RNA–Protein interactions for RNA: YDR473C

PRP3, Transcript of Splicing factor, yeast

Gene PRP3, Length 1,410 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP3	YDR473C	MSH3	P25336	1018 aa		4.6	□□□□□ -1.67
PRP3	YDR473C	PLC1	P32383	869 aa		4.6	□□□□□ -1.67
PRP3	YDR473C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PRP3	YDR473C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PRP3	YDR473C	SPC105	P53148	917 aa		4.6	□□□□□ -1.67
PRP3	YDR473C	ROD1	Q02805	837 aa		4.6	□□□□□ -1.67
PRP3	YDR473C	YLR122C	Q12312	125 aa		4.6	□□□□□ -1.67
PRP3	YDR473C	MDM12	Q92328	271 aa		4.6	□□□□□ -1.67
PRP3	YDR473C	HBN1	Q96VH4	193 aa		4.6	□□□□□ -1.67
PRP3	YDR473C	TOP3	P13099	656 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	RPC31	P17890	251 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	PRP5	P21372	849 aa	Predicted RBP	4.59	□□□□□ -1.67
PRP3	YDR473C	VBA3	P25594	458 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	MKK2	P32491	506 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	YKL107W	P34251	309 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	TRZ1	P36159	838 aa	Predicted RBP	4.59	□□□□□ -1.67
PRP3	YDR473C	TOS1	P38288	455 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	SEC26	P41810	973 aa	Known RBP	4.59	□□□□□ -1.67
PRP3	YDR473C	SAP155	P43612	1002 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	CTH1	P47976	325 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	PIP2	P52960	996 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	MET14	Q02196	202 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	YLR001C	Q07895	862 aa		4.59	□□□□□ -1.67
PRP3	YDR473C	CMR1	Q12510	522 aa	Known RBP	4.59	□□□□□ -1.67
PRP3	YDR473C	HEM13	P11353	328 aa	Known RBP	4.58	□□□□□ -1.68
PRP3	YDR473C	YBR284W	P38150	797 aa		4.58	□□□□□ -1.68
PRP3	YDR473C	APM2	P38700	605 aa		4.58	□□□□□ -1.68
PRP3	YDR473C	SHU2	P38957	223 aa		4.58	□□□□□ -1.68
PRP3	YDR473C	YGL176C	P46945	554 aa		4.58	□□□□□ -1.68
PRP3	YDR473C	ENT3	P47160	408 aa		4.58	□□□□□ -1.68
PRP3	YDR473C	NOG1	Q02892	647 aa	Known RBP	4.58	□□□□□ -1.68
PRP3	YDR473C	ERP4	Q12450	207 aa		4.58	□□□□□ -1.68
PRP3	YDR473C	RKM4	Q12504	494 aa		4.58	□□□□□ -1.68
PRP3	YDR473C	SSH4	P32343	579 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	PTH2	P34222	208 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	NCL1	P38205	684 aa	Known RBP	4.57	□□□□□ -1.68
PRP3	YDR473C	PAN5	P38787	379 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	YAP1801	P38856	637 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	SAH1	P39954	449 aa	Known RBP	4.57	□□□□□ -1.68
PRP3	YDR473C	MGS1	P40151	587 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	YIL165C	P40446	119 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	SKP1	P52286	194 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	MDM1	Q01846	1127 aa		4.57	□□□□□ -1.68
PRP3	YDR473C	MTQ2	Q03920	221 aa	Predicted RBP	4.57	□□□□□ -1.68
PRP3	YDR473C	TIF35	Q04067	274 aa	Known RBP	4.57	□□□□□ -1.68
PRP3	YDR473C	GAL1	P04385	528 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	MPH2	P0CD99	609 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	RAD53	P22216	821 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	HBS1	P32769	611 aa	Known RBP	4.56	□□□□□ -1.68
PRP3	YDR473C	DOM34	P33309	386 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	MCM7	P38132	845 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	RIM11	P38615	370 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	RIM4	P38741	713 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	CUS1	Q02554	436 aa	Predicted RBP	4.56	□□□□□ -1.68
PRP3	YDR473C	BRE4	Q07660	1125 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	YPL066W	Q12194	479 aa		4.56	□□□□□ -1.68
PRP3	YDR473C	INH1	P01097	85 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	RAD18	P10862	487 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	SYP1	P25623	870 aa	Known RBP	4.55	□□□□□ -1.68
PRP3	YDR473C	PTP2	P29461	750 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	NIC96	P34077	839 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	EXO84	P38261	753 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	UBP6	P43593	499 aa	Known RBP	4.55	□□□□□ -1.68
PRP3	YDR473C	YDR306C	Q06640	478 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PRP3	YDR473C	HVG1	P0CE11	249 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	GFD2	P25370	566 aa	Known RBP	4.55	□□□□□ -1.68
PRP3	YDR473C	PRP19	P32523	503 aa	Known RBP	4.55	□□□□□ -1.68
PRP3	YDR473C	HSP78	P33416	811 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	RDH54	P38086	958 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	SAF1	P38352	637 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	UBP5	P39944	805 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	TAN1	P53072	289 aa	Predicted RBP	4.55	□□□□□ -1.68
PRP3	YDR473C	EST2	Q06163	884 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	YPR071W	Q12346	211 aa		4.55	□□□□□ -1.68
PRP3	YDR473C	CDC9	P04819	755 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	SRD1	P09007	221 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	MSD1	P15179	658 aa	Known RBP	4.54	□□□□□ -1.68
PRP3	YDR473C	AEP2	P22136	580 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	RSC6	P25632	483 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	AAR2	P32357	355 aa	Predicted RBP	4.54	□□□□□ -1.68
PRP3	YDR473C	TOA1	P32773	286 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	SCT1	P32784	759 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	YKL133C	P36066	463 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	YKL077W	P36081	392 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	JNM1	P36224	373 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	CNN1	P43618	361 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	ALG2	P43636	503 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	TAF1	P46677	1066 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	MET13	P53128	600 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	RAT1	Q02792	1006 aa	Known RBP	4.54	□□□□□ -1.68
PRP3	YDR473C	RRP6	Q12149	733 aa	Known RBP	4.54	□□□□□ -1.68
PRP3	YDR473C	RRI2	Q12348	645 aa		4.54	□□□□□ -1.68
PRP3	YDR473C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PRP3	YDR473C	DBP5	P20449	482 aa	Known RBP	4.53	□□□□□ -1.68
PRP3	YDR473C	NFU1	P32860	256 aa		4.53	□□□□□ -1.68
PRP3	YDR473C	BLI1	P35727	113 aa		4.53	□□□□□ -1.68
PRP3	YDR473C	YJR096W	P47137	282 aa		4.53	□□□□□ -1.68
PRP3	YDR473C	MLC2	Q06580	163 aa		4.53	□□□□□ -1.68
PRP3	YDR473C	PSR2	Q07949	397 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms