RNA–Protein interactions for RNA: YGR049W

SCM4, Transcript of Mitochondrial outer membrane protein of unknown function, yeast

Gene SCM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCM4	YGR049W	ACM1	Q08981	209 aa		5.21	□□□□□ -1.58
SCM4	YGR049W	PRP6	P19735	899 aa	Predicted RBP	5.2	□□□□□ -1.58
SCM4	YGR049W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
SCM4	YGR049W	SHE9	Q04172	456 aa		5.2	□□□□□ -1.58
SCM4	YGR049W	NBA1	Q08229	501 aa	Known RBP	5.2	□□□□□ -1.58
SCM4	YGR049W	NPP2	P39997	493 aa		5.19	□□□□□ -1.58
SCM4	YGR049W	MTC3	P53077	123 aa		5.19	□□□□□ -1.58
SCM4	YGR049W	XYL2	Q07993	356 aa		5.19	□□□□□ -1.58
SCM4	YGR049W	SVS1	Q12254	260 aa		5.19	□□□□□ -1.58
SCM4	YGR049W	RAD4	P14736	754 aa		5.18	□□□□□ -1.58
SCM4	YGR049W	SRM1	P21827	482 aa		5.18	□□□□□ -1.58
SCM4	YGR049W	GEM1	P39722	662 aa		5.18	□□□□□ -1.58
SCM4	YGR049W	SEC26	P41810	973 aa	Known RBP	5.18	□□□□□ -1.58
SCM4	YGR049W	PFD1	P46988	109 aa		5.18	□□□□□ -1.58
SCM4	YGR049W	HFM1	P51979	1187 aa		5.18	□□□□□ -1.58
SCM4	YGR049W	ACE2	P21192	770 aa		5.17	□□□□□ -1.58
SCM4	YGR049W	FLR1	P38124	548 aa		5.17	□□□□□ -1.58
SCM4	YGR049W	ERT1	P38140	529 aa		5.17	□□□□□ -1.58
SCM4	YGR049W	MRP8	P35719	219 aa		5.16	□□□□□ -1.58
SCM4	YGR049W	AIM3	P38266	947 aa	Known RBP	5.16	□□□□□ -1.58
SCM4	YGR049W	MRPL22	P53881	309 aa		5.16	□□□□□ -1.58
SCM4	YGR049W	DUS3	Q06053	668 aa	Known RBP	5.16	□□□□□ -1.58
SCM4	YGR049W	FMP25	Q08023	583 aa		5.16	□□□□□ -1.58
SCM4	YGR049W	CYC1	P00044	109 aa	Predicted RBP	5.15	□□□□□ -1.59
SCM4	YGR049W	CMP2	P14747	604 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	APL1	P27351	700 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	RFC5	P38251	354 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	SAH1	P39954	449 aa	Known RBP	5.15	□□□□□ -1.59
SCM4	YGR049W	IRR1	P40541	1150 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	IOC3	P43596	787 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	FOL2	P51601	243 aa	Known RBP	5.15	□□□□□ -1.59
SCM4	YGR049W	NAN1	Q02931	896 aa	Known RBP	5.15	□□□□□ -1.59
SCM4	YGR049W	PLB2	Q03674	706 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	YDR306C	Q06640	478 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	UBX5	Q06682	500 aa		5.15	□□□□□ -1.59
SCM4	YGR049W	GAL10	P04397	699 aa		5.14	□□□□□ -1.59
SCM4	YGR049W	RPL8B	P29453	256 aa	Known RBP	5.14	□□□□□ -1.59
SCM4	YGR049W	CDC12	P32468	407 aa	Known RBP	5.14	□□□□□ -1.59
SCM4	YGR049W	HBS1	P32769	611 aa	Known RBP	5.14	□□□□□ -1.59
SCM4	YGR049W	PBY1	P38254	753 aa		5.14	□□□□□ -1.59
SCM4	YGR049W	GIC1	P38785	314 aa		5.14	□□□□□ -1.59
SCM4	YGR049W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SCM4	YGR049W	RIM8	P53179	542 aa		5.14	□□□□□ -1.59
SCM4	YGR049W	ROT1	Q03691	256 aa		5.14	□□□□□ -1.59
SCM4	YGR049W	ATG13	Q06628	738 aa		5.14	□□□□□ -1.59
SCM4	YGR049W	MDM38	Q08179	573 aa		5.14	□□□□□ -1.59
SCM4	YGR049W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SCM4	YGR049W	NPP1	P25353	742 aa		5.13	□□□□□ -1.59
SCM4	YGR049W	AFR1	P33304	620 aa		5.13	□□□□□ -1.59
SCM4	YGR049W	ALR2	P43553	858 aa		5.13	□□□□□ -1.59
SCM4	YGR049W	TIM54	P47045	478 aa		5.13	□□□□□ -1.59
SCM4	YGR049W	HUL5	P53119	910 aa		5.13	□□□□□ -1.59
SCM4	YGR049W	SFB2	P53953	876 aa		5.13	□□□□□ -1.59
SCM4	YGR049W	AIM44	Q99299	758 aa		5.13	□□□□□ -1.59
SCM4	YGR049W	YBR284W	P38150	797 aa		5.12	□□□□□ -1.59
SCM4	YGR049W	YHR020W	P38708	688 aa	Known RBP	5.11	□□□□□ -1.59
SCM4	YGR049W	OCA5	P38738	679 aa		5.11	□□□□□ -1.59
SCM4	YGR049W	KRI1	P42846	591 aa	Known RBP	5.11	□□□□□ -1.59
SCM4	YGR049W	RSM24	Q03976	319 aa		5.11	□□□□□ -1.59
SCM4	YGR049W	BDF2	Q07442	638 aa		5.11	□□□□□ -1.59
SCM4	YGR049W	SOD2	P00447	233 aa		5.1	□□□□□ -1.59
SCM4	YGR049W	TOP3	P13099	656 aa		5.1	□□□□□ -1.59
SCM4	YGR049W	AAR2	P32357	355 aa	Predicted RBP	5.1	□□□□□ -1.59
SCM4	YGR049W	RRT14	P40470	206 aa		5.1	□□□□□ -1.59
SCM4	YGR049W	NNF1	P47149	201 aa		5.1	□□□□□ -1.59
SCM4	YGR049W	GCV2	P49095	1034 aa		5.1	□□□□□ -1.59
SCM4	YGR049W	SRT1	Q03175	343 aa		5.1	□□□□□ -1.59
SCM4	YGR049W	EAF1	Q06337	982 aa		5.1	□□□□□ -1.59
SCM4	YGR049W	PPH3	P32345	308 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	YAP1801	P38856	637 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	SNF7	P39929	240 aa	Known RBP	5.09	□□□□□ -1.59
SCM4	YGR049W	GTF1	P53260	183 aa	Predicted RBP	5.09	□□□□□ -1.59
SCM4	YGR049W	SNO2	P53823	222 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	MSC2	Q03455	724 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	NSE3	Q05541	303 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	SGD1	Q06132	899 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	YPL277C	Q08989	487 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	YOL098C	Q12496	1037 aa		5.09	□□□□□ -1.59
SCM4	YGR049W	THS1	P04801	734 aa	Known RBP	5.08	□□□□□ -1.6
SCM4	YGR049W	KIN2	P13186	1147 aa	Known RBP	5.08	□□□□□ -1.6
SCM4	YGR049W	ARE1	P25628	610 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	TOD6	P34219	525 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	YRO2	P38079	344 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	TSL1	P38427	1098 aa	Known RBP	5.08	□□□□□ -1.6
SCM4	YGR049W	LAM1	P38851	1228 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	CCC2	P38995	1004 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	YGR125W	P53273	1036 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	UTP8	P53276	713 aa	Known RBP	5.08	□□□□□ -1.6
SCM4	YGR049W	YDR132C	Q03900	495 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	SIZ1	Q04195	904 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	FLC1	Q08967	793 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	CDC53	Q12018	815 aa	Known RBP	5.08	□□□□□ -1.6
SCM4	YGR049W	YPR071W	Q12346	211 aa		5.08	□□□□□ -1.6
SCM4	YGR049W	CIT1	P00890	479 aa		5.07	□□□□□ -1.6
SCM4	YGR049W	SRP101	P32916	621 aa		5.07	□□□□□ -1.6
SCM4	YGR049W	MEF2	P39677	819 aa		5.07	□□□□□ -1.6
SCM4	YGR049W	SRP1	Q02821	542 aa	Known RBP	5.07	□□□□□ -1.6
SCM4	YGR049W	BUL2	Q03758	920 aa	Known RBP	5.07	□□□□□ -1.6
SCM4	YGR049W	YLL058W	Q12198	575 aa		5.07	□□□□□ -1.6
SCM4	YGR049W	OSW2	Q12202	724 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms