RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W GIS4Q04233 774 aa6.05□□□□□ -1.44
DEG1YFL001W DUS3Q06053 668 aaKnown RBP6.05□□□□□ -1.44
DEG1YFL001W THI73Q07904 523 aa6.05□□□□□ -1.44
DEG1YFL001W AVO1Q08236 1176 aa6.05□□□□□ -1.44
DEG1YFL001W ELG1Q12050 791 aa6.05□□□□□ -1.44
DEG1YFL001W TMA17Q12513 150 aa6.05□□□□□ -1.44
DEG1YFL001W YER152CP10356 443 aa6.04□□□□□ -1.44
DEG1YFL001W RAD53P22216 821 aa6.04□□□□□ -1.44
DEG1YFL001W GSY1P23337 708 aa6.04□□□□□ -1.44
DEG1YFL001W QNS1P38795 714 aaKnown RBP6.04□□□□□ -1.44
DEG1YFL001W DSS1P39112 969 aa6.04□□□□□ -1.44
DEG1YFL001W TED1P40533 473 aa6.04□□□□□ -1.44
DEG1YFL001W UME1Q03010 460 aa6.04□□□□□ -1.44
DEG1YFL001W ALG6Q12001 544 aaKnown RBP6.04□□□□□ -1.44
DEG1YFL001W YPR071WQ12346 211 aa6.04□□□□□ -1.44
DEG1YFL001W NUP145P49687 1317 aa6.04□□□□□ -1.44
DEG1YFL001W RPL11AP0C0W9 174 aaKnown RBP6.03□□□□□ -1.44
DEG1YFL001W SAC7P17121 654 aa6.03□□□□□ -1.44
DEG1YFL001W NAR1P23503 491 aaKnown RBP6.03□□□□□ -1.44
DEG1YFL001W PPH3P32345 308 aa6.03□□□□□ -1.44
DEG1YFL001W SWE1P32944 819 aa6.03□□□□□ -1.44
DEG1YFL001W IRC24P40580 263 aa6.03□□□□□ -1.44
DEG1YFL001W SEC26P41810 973 aaKnown RBP6.03□□□□□ -1.44
DEG1YFL001W ALG2P43636 503 aa6.03□□□□□ -1.44
DEG1YFL001W SUB1P54000 292 aaKnown RBP6.03□□□□□ -1.44
DEG1YFL001W YPL034WQ03083 165 aa6.03□□□□□ -1.44
DEG1YFL001W BUL2Q03758 920 aaKnown RBP6.03□□□□□ -1.44
DEG1YFL001W YMR074CQ04773 145 aa6.03□□□□□ -1.44
DEG1YFL001W RSA3Q05942 220 aaKnown RBP6.03□□□□□ -1.44
DEG1YFL001W RPL11BQ3E757 174 aaPredicted RBP6.03□□□□□ -1.44
DEG1YFL001W ERS1P17261 260 aa6.02□□□□□ -1.45
DEG1YFL001W DBP2P24783 546 aaKnown RBP6.02□□□□□ -1.45
DEG1YFL001W NFS1P25374 497 aa6.02□□□□□ -1.45
DEG1YFL001W VBA3P25594 458 aa6.02□□□□□ -1.45
DEG1YFL001W KIP1P28742 1111 aa6.02□□□□□ -1.45
DEG1YFL001W PRY1P47032 299 aa6.02□□□□□ -1.45
DEG1YFL001W GPG1P53130 126 aa6.02□□□□□ -1.45
DEG1YFL001W PEX8P53248 589 aa6.02□□□□□ -1.45
DEG1YFL001W LCD1Q04377 747 aa6.02□□□□□ -1.45
DEG1YFL001W SPO21Q12411 609 aa6.02□□□□□ -1.45
DEG1YFL001W TY4B-PA0A0B7P3V8 1104 aa6.01□□□□□ -1.45
DEG1YFL001W ADE8P04161 214 aa6.01□□□□□ -1.45
DEG1YFL001W CDC12P32468 407 aaKnown RBP6.01□□□□□ -1.45
DEG1YFL001W MGS1P40151 587 aa6.01□□□□□ -1.45
DEG1YFL001W SDA1P53313 767 aaKnown RBP6.01□□□□□ -1.45
DEG1YFL001W ALO1P54783 526 aaKnown RBP6.01□□□□□ -1.45
DEG1YFL001W SRP1Q02821 542 aaKnown RBP6.01□□□□□ -1.45
DEG1YFL001W TY4A-HQ6Q5P6 413 aa6.01□□□□□ -1.45
DEG1YFL001W PHR1P05066 565 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
DEG1YFL001W RET1P22276 1149 aaKnown RBP6□□□□□ -1.45
DEG1YFL001W SEC6P32844 805 aa6□□□□□ -1.45
DEG1YFL001W AFR1P33304 620 aa6□□□□□ -1.45
DEG1YFL001W MAE1P36013 669 aaKnown RBP6□□□□□ -1.45
DEG1YFL001W YRO2P38079 344 aa6□□□□□ -1.45
DEG1YFL001W PMC1P38929 1173 aaPredicted RBP6□□□□□ -1.45
DEG1YFL001W ELA1P53861 379 aaPredicted RBP6□□□□□ -1.45
DEG1YFL001W CDC9P04819 755 aa5.99□□□□□ -1.45
DEG1YFL001W SPC29P33419 253 aa5.99□□□□□ -1.45
DEG1YFL001W YEL1P34225 687 aa5.99□□□□□ -1.45
DEG1YFL001W RPN3P40016 523 aaKnown RBP5.99□□□□□ -1.45
DEG1YFL001W MXR1P40029 184 aa5.99□□□□□ -1.45
DEG1YFL001W YJR120WP47157 116 aa5.99□□□□□ -1.45
DEG1YFL001W YOR223WQ12015 292 aa5.99□□□□□ -1.45
DEG1YFL001W FAP7Q12055 197 aaPredicted RBP5.99□□□□□ -1.45
DEG1YFL001W SRD1P09007 221 aa5.99□□□□□ -1.45
DEG1YFL001W PGM2P37012 569 aaKnown RBP5.99□□□□□ -1.45
DEG1YFL001W ALG14P38242 237 aa5.99□□□□□ -1.45
DEG1YFL001W SAH1P39954 449 aaKnown RBP5.99□□□□□ -1.45
DEG1YFL001W TOK1P40310 691 aa5.99□□□□□ -1.45
DEG1YFL001W DOT1Q04089 582 aaKnown RBP5.99□□□□□ -1.45
DEG1YFL001W YLR257WQ06146 321 aaKnown RBP5.99□□□□□ -1.45
DEG1YFL001W ACM1Q08981 209 aa5.99□□□□□ -1.45
DEG1YFL001W SLA2P33338 968 aa5.98□□□□□ -1.45
DEG1YFL001W NNK1P36003 928 aa5.98□□□□□ -1.45
DEG1YFL001W TYS1P36421 394 aaKnown RBP5.98□□□□□ -1.45
DEG1YFL001W BAP2P38084 609 aa5.98□□□□□ -1.45
DEG1YFL001W GPB2P39717 880 aa5.98□□□□□ -1.45
DEG1YFL001W KIP3P53086 805 aaKnown RBP5.98□□□□□ -1.45
DEG1YFL001W YGR283CP53336 341 aaPredicted RBP5.98□□□□□ -1.45
DEG1YFL001W DSE4P53753 1117 aa5.98□□□□□ -1.45
DEG1YFL001W NPP1P25353 742 aa5.97□□□□□ -1.45
DEG1YFL001W PCL2P25693 308 aa5.97□□□□□ -1.45
DEG1YFL001W PRO1P32264 428 aa5.97□□□□□ -1.45
DEG1YFL001W REC104P33323 182 aa5.97□□□□□ -1.45
DEG1YFL001W MTC2P34246 357 aa5.97□□□□□ -1.45
DEG1YFL001W YKL151CP36059 337 aa5.97□□□□□ -1.45
DEG1YFL001W OMA1P36163 345 aa5.97□□□□□ -1.45
DEG1YFL001W ERT1P38140 529 aa5.97□□□□□ -1.45
DEG1YFL001W YBR071WP38243 211 aa5.97□□□□□ -1.45
DEG1YFL001W NIT1P40447 199 aa5.97□□□□□ -1.45
DEG1YFL001W GPP1P41277 250 aaKnown RBP5.97□□□□□ -1.45
DEG1YFL001W CCM1P48237 864 aaPredicted RBP5.97□□□□□ -1.45
DEG1YFL001W INP52P50942 1183 aa5.97□□□□□ -1.45
DEG1YFL001W MET13P53128 600 aa5.97□□□□□ -1.45
DEG1YFL001W HFD1Q04458 532 aa5.97□□□□□ -1.45
DEG1YFL001W HRQ1Q05549 1077 aa5.97□□□□□ -1.45
DEG1YFL001W HRK1Q08732 759 aaKnown RBP5.97□□□□□ -1.45
DEG1YFL001W TMA7Q3E764 64 aaKnown RBP5.97□□□□□ -1.45
DEG1YFL001W EUG1P32474 517 aa5.96□□□□□ -1.46
DEG1YFL001W SMY2P32909 740 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms