RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHS1	YDL225W	SLA2	P33338	968 aa		4.19	□□□□□ -1.74
SHS1	YDL225W	UGA2	P38067	497 aa		4.19	□□□□□ -1.74
SHS1	YDL225W	PTC7	P38797	343 aa		4.19	□□□□□ -1.74
SHS1	YDL225W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
SHS1	YDL225W	SSY1	Q03770	852 aa		4.19	□□□□□ -1.74
SHS1	YDL225W	YDR306C	Q06640	478 aa		4.19	□□□□□ -1.74
SHS1	YDL225W	UBX5	Q06682	500 aa		4.19	□□□□□ -1.74
SHS1	YDL225W	RSC58	Q07979	502 aa		4.19	□□□□□ -1.74
SHS1	YDL225W	CIT1	P00890	479 aa		4.18	□□□□□ -1.74
SHS1	YDL225W	ADP1	P25371	1049 aa		4.18	□□□□□ -1.74
SHS1	YDL225W	YKR073C	P36153	106 aa		4.18	□□□□□ -1.74
SHS1	YDL225W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SHS1	YDL225W	GTS1	P40956	396 aa		4.18	□□□□□ -1.74
SHS1	YDL225W	NBA1	Q08229	501 aa	Known RBP	4.18	□□□□□ -1.74
SHS1	YDL225W	RSB1	Q08417	382 aa		4.18	□□□□□ -1.74
SHS1	YDL225W	AIM44	Q99299	758 aa		4.18	□□□□□ -1.74
SHS1	YDL225W	BI4	P03879	638 aa		4.17	□□□□□ -1.74
SHS1	YDL225W	CIT2	P08679	460 aa		4.17	□□□□□ -1.74
SHS1	YDL225W	AAR2	P32357	355 aa	Predicted RBP	4.17	□□□□□ -1.74
SHS1	YDL225W	AIM26	P32858	118 aa		4.17	□□□□□ -1.74
SHS1	YDL225W	CHZ1	P40019	153 aa	Predicted RBP	4.17	□□□□□ -1.74
SHS1	YDL225W	HUL4	P40985	892 aa		4.17	□□□□□ -1.74
SHS1	YDL225W	OSW7	P43611	510 aa		4.17	□□□□□ -1.74
SHS1	YDL225W	DUS3	Q06053	668 aa	Known RBP	4.17	□□□□□ -1.74
SHS1	YDL225W	CAN1	P04817	590 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	HBS1	P32769	611 aa	Known RBP	4.16	□□□□□ -1.74
SHS1	YDL225W	YKL151C	P36059	337 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	GGA2	P38817	585 aa	Known RBP	4.16	□□□□□ -1.74
SHS1	YDL225W	SAH1	P39954	449 aa	Known RBP	4.16	□□□□□ -1.74
SHS1	YDL225W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SHS1	YDL225W	FOL2	P51601	243 aa	Known RBP	4.16	□□□□□ -1.74
SHS1	YDL225W	SDH1	Q00711	640 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	SRP1	Q02821	542 aa	Known RBP	4.16	□□□□□ -1.74
SHS1	YDL225W	PPM2	Q08282	695 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	THS1	P04801	734 aa	Known RBP	4.16	□□□□□ -1.74
SHS1	YDL225W	PPH3	P32345	308 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	CDC11	P32458	415 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	RNH70	P53331	553 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	TAF8	Q03750	510 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	HRQ1	Q05549	1077 aa		4.16	□□□□□ -1.74
SHS1	YDL225W	ADE8	P04161	214 aa		4.15	□□□□□ -1.75
SHS1	YDL225W	YBR284W	P38150	797 aa		4.15	□□□□□ -1.75
SHS1	YDL225W	CCC2	P38995	1004 aa		4.15	□□□□□ -1.75
SHS1	YDL225W	MTC3	P53077	123 aa		4.15	□□□□□ -1.75
SHS1	YDL225W	TPO2	P53283	614 aa		4.15	□□□□□ -1.75
SHS1	YDL225W	SVS1	Q12254	260 aa		4.15	□□□□□ -1.75
SHS1	YDL225W	HBN1	Q96VH4	193 aa		4.15	□□□□□ -1.75
SHS1	YDL225W	PPG1	P32838	368 aa		4.14	□□□□□ -1.75
SHS1	YDL225W	SIT1	P39980	628 aa		4.14	□□□□□ -1.75
SHS1	YDL225W	NUP82	P40368	713 aa		4.14	□□□□□ -1.75
SHS1	YDL225W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SHS1	YDL225W	YDL124W	Q07551	312 aa	Known RBP	4.14	□□□□□ -1.75
SHS1	YDL225W	SPS1	P08458	490 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	GAL11	P19659	1081 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	ACE2	P21192	770 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	CDC12	P32468	407 aa	Known RBP	4.13	□□□□□ -1.75
SHS1	YDL225W	TIM23	P32897	222 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	YRO2	P38079	344 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	RFC5	P38251	354 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	SEC26	P41810	973 aa	Known RBP	4.13	□□□□□ -1.75
SHS1	YDL225W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SHS1	YDL225W	ATG13	Q06628	738 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	MDM38	Q08179	573 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	YPR071W	Q12346	211 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	LPX1	Q12405	387 aa	Known RBP	4.13	□□□□□ -1.75
SHS1	YDL225W	ERR1	P0CX10	437 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	ERR2	P0CX11	437 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	TOP3	P13099	656 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	BET3	P36149	193 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	NMD2	P38798	1089 aa	Known RBP	4.13	□□□□□ -1.75
SHS1	YDL225W	RRT14	P40470	206 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	AVT1	P47082	602 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	RTA1	P53047	317 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	YLL058W	Q12198	575 aa		4.13	□□□□□ -1.75
SHS1	YDL225W	AFR1	P33304	620 aa		4.12	□□□□□ -1.75
SHS1	YDL225W	ABZ1	P37254	787 aa	Predicted RBP	4.12	□□□□□ -1.75
SHS1	YDL225W	CTH1	P47976	325 aa		4.12	□□□□□ -1.75
SHS1	YDL225W	SRT1	Q03175	343 aa		4.12	□□□□□ -1.75
SHS1	YDL225W	MET6	P05694	767 aa	Known RBP	4.11	□□□□□ -1.75
SHS1	YDL225W	PHO8	P11491	566 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	NPP1	P25353	742 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	DOM34	P33309	386 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	HSP78	P33416	811 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	POL12	P38121	705 aa	Predicted RBP	4.11	□□□□□ -1.75
SHS1	YDL225W	ECL1	P48235	211 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	ORC3	P54790	616 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	LCD1	Q04377	747 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	YOR352W	Q08816	343 aa		4.11	□□□□□ -1.75
SHS1	YDL225W	MSD1	P15179	658 aa	Known RBP	4.1	□□□□□ -1.75
SHS1	YDL225W	SCT1	P32784	759 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	PET10	P36139	283 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	HFM1	P51979	1187 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	YLR125W	Q12138	136 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	TOM70	P07213	617 aa	Known RBP	4.1	□□□□□ -1.75
SHS1	YDL225W	APL1	P27351	700 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	ERT1	P38140	529 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	TSL1	P38427	1098 aa	Known RBP	4.1	□□□□□ -1.75
SHS1	YDL225W	GIC1	P38785	314 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	NPP2	P39997	493 aa		4.1	□□□□□ -1.75
SHS1	YDL225W	UBP6	P43593	499 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms