RBP5.58□□□□□ -1.52
VPS29YHR012W FUB1P25659 250 aa5.58□□□□□ -1.52
VPS29YHR012W IMP2'P32351 346 aa5.58□□□□□ -1.52
VPS29YHR012W UGA4P32837 571 aa5.58□□□□□ -1.52
VPS29YHR012W BUD2P33314 1104 aa5.58□□□□□ -1.52
VPS29YHR012W TVP38P36164 337 aa5.58□□□□□ -1.52
VPS29YHR012W AAP1P37898 856 aaKnown RBP5.58□□□□□ -1.52
VPS29YHR012W YHR131CP38835 850 aa5.58□□□□□ -1.52
VPS29YHR012W SCS3P53012 380 aa5.58□□□□□ -1.52
VPS29YHR012W TFC6Q06339 672 aa5.58□□□□□ -1.52
VPS29YHR012W SUE1Q06524 206 aa5.58□□□□□ -1.52
VPS29YHR012W YDR461C-AQ2V2P7 80 aa5.58□□□□□ -1.52
VPS29YHR012W MOT1P32333 1867 aa5.58□□□□□ -1.52
VPS29YHR012W PHR1P05066 565 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
VPS29YHR012W SRP54P20424 541 aaKnown RBP5.57□□□□□ -1.52
VPS29YHR012W PEP3P27801 918 aa5.57□□□□□ -1.52
VPS29YHR012W CLB5P30283 435 aa5.57□□□□□ -1.52
VPS29YHR012W SMY2P32909 740 aaKnown RBP5.57□□□□□ -1.52
VPS29YHR012W FLR1P38124 548 aa5.57□□□□□ -1.52
VPS29YHR012W SVF1Q05515 481 aa5.57□□□□□ -1.52
VPS29YHR012W POL3P15436 1097 aa5.56□□□□□ -1.52
VPS29YHR012W RNR3P21672 869 aaKnown RBP5.56□□□□□ -1.52
VPS29YHR012W PAN5P38787 379 aa5.56□□□□□ -1.52
VPS29YHR012W CCT3P39077 534 aaKnown RBP5.56□□□□□ -1.52
VPS29YHR012W VPS70P47161 811 aa5.56□□□□□ -1.52
VPS29YHR012W RPS7BP48164 190 aaKnown RBP5.56□□□□□ -1.52
VPS29YHR012W YGR035CP53222 116 aa5.56□□□□□ -1.52
VPS29YHR012W YNL115CP53925 644 aa5.56□□□□□ -1.52
VPS29YHR012W HDA1P53973 706 aa5.56□□□□□ -1.52
VPS29YHR012W YDL176WQ12027 708 aa5.56□□□□□ -1.52
VPS29YHR012W CIT1P00890 479 aa5.55□□□□□ -1.52
VPS29YHR012W UBC1P21734 215 aaKnown RBP5.55□□□□□ -1.52
VPS29YHR012W DMA1P38823 416 aa5.55□□□□□ -1.52
VPS29YHR012W ORC6P38826 435 aa5.55□□□□□ -1.52
VPS29YHR012W YEL025CP39991 1188 aa5.55□□□□□ -1.52
VPS29YHR012W CSM2P40465 213 aa5.55□□□□□ -1.52
VPS29YHR012W OYE3P41816 400 aaPredicted RBP5.55□□□□□ -1.52
VPS29YHR012W PSP2P50109 593 aaKnown RBP5.55□□□□□ -1.52
VPS29YHR012W HST3P53687 447 aa5.55□□□□□ -1.52
VPS29YHR012W HEH2Q03281 663 aa5.55□□□□□ -1.52
VPS29YHR012W YDR341CQ05506 607 aaKnown RBP5.55□□□□□ -1.52
VPS29YHR012W MMR1Q06324 491 aa5.55□□□□□ -1.52
VPS29YHR012W ARP6Q12509 438 aa5.55□□□□□ -1.52
VPS29YHR012W YDR034W-BQ6Q5X2 51 aa5.55□□□□□ -1.52
VPS29YHR012W SRO9P25567 434 aaKnown RBP5.54□□□□□ -1.52
VPS29YHR012W SYN8P31377 255 aa5.54□□□□□ -1.52
VPS29YHR012W MSS51P32335 436 aa5.54□□□□□ -1.52
VPS29YHR012W OPY1P38271 328 aa5.54□□□□□ -1.52
VPS29YHR012W SUL1P38359 859 aa5.54□□□□□ -1.52
VPS29YHR012W CIC1P38779 376 aaKnown RBP5.54□□□□□ -1.52
VPS29YHR012W SPO22P40511 975 aa5.54□□□□□ -1.52
VPS29YHR012W ASE1P50275 885 aa5.54□□□□□ -1.52
VPS29YHR012W ZPR1P53303 486 aaKnown RBP5.54□□□□□ -1.52
VPS29YHR012W CNM67P53865 581 aaKnown RBP5.54□□□□□ -1.52
VPS29YHR012W CSM3Q04659 317 aa5.54□□□□□ -1.52
VPS29YHR012W PHM6Q05637 104 aa5.54□□□□□ -1.52
VPS29YHR012W YPR148CQ06523 435 aa5.54□□□□□ -1.52
VPS29YHR012W MSD1P15179 658 aaKnown RBP5.53□□□□□ -1.52
VPS29YHR012W SAS3P34218 831 aa5.53□□□□□ -1.52
VPS29YHR012W ISW1P38144 1129 aa5.53□□□□□ -1.52
VPS29YHR012W LEO1P38439 464 aa5.53□□□□□ -1.52
VPS29YHR012W NDT80P38830 627 aa5.53□□□□□ -1.52
VPS29YHR012W TVP23P38962 199 aa5.53□□□□□ -1.52
VPS29YHR012W CUS1Q02554 436 aaPredicted RBP5.53□□□□□ -1.52
VPS29YHR012W OYE2Q03558 400 aaKnown RBP5.53□□□□□ -1.52
VPS29YHR012W SPO71Q03868 1245 aa5.53□□□□□ -1.52
VPS29YHR012W OXR1Q08952 273 aa5.53□□□□□ -1.52
VPS29YHR012W DAP1Q12091 152 aa5.53□□□□□ -1.52
VPS29YHR012W YOR111WQ99210 232 aa5.53□□□□□ -1.52
VPS29YHR012W PGK1P00560 416 aaKnown RBP5.52□□□□□ -1.53
VPS29YHR012W TIF1P10081 395 aaKnown RBP5.52□□□□□ -1.53
VPS29YHR012W KIN82P25341 720 aa5.52□□□□□ -1.53
VPS29YHR012W PGM1P33401 570 aaKnown RBP5.52□□□□□ -1.53
VPS29YHR012W DID4P36108 232 aa5.52□□□□□ -1.53
VPS29YHR012W BUD16P39988 312 aa5.52□□□□□ -1.53
VPS29YHR012W MMF1P40185 145 aaKnown RBP5.52□□□□□ -1.53
VPS29YHR012W REF2P42073 533 aaPredicted RBP5.52□□□□□ -1.53
VPS29YHR012W MET13P53128 600 aa5.52□□□□□ -1.53
VPS29YHR012W BNI5P53890 448 aaKnown RBP5.52□□□□□ -1.53
VPS29YHR012W GDE1Q02979 1223 aa5.52□□□□□ -1.53
VPS29YHR012W EMI2Q04409 500 aaKnown RBP5.52□□□□□ -1.53
VPS29YHR012W MAG2Q06436 670 aaKnown RBP5.52□□□□□ -1.53
VPS29YHR012W GPI13Q07830 1017 aa5.52□□□□□ -1.53
VPS29YHR012W CAD1P24813 409 aaKnown RBP5.51□□□□□ -1.53
VPS29YHR012W BMH2P34730 273 aaKnown RBP5.51□□□□□ -1.53
VPS29YHR012W APN2P38207 520 aa5.51□□□□□ -1.53
VPS29YHR012W FMP10P40098 244 aa5.51□□□□□ -1.53
VPS29YHR012W INP51P40559 946 aaKnown RBP5.51□□□□□ -1.53
VPS29YHR012W MVP1P40959 511 aaKnown RBP5.51□□□□□ -1.53
VPS29YHR012W JJJ3P47138 172 aa5.51□□□□□ -1.53
VPS29YHR012W ORC4P54791 529 aa5.51□□□□□ -1.53
VPS29YHR012W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
VPS29YHR012W CRD1Q07560 283 aa5.51□□□□□ -1.53
VPS29YHR012W MET32Q12041 191 aa5.51□□□□□ -1.53
VPS29YHR012W HFI1Q12060 488 aa5.51□□□□□ -1.53
VPS29YHR012W HIF1Q12373 385 aa5.51□□□□□ -1.53
VPS29YHR012W FKS1P38631 1876 aaKnown RBP5.51□□□□□ -1.53
VPS29YHR012W MET6P05694 767 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms