RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A STE11P23561 717 aa5.36□□□□□ -1.55
EFG1YGR271C-A PET112P33893 541 aa5.36□□□□□ -1.55
EFG1YGR271C-A SHM2P37291 469 aaKnown RBP5.36□□□□□ -1.55
EFG1YGR271C-A ROT1Q03691 256 aa5.36□□□□□ -1.55
EFG1YGR271C-A ACK1Q07622 623 aaPredicted RBP5.36□□□□□ -1.55
EFG1YGR271C-A RKM4Q12504 494 aa5.36□□□□□ -1.55
EFG1YGR271C-A THS1P04801 734 aaKnown RBP5.35□□□□□ -1.55
EFG1YGR271C-A MTC3P53077 123 aa5.35□□□□□ -1.55
EFG1YGR271C-A MAP1Q01662 387 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
EFG1YGR271C-A GPB1Q08886 897 aa5.35□□□□□ -1.55
EFG1YGR271C-A APL1P27351 700 aa5.34□□□□□ -1.55
EFG1YGR271C-A SIP5P40210 489 aaKnown RBP5.34□□□□□ -1.55
EFG1YGR271C-A HFM1P51979 1187 aa5.34□□□□□ -1.55
EFG1YGR271C-A TYW3P53177 273 aa5.34□□□□□ -1.55
EFG1YGR271C-A PBP1P53297 722 aaKnown RBP5.34□□□□□ -1.55
EFG1YGR271C-A RXT3Q07458 294 aa5.34□□□□□ -1.55
EFG1YGR271C-A HMI1Q12039 706 aa5.34□□□□□ -1.55
EFG1YGR271C-A MPT5P39016 859 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
EFG1YGR271C-A YGR053CP53234 283 aa5.33□□□□□ -1.56
EFG1YGR271C-A SPP382Q06411 708 aaPredicted RBP5.33□□□□□ -1.56
EFG1YGR271C-A VTS1Q08831 523 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
EFG1YGR271C-A YLL058WQ12198 575 aa5.33□□□□□ -1.56
EFG1YGR271C-A INO1P11986 533 aa5.32□□□□□ -1.56
EFG1YGR271C-A LST4P34239 828 aa5.32□□□□□ -1.56
EFG1YGR271C-A ADY3Q07732 790 aa5.32□□□□□ -1.56
EFG1YGR271C-A NOP12Q08208 459 aaKnown RBP5.31□□□□□ -1.56
EFG1YGR271C-A YKL107WP34251 309 aa5.3□□□□□ -1.56
EFG1YGR271C-A MOT2P34909 587 aaKnown RBP5.3□□□□□ -1.56
EFG1YGR271C-A YKL151CP36059 337 aa5.3□□□□□ -1.56
EFG1YGR271C-A MND2P40577 368 aa5.3□□□□□ -1.56
EFG1YGR271C-A YAP6Q03935 383 aa5.3□□□□□ -1.56
EFG1YGR271C-A YLR224WQ05947 369 aa5.3□□□□□ -1.56
EFG1YGR271C-A XYL2Q07993 356 aa5.3□□□□□ -1.56
EFG1YGR271C-A EMC1P25574 760 aa5.29□□□□□ -1.56
EFG1YGR271C-A MNN10P50108 393 aaKnown RBP5.29□□□□□ -1.56
EFG1YGR271C-A TMA10Q06177 86 aa5.29□□□□□ -1.56
EFG1YGR271C-A YAP1801P38856 637 aa5.28□□□□□ -1.56
EFG1YGR271C-A YGL176CP46945 554 aa5.28□□□□□ -1.56
EFG1YGR271C-A FAA4P47912 694 aaKnown RBP5.28□□□□□ -1.56
EFG1YGR271C-A SPO20Q04359 397 aa5.28□□□□□ -1.56
EFG1YGR271C-A HRQ1Q05549 1077 aa5.28□□□□□ -1.56
EFG1YGR271C-A TUB2P02557 457 aaKnown RBP5.27□□□□□ -1.57
EFG1YGR271C-A TRM2P33753 639 aa5.27□□□□□ -1.57
EFG1YGR271C-A MET12P46151 657 aa5.27□□□□□ -1.57
EFG1YGR271C-A TPO1Q07824 586 aa5.27□□□□□ -1.57
EFG1YGR271C-A PMA1P05030 918 aaKnown RBP5.26□□□□□ -1.57
EFG1YGR271C-A FUN30P31380 1131 aa5.26□□□□□ -1.57
EFG1YGR271C-A DCG1P32460 244 aa5.26□□□□□ -1.57
EFG1YGR271C-A PIN4P34217 668 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
EFG1YGR271C-A SNF7P39929 240 aaKnown RBP5.26□□□□□ -1.57
EFG1YGR271C-A SVF1Q05515 481 aa5.26□□□□□ -1.57
EFG1YGR271C-A YLR225CQ05948 407 aaKnown RBP5.26□□□□□ -1.57
EFG1YGR271C-A ESC2Q06340 456 aa5.26□□□□□ -1.57
EFG1YGR271C-A CDA1Q06702 301 aa5.26□□□□□ -1.57
EFG1YGR271C-A MDM38Q08179 573 aa5.26□□□□□ -1.57
EFG1YGR271C-A PUS9Q12069 462 aa5.26□□□□□ -1.57
EFG1YGR271C-A NTO1Q12311 748 aa5.26□□□□□ -1.57
EFG1YGR271C-A PMI40P29952 429 aaKnown RBP5.25□□□□□ -1.57
EFG1YGR271C-A GIC1P38785 314 aa5.25□□□□□ -1.57
EFG1YGR271C-A CHA4P43634 648 aa5.25□□□□□ -1.57
EFG1YGR271C-A PIN2Q12057 282 aa5.25□□□□□ -1.57
EFG1YGR271C-A HIS5P07172 385 aa5.24□□□□□ -1.57
EFG1YGR271C-A NAP1P25293 417 aaKnown RBP5.24□□□□□ -1.57
EFG1YGR271C-A HCM1P25364 564 aa5.24□□□□□ -1.57
EFG1YGR271C-A AGP1P25376 633 aa5.24□□□□□ -1.57
EFG1YGR271C-A SBA1P28707 216 aaKnown RBP5.24□□□□□ -1.57
EFG1YGR271C-A GCV2P49095 1034 aa5.24□□□□□ -1.57
EFG1YGR271C-A MCM6P53091 1017 aaKnown RBP5.24□□□□□ -1.57
EFG1YGR271C-A GTF1P53260 183 aaPredicted RBP5.24□□□□□ -1.57
EFG1YGR271C-A SRT1Q03175 343 aa5.24□□□□□ -1.57
EFG1YGR271C-A VPS16Q03308 798 aa5.24□□□□□ -1.57
EFG1YGR271C-A RPP2AP05319 106 aaKnown RBP5.23□□□□□ -1.57
EFG1YGR271C-A CLN2P20438 545 aa5.23□□□□□ -1.57
EFG1YGR271C-A CDC12P32468 407 aaKnown RBP5.23□□□□□ -1.57
EFG1YGR271C-A NPP2P39997 493 aa5.23□□□□□ -1.57
EFG1YGR271C-A ZRG8P40021 1076 aa5.23□□□□□ -1.57
EFG1YGR271C-A ECM21P38167 1117 aaKnown RBP5.22□□□□□ -1.57
EFG1YGR271C-A POA1P38218 177 aa5.22□□□□□ -1.57
EFG1YGR271C-A KRI1P42846 591 aaKnown RBP5.22□□□□□ -1.57
EFG1YGR271C-A EXG2P52911 562 aa5.22□□□□□ -1.57
EFG1YGR271C-A GDE1Q02979 1223 aa5.22□□□□□ -1.57
EFG1YGR271C-A OSW2Q12202 724 aa5.22□□□□□ -1.57
EFG1YGR271C-A RPC82P32349 654 aa5.21□□□□□ -1.58
EFG1YGR271C-A ABD1P32783 436 aaPredicted RBP5.21□□□□□ -1.58
EFG1YGR271C-A CHS7P38843 316 aa5.21□□□□□ -1.58
EFG1YGR271C-A URM1P40554 99 aaPredicted RBP5.21□□□□□ -1.58
EFG1YGR271C-A MSE1P48525 536 aa5.21□□□□□ -1.58
EFG1YGR271C-A SLI1P53304 468 aa5.21□□□□□ -1.58
EFG1YGR271C-A URN1Q06525 465 aaKnown RBP5.21□□□□□ -1.58
EFG1YGR271C-A SPE1P08432 466 aa5.2□□□□□ -1.58
EFG1YGR271C-A DEF1P35732 738 aaKnown RBP5.2□□□□□ -1.58
EFG1YGR271C-A YBR238CP38330 731 aaKnown RBP5.2□□□□□ -1.58
EFG1YGR271C-A PLB1P39105 664 aa5.2□□□□□ -1.58
EFG1YGR271C-A GUS1P46655 708 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
EFG1YGR271C-A YGR012WP53206 393 aa5.2□□□□□ -1.58
EFG1YGR271C-A SHE9Q04172 456 aa5.2□□□□□ -1.58
EFG1YGR271C-A PNS1Q12412 539 aa5.2□□□□□ -1.58
EFG1YGR271C-A HSF1P10961 833 aa5.19□□□□□ -1.58
EFG1YGR271C-A PHO23P50947 330 aa5.19□□□□□ -1.58
EFG1YGR271C-A KCS1Q12494 1050 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms