RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	TSR2	Q06672	205 aa	Known RBP	4.71	□□□□□ -1.66
UBP6	YFR010W	FLP1	P03870	423 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	ERR1	P0CX10	437 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	ERR2	P0CX11	437 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	SST2	P11972	698 aa	Known RBP	4.7	□□□□□ -1.66
UBP6	YFR010W	NPR1	P22211	790 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	COQ2	P32378	372 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	VPH1	P32563	840 aa	Known RBP	4.7	□□□□□ -1.66
UBP6	YFR010W	STO1	P34160	861 aa	Known RBP	4.7	□□□□□ -1.66
UBP6	YFR010W	TRZ1	P36159	838 aa	Predicted RBP	4.7	□□□□□ -1.66
UBP6	YFR010W	EXO84	P38261	753 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	AKR1	P39010	764 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	CAJ1	P39101	391 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	PEA2	P40091	420 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	IRC24	P40580	263 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	YGR237C	P50089	785 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	CDC45	Q08032	650 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	NTG2	Q08214	380 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	YOL087C	Q99247	1116 aa		4.7	□□□□□ -1.66
UBP6	YFR010W	ECM32	P32644	1121 aa	Known RBP	4.69	□□□□□ -1.66
UBP6	YFR010W	PEX5	P35056	612 aa		4.69	□□□□□ -1.66
UBP6	YFR010W	ENV11	P53246	860 aa		4.69	□□□□□ -1.66
UBP6	YFR010W	NCE103	P53615	221 aa		4.69	□□□□□ -1.66
UBP6	YFR010W	TIM11	P81449	96 aa	Predicted RBP	4.69	□□□□□ -1.66
UBP6	YFR010W	TDA5	Q06417	326 aa	Known RBP	4.69	□□□□□ -1.66
UBP6	YFR010W	SGT2	Q12118	346 aa	Known RBP	4.69	□□□□□ -1.66
UBP6	YFR010W	YLR122C	Q12312	125 aa		4.69	□□□□□ -1.66
UBP6	YFR010W	TOM70	P07213	617 aa	Known RBP	4.68	□□□□□ -1.66
UBP6	YFR010W	CYC8	P14922	966 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	MEF1	P25039	761 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	AAD3	P25612	363 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	NAM7	P30771	971 aa	Known RBP	4.68	□□□□□ -1.66
UBP6	YFR010W	SFP1	P32432	683 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	SAF1	P38352	637 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	RSP5	P39940	809 aa	Known RBP	4.68	□□□□□ -1.66
UBP6	YFR010W	SPF1	P39986	1215 aa	Known RBP	4.68	□□□□□ -1.66
UBP6	YFR010W	ESL1	P40456	1118 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	SAP185	P40856	1058 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	VTC2	P43585	828 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	BNA1	P47096	177 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	PIP2	P52960	996 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	TYW3	P53177	273 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	COG6	P53959	839 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	ATG13	Q06628	738 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	INP54	Q08227	384 aa	Known RBP	4.68	□□□□□ -1.66
UBP6	YFR010W	FLC1	Q08967	793 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	DBP10	Q12389	995 aa	Known RBP	4.68	□□□□□ -1.66
UBP6	YFR010W	MPD2	Q99316	277 aa		4.68	□□□□□ -1.66
UBP6	YFR010W	SPT7	P35177	1332 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	PRP5	P21372	849 aa	Predicted RBP	4.67	□□□□□ -1.66
UBP6	YFR010W	RAD51	P25454	400 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	PTH2	P34222	208 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	YKL050C	P35736	922 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	RRP8	P38961	392 aa	Known RBP	4.67	□□□□□ -1.66
UBP6	YFR010W	SAP155	P43612	1002 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	UBA2	P52488	636 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	YNL034W	P53963	612 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	YNL018C	P53976	612 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	ERO1	Q03103	563 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	REH1	Q06709	432 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
UBP6	YFR010W	NOC3	Q07896	663 aa	Predicted RBP	4.67	□□□□□ -1.66
UBP6	YFR010W	YIG1	Q08956	461 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	HTS1	P07263	546 aa	Known RBP	4.67	□□□□□ -1.66
UBP6	YFR010W	SMY2	P32909	740 aa	Known RBP	4.67	□□□□□ -1.66
UBP6	YFR010W	KAE1	P36132	386 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	MNT3	P40549	630 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	MRPS18	P42847	217 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	FAA4	P47912	694 aa	Known RBP	4.67	□□□□□ -1.66
UBP6	YFR010W	NUT1	P53114	1132 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	BTN2	P53286	410 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	YML131W	Q03102	365 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	BUL2	Q03758	920 aa	Known RBP	4.67	□□□□□ -1.66
UBP6	YFR010W	PSR2	Q07949	397 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	YPL191C	Q08930	360 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	MED1	Q12321	566 aa		4.67	□□□□□ -1.66
UBP6	YFR010W	NAT1	P12945	854 aa	Known RBP	4.66	□□□□□ -1.66
UBP6	YFR010W	PRI2	P20457	528 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	ACE2	P21192	770 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	NUP120	P35729	1037 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	NOP4	P37838	685 aa	Known RBP	4.66	□□□□□ -1.66
UBP6	YFR010W	MXR1	P40029	184 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	PMT3	P47190	753 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	HLJ1	P48353	224 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	INP52	P50942	1183 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	BNI5	P53890	448 aa	Known RBP	4.66	□□□□□ -1.66
UBP6	YFR010W	YMR074C	Q04773	145 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	YSH1	Q06224	779 aa	Predicted RBP	4.66	□□□□□ -1.66
UBP6	YFR010W	OPI10	Q08202	246 aa		4.66	□□□□□ -1.66
UBP6	YFR010W	CHD1	P32657	1468 aa		4.65	□□□□□ -1.66
UBP6	YFR010W	CHS2	P14180	963 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	IMP2'	P32351	346 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	YKL100C	P34248	587 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	YKR073C	P36153	106 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	YBR071W	P38243	211 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	MAM1	P40065	302 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	SEC9	P40357	651 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	GCV1	P48015	400 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	ATP22	P50273	684 aa	Predicted RBP	4.65	□□□□□ -1.67
UBP6	YFR010W	PEX14	P53112	341 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 77.9 ms