RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W EUG1P32474 517 aa5.84□□□□□ -1.47
RPN12YFR052W AIM9P40053 627 aaKnown RBP5.84□□□□□ -1.47
RPN12YFR052W VID28P40547 921 aa5.84□□□□□ -1.47
RPN12YFR052W RPT6Q01939 405 aaKnown RBP5.84□□□□□ -1.47
RPN12YFR052W MYO5Q04439 1219 aaKnown RBP5.84□□□□□ -1.47
RPN12YFR052W DUS4Q06063 367 aa5.84□□□□□ -1.47
RPN12YFR052W TDA6Q06466 467 aa5.84□□□□□ -1.47
RPN12YFR052W MCM16Q12262 181 aa5.84□□□□□ -1.47
RPN12YFR052W SRP54P20424 541 aaKnown RBP5.83□□□□□ -1.48
RPN12YFR052W SPT5P27692 1063 aaKnown RBP5.83□□□□□ -1.48
RPN12YFR052W UTR2P32623 467 aa5.83□□□□□ -1.48
RPN12YFR052W UTR4P32626 227 aa5.83□□□□□ -1.48
RPN12YFR052W SHP1P34223 423 aa5.83□□□□□ -1.48
RPN12YFR052W PHO88P38264 188 aaPredicted RBP5.83□□□□□ -1.48
RPN12YFR052W VPS45P38932 577 aa5.83□□□□□ -1.48
RPN12YFR052W SOL4P53315 255 aa5.83□□□□□ -1.48
RPN12YFR052W TMA64Q04600 565 aaKnown RBP5.83□□□□□ -1.48
RPN12YFR052W EST2Q06163 884 aa5.83□□□□□ -1.48
RPN12YFR052W UTP4Q06679 776 aaKnown RBP5.83□□□□□ -1.48
RPN12YFR052W SUP45P12385 437 aaKnown RBP5.82□□□□□ -1.48
RPN12YFR052W ISF1P32488 338 aa5.82□□□□□ -1.48
RPN12YFR052W PSF2P40359 213 aa5.82□□□□□ -1.48
RPN12YFR052W ULP1Q02724 621 aa5.82□□□□□ -1.48
RPN12YFR052W BUL2Q03758 920 aaKnown RBP5.82□□□□□ -1.48
RPN12YFR052W DUS3Q06053 668 aaKnown RBP5.82□□□□□ -1.48
RPN12YFR052W TY3A-GQ12173 290 aa5.82□□□□□ -1.48
RPN12YFR052W RKM4Q12504 494 aa5.82□□□□□ -1.48
RPN12YFR052W YOR111WQ99210 232 aa5.82□□□□□ -1.48
RPN12YFR052W TY3A-IQ99219 290 aa5.82□□□□□ -1.48
RPN12YFR052W TRL1P09880 827 aaKnown RBP5.81□□□□□ -1.48
RPN12YFR052W DAT1P13483 248 aaKnown RBP5.81□□□□□ -1.48
RPN12YFR052W TPM1P17536 199 aaKnown RBP5.81□□□□□ -1.48
RPN12YFR052W RPC31P17890 251 aa5.81□□□□□ -1.48
RPN12YFR052W TGL1P34163 548 aa5.81□□□□□ -1.48
RPN12YFR052W AKR1P39010 764 aa5.81□□□□□ -1.48
RPN12YFR052W EPL1P43572 832 aa5.81□□□□□ -1.48
RPN12YFR052W CTR1P49573 406 aa5.81□□□□□ -1.48
RPN12YFR052W BRE5P53741 515 aaKnown RBP5.81□□□□□ -1.48
RPN12YFR052W ALD6P54115 500 aaKnown RBP5.81□□□□□ -1.48
RPN12YFR052W PHR1P05066 565 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
RPN12YFR052W BIO2P32451 375 aa5.8□□□□□ -1.48
RPN12YFR052W PAH1P32567 862 aa5.8□□□□□ -1.48
RPN12YFR052W SRP40P32583 406 aaPredicted RBP5.8□□□□□ -1.48
RPN12YFR052W AHP1P38013 176 aaKnown RBP5.8□□□□□ -1.48
RPN12YFR052W MCX1P38323 520 aaPredicted RBP5.8□□□□□ -1.48
RPN12YFR052W GPB2P39717 880 aa5.8□□□□□ -1.48
RPN12YFR052W BIM1P40013 344 aa5.8□□□□□ -1.48
RPN12YFR052W SUM1P46676 1062 aa5.8□□□□□ -1.48
RPN12YFR052W YGL039WP53183 348 aaKnown RBP5.8□□□□□ -1.48
RPN12YFR052W MDM1Q01846 1127 aa5.8□□□□□ -1.48
RPN12YFR052W ECM23Q02710 187 aa5.8□□□□□ -1.48
RPN12YFR052W SLD5Q03406 294 aa5.8□□□□□ -1.48
RPN12YFR052W GPM1P00950 247 aaKnown RBP5.79□□□□□ -1.48
RPN12YFR052W HCA4P20448 770 aaKnown RBP5.79□□□□□ -1.48
RPN12YFR052W PRE10P21242 288 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
RPN12YFR052W RNR3P21672 869 aaKnown RBP5.79□□□□□ -1.48
RPN12YFR052W SHM1P37292 490 aaPredicted RBP5.79□□□□□ -1.48
RPN12YFR052W SLX8P40072 274 aa5.79□□□□□ -1.48
RPN12YFR052W ENT3P47160 408 aa5.79□□□□□ -1.48
RPN12YFR052W ASE1P50275 885 aa5.79□□□□□ -1.48
RPN12YFR052W SCS3P53012 380 aa5.79□□□□□ -1.48
RPN12YFR052W VPS62P53285 467 aa5.79□□□□□ -1.48
RPN12YFR052W SPH1Q06160 661 aa5.79□□□□□ -1.48
RPN12YFR052W DSE3Q08729 430 aa5.79□□□□□ -1.48
RPN12YFR052W CIT1P00890 479 aa5.78□□□□□ -1.48
RPN12YFR052W MET6P05694 767 aaKnown RBP5.78□□□□□ -1.48
RPN12YFR052W STI1P15705 589 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
RPN12YFR052W YCK2P23292 546 aaKnown RBP5.78□□□□□ -1.48
RPN12YFR052W BCS1P32839 456 aa5.78□□□□□ -1.48
RPN12YFR052W MCR1P36060 302 aaKnown RBP5.78□□□□□ -1.48
RPN12YFR052W YKR018CP36114 725 aa5.78□□□□□ -1.48
RPN12YFR052W PES4P39684 611 aa5.78□□□□□ -1.48
RPN12YFR052W AFG3P39925 761 aa5.78□□□□□ -1.48
RPN12YFR052W SPO22P40511 975 aa5.78□□□□□ -1.48
RPN12YFR052W ALG2P43636 503 aa5.78□□□□□ -1.48
RPN12YFR052W FMS1P50264 508 aa5.78□□□□□ -1.48
RPN12YFR052W YGR125WP53273 1036 aa5.78□□□□□ -1.48
RPN12YFR052W ARP5P53946 755 aa5.78□□□□□ -1.48
RPN12YFR052W YMR187CQ03236 431 aa5.78□□□□□ -1.48
RPN12YFR052W MET7Q08645 548 aa5.78□□□□□ -1.48
RPN12YFR052W ICL2Q12031 575 aa5.78□□□□□ -1.48
RPN12YFR052W ERP3Q12403 225 aa5.78□□□□□ -1.48
RPN12YFR052W YOR131CQ12486 218 aa5.78□□□□□ -1.48
RPN12YFR052W YUR1P26725 428 aa5.77□□□□□ -1.49
RPN12YFR052W RGT1P32862 1170 aa5.77□□□□□ -1.49
RPN12YFR052W TBS1P38114 1094 aa5.77□□□□□ -1.49
RPN12YFR052W MAL31P38156 614 aa5.77□□□□□ -1.49
RPN12YFR052W REG2P38232 338 aa5.77□□□□□ -1.49
RPN12YFR052W ATG32P40458 529 aa5.77□□□□□ -1.49
RPN12YFR052W LSB1P53281 241 aa5.77□□□□□ -1.49
RPN12YFR052W GIS4Q04233 774 aa5.77□□□□□ -1.49
RPN12YFR052W UTP13Q05946 817 aaKnown RBP5.77□□□□□ -1.49
RPN12YFR052W VIP1Q06685 1146 aaKnown RBP5.77□□□□□ -1.49
RPN12YFR052W MSC6Q08818 692 aaKnown RBP5.77□□□□□ -1.49
RPN12YFR052W OXR1Q08952 273 aa5.77□□□□□ -1.49
RPN12YFR052W SUT2Q12286 268 aa5.77□□□□□ -1.49
RPN12YFR052W CLF1Q12309 687 aaPredicted RBP5.77□□□□□ -1.49
RPN12YFR052W SWI4P25302 1093 aaKnown RBP5.76□□□□□ -1.49
RPN12YFR052W IRE1P32361 1115 aa5.76□□□□□ -1.49
RPN12YFR052W MAC1P35192 417 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms