RNA–Protein interactions for RNA: YDR025W

RPS11A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11A, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11A	YDR025W	VPS72	Q03388	795 aa		4.96	□□□□□ -1.62
RPS11A	YDR025W	YMR265C	Q03508	461 aa	Known RBP	4.96	□□□□□ -1.62
RPS11A	YDR025W	YLR346C	Q06139	101 aa		4.96	□□□□□ -1.62
RPS11A	YDR025W	PTC5	Q12511	572 aa		4.96	□□□□□ -1.62
RPS11A	YDR025W	RAD53	P22216	821 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	FPS1	P23900	669 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	VBA3	P25594	458 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	REI1	P38344	393 aa	Predicted RBP	4.95	□□□□□ -1.62
RPS11A	YDR025W	SIC1	P38634	284 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	SIT1	P39980	628 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	MGS1	P40151	587 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	SMC3	P47037	1230 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	PIL1	P53252	339 aa	Known RBP	4.95	□□□□□ -1.62
RPS11A	YDR025W	TPO2	P53283	614 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	SPO71	Q03868	1245 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	YOR378W	Q08902	515 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	TY1A-BL	Q12266	440 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	STU1	P38198	1513 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	NUP145	P49687	1317 aa		4.95	□□□□□ -1.62
RPS11A	YDR025W	DBP2	P24783	546 aa	Known RBP	4.94	□□□□□ -1.62
RPS11A	YDR025W	ATG14	P38270	344 aa		4.94	□□□□□ -1.62
RPS11A	YDR025W	SDA1	P53313	767 aa	Known RBP	4.94	□□□□□ -1.62
RPS11A	YDR025W	CUZ1	P53899	274 aa		4.94	□□□□□ -1.62
RPS11A	YDR025W	DUS3	Q06053	668 aa	Known RBP	4.94	□□□□□ -1.62
RPS11A	YDR025W	SPP382	Q06411	708 aa	Predicted RBP	4.94	□□□□□ -1.62
RPS11A	YDR025W	SLX4	Q12098	748 aa		4.94	□□□□□ -1.62
RPS11A	YDR025W	EDE1	P34216	1381 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	YER152C	P10356	443 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	GSY1	P23337	708 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	YAR028W	P39548	234 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	GIP2	P40036	548 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	NIT1	P40447	199 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	GPP1	P41277	250 aa	Known RBP	4.93	□□□□□ -1.62
RPS11A	YDR025W	YGR045C	P53229	120 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	COG6	P53959	839 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	ADE12	P80210	433 aa	Known RBP	4.93	□□□□□ -1.62
RPS11A	YDR025W	ETT1	Q08421	412 aa	Known RBP	4.93	□□□□□ -1.62
RPS11A	YDR025W	FAP7	Q12055	197 aa	Predicted RBP	4.93	□□□□□ -1.62
RPS11A	YDR025W	YDR461C-A	Q2V2P7	80 aa		4.93	□□□□□ -1.62
RPS11A	YDR025W	TMA7	Q3E764	64 aa	Known RBP	4.93	□□□□□ -1.62
RPS11A	YDR025W	CDC9	P04819	755 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RPS11A	YDR025W	NOT3	P06102	836 aa	Known RBP	4.92	□□□□□ -1.62
RPS11A	YDR025W	EUG1	P32474	517 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	SCT1	P32784	759 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	TYS1	P36421	394 aa	Known RBP	4.92	□□□□□ -1.62
RPS11A	YDR025W	BAP2	P38084	609 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	YBR071W	P38243	211 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	DJP1	P40564	432 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	ALG2	P43636	503 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	VPS53	P47061	822 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	MET13	P53128	600 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	SCW11	P53189	542 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	TGL2	P54857	326 aa		4.92	□□□□□ -1.62
RPS11A	YDR025W	BUL2	Q03758	920 aa	Known RBP	4.92	□□□□□ -1.62
RPS11A	YDR025W	ALG6	Q12001	544 aa	Known RBP	4.92	□□□□□ -1.62
RPS11A	YDR025W	TAF2	P23255	1407 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	ADE8	P04161	214 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	RPL11A	P0C0W9	174 aa	Known RBP	4.91	□□□□□ -1.62
RPS11A	YDR025W	PWP2	P25635	923 aa	Known RBP	4.91	□□□□□ -1.62
RPS11A	YDR025W	AFR1	P33304	620 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	VPS24	P36095	224 aa	Known RBP	4.91	□□□□□ -1.62
RPS11A	YDR025W	BYE1	P36106	594 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	YRO2	P38079	344 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	ERT1	P38140	529 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	QNS1	P38795	714 aa	Known RBP	4.91	□□□□□ -1.62
RPS11A	YDR025W	SAH1	P39954	449 aa	Known RBP	4.91	□□□□□ -1.62
RPS11A	YDR025W	MXR1	P40029	184 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	ROG3	P43602	733 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	TY4A-J	P47023	414 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	GRX3	Q03835	250 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	SND1	Q04007	877 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	TY1A-MR1	Q04215	440 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	AVO1	Q08236	1176 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	YPL260W	Q08977	551 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	LAP2	Q10740	671 aa		4.91	□□□□□ -1.62
RPS11A	YDR025W	RPL11B	Q3E757	174 aa	Predicted RBP	4.91	□□□□□ -1.62
RPS11A	YDR025W	SMC4	Q12267	1418 aa		4.9	□□□□□ -1.62
RPS11A	YDR025W	SCC2	Q04002	1493 aa		4.9	□□□□□ -1.62
RPS11A	YDR025W	SRD1	P09007	221 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	KAR1	P11927	433 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	RET1	P22276	1149 aa	Known RBP	4.9	□□□□□ -1.63
RPS11A	YDR025W	NFS1	P25374	497 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	PCL2	P25693	308 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	KIP1	P28742	1111 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	PPH3	P32345	308 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	SPC29	P33419	253 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	YKL151C	P36059	337 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RPS11A	YDR025W	TOK1	P40310	691 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	DAS1	P47005	663 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	LYS5	P50113	272 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	MTQ2	Q03920	221 aa	Predicted RBP	4.9	□□□□□ -1.63
RPS11A	YDR025W	LCD1	Q04377	747 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	HFD1	Q04458	532 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	SYT1	Q06836	1226 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	RLP24	Q07915	199 aa	Known RBP	4.9	□□□□□ -1.63
RPS11A	YDR025W	BMS1	Q08965	1183 aa	Known RBP	4.9	□□□□□ -1.63
RPS11A	YDR025W	DNA2	P38859	1522 aa		4.9	□□□□□ -1.63
RPS11A	YDR025W	REV3	P14284	1504 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms