RNA–Protein interactions for RNA: YDL048C

STP4, Transcript of Protein containing a Kruppel-type zinc-finger domain, yeast

Gene STP4, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STP4	YDL048C	DBP10	Q12389	995 aa	Known RBP	5.36	□□□□□ -1.55
STP4	YDL048C	MCM5	P29496	775 aa	Known RBP	5.35	□□□□□ -1.55
STP4	YDL048C	HSP78	P33416	811 aa		5.35	□□□□□ -1.55
STP4	YDL048C	ESL2	P36168	1195 aa		5.35	□□□□□ -1.55
STP4	YDL048C	UBP5	P39944	805 aa		5.35	□□□□□ -1.55
STP4	YDL048C	OCA1	P50946	238 aa	Predicted RBP	5.35	□□□□□ -1.55
STP4	YDL048C	YBL113C	Q7M4S9	792 aa		5.35	□□□□□ -1.55
STP4	YDL048C	FOB1	O13329	566 aa		5.34	□□□□□ -1.55
STP4	YDL048C	SWI6	P09959	803 aa		5.34	□□□□□ -1.55
STP4	YDL048C	APN1	P22936	367 aa		5.34	□□□□□ -1.55
STP4	YDL048C	ABZ1	P37254	787 aa	Predicted RBP	5.34	□□□□□ -1.55
STP4	YDL048C	OPY1	P38271	328 aa		5.34	□□□□□ -1.55
STP4	YDL048C	UBP12	P39538	1254 aa		5.34	□□□□□ -1.55
STP4	YDL048C	MON1	P53129	644 aa		5.34	□□□□□ -1.55
STP4	YDL048C	YGR045C	P53229	120 aa		5.34	□□□□□ -1.55
STP4	YDL048C	ALG12	P53730	551 aa		5.34	□□□□□ -1.55
STP4	YDL048C	VMS1	Q04311	632 aa	Known RBP	5.34	□□□□□ -1.55
STP4	YDL048C	POB3	Q04636	552 aa	Known RBP	5.34	□□□□□ -1.55
STP4	YDL048C	ISA1	Q07821	250 aa	Predicted RBP	5.34	□□□□□ -1.55
STP4	YDL048C	YRM1	Q12340	786 aa		5.34	□□□□□ -1.55
STP4	YDL048C	NAT1	P12945	854 aa	Known RBP	5.33	□□□□□ -1.56
STP4	YDL048C	THR4	P16120	514 aa	Known RBP	5.33	□□□□□ -1.56
STP4	YDL048C	RXT2	P38255	430 aa		5.33	□□□□□ -1.56
STP4	YDL048C	PAF1	P38351	445 aa		5.33	□□□□□ -1.56
STP4	YDL048C	MXR1	P40029	184 aa		5.33	□□□□□ -1.56
STP4	YDL048C	JJJ1	P53863	590 aa		5.33	□□□□□ -1.56
STP4	YDL048C	TAP42	Q04372	366 aa		5.33	□□□□□ -1.56
STP4	YDL048C	NUT2	Q06213	157 aa		5.33	□□□□□ -1.56
STP4	YDL048C	ARR1	Q06596	294 aa		5.33	□□□□□ -1.56
STP4	YDL048C	HMI1	Q12039	706 aa		5.33	□□□□□ -1.56
STP4	YDL048C	SPS1	P08458	490 aa		5.32	□□□□□ -1.56
STP4	YDL048C	MER1	P16523	270 aa		5.32	□□□□□ -1.56
STP4	YDL048C	PHO84	P25297	587 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	EFB1	P32471	206 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	ETP1	P38748	585 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	MEF2	P39677	819 aa		5.32	□□□□□ -1.56
STP4	YDL048C	DOT6	P40059	670 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.32	□□□□□ -1.56	not detected
STP4	YDL048C	REX2	P54964	269 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	HOM3	P10869	527 aa		5.32	□□□□□ -1.56
STP4	YDL048C	HMG1	P12683	1054 aa		5.32	□□□□□ -1.56
STP4	YDL048C	SRP54	P20424	541 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	RPB4	P20433	221 aa	Predicted RBP	5.32	□□□□□ -1.56
STP4	YDL048C	GAS1	P22146	559 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	NFS1	P25374	497 aa		5.32	□□□□□ -1.56
STP4	YDL048C	SMY1	P32364	656 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	GCD6	P32501	712 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	IME2	P32581	645 aa		5.32	□□□□□ -1.56
STP4	YDL048C	SMY2	P32909	740 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	RRP8	P38961	392 aa	Known RBP	5.32	□□□□□ -1.56
STP4	YDL048C	NIT1	P40447	199 aa		5.32	□□□□□ -1.56
STP4	YDL048C	ARV1	Q06541	321 aa		5.32	□□□□□ -1.56
STP4	YDL048C	NOC3	Q07896	663 aa	Predicted RBP	5.32	□□□□□ -1.56
STP4	YDL048C	CIT2	P08679	460 aa		5.31	□□□□□ -1.56
STP4	YDL048C	SEC23	P15303	768 aa	Known RBP	5.31	□□□□□ -1.56
STP4	YDL048C	ADP1	P25371	1049 aa		5.31	□□□□□ -1.56
STP4	YDL048C	KRR1	P25586	316 aa	Predicted RBP	5.31	□□□□□ -1.56
STP4	YDL048C	SRP40	P32583	406 aa	Predicted RBP	5.31	□□□□□ -1.56
STP4	YDL048C	JNM1	P36224	373 aa		5.31	□□□□□ -1.56
STP4	YDL048C	ARL1	P38116	183 aa	Known RBP	5.31	□□□□□ -1.56
STP4	YDL048C	EXO5	P38289	585 aa		5.31	□□□□□ -1.56
STP4	YDL048C	PEX7	P39108	375 aa		5.31	□□□□□ -1.56
STP4	YDL048C	RVS167	P39743	482 aa	Known RBP	5.31	□□□□□ -1.56
STP4	YDL048C	SDS3	P40505	327 aa		5.31	□□□□□ -1.56
STP4	YDL048C	YNL050C	P53952	270 aa		5.31	□□□□□ -1.56
STP4	YDL048C	PNG1	Q02890	363 aa		5.31	□□□□□ -1.56
STP4	YDL048C	SSY1	Q03770	852 aa		5.31	□□□□□ -1.56
STP4	YDL048C	ATG26	Q06321	1198 aa		5.31	□□□□□ -1.56
STP4	YDL048C	NDL1	Q06568	189 aa		5.31	□□□□□ -1.56
STP4	YDL048C	TRE1	Q08919	783 aa		5.31	□□□□□ -1.56
STP4	YDL048C	HAT1	Q12341	374 aa		5.31	□□□□□ -1.56
STP4	YDL048C	RKM4	Q12504	494 aa		5.31	□□□□□ -1.56
STP4	YDL048C	INH1	P01097	85 aa		5.3	□□□□□ -1.56
STP4	YDL048C	KAR3	P17119	729 aa		5.3	□□□□□ -1.56
STP4	YDL048C	COY1	P34237	679 aa		5.3	□□□□□ -1.56
STP4	YDL048C	ATG19	P35193	415 aa		5.3	□□□□□ -1.56
STP4	YDL048C	RKM3	P38222	552 aa		5.3	□□□□□ -1.56
STP4	YDL048C	EFM2	P38347	419 aa		5.3	□□□□□ -1.56
STP4	YDL048C	OTU2	P38747	307 aa	Known RBP	5.3	□□□□□ -1.56
STP4	YDL048C	HSE1	P38753	452 aa		5.3	□□□□□ -1.56
STP4	YDL048C	APE4	P38821	490 aa		5.3	□□□□□ -1.56
STP4	YDL048C	SLS1	P42900	643 aa		5.3	□□□□□ -1.56
STP4	YDL048C	SMC3	P47037	1230 aa		5.3	□□□□□ -1.56
STP4	YDL048C	DSL1	P53847	754 aa		5.3	□□□□□ -1.56
STP4	YDL048C	SVF1	Q05515	481 aa		5.3	□□□□□ -1.56
STP4	YDL048C	SMD2	Q06217	110 aa	Known RBP	5.3	□□□□□ -1.56
STP4	YDL048C	BRR1	Q99177	341 aa	Predicted RBP	5.3	□□□□□ -1.56
STP4	YDL048C	HNM1	P19807	563 aa		5.29	□□□□□ -1.56
STP4	YDL048C	ACE2	P21192	770 aa		5.29	□□□□□ -1.56
STP4	YDL048C	SSK22	P25390	1331 aa	Predicted RBP	5.29	□□□□□ -1.56
STP4	YDL048C	AAD3	P25612	363 aa		5.29	□□□□□ -1.56
STP4	YDL048C	NNK1	P36003	928 aa		5.29	□□□□□ -1.56
STP4	YDL048C	NEM1	P38757	446 aa		5.29	□□□□□ -1.56
STP4	YDL048C	YAP1801	P38856	637 aa		5.29	□□□□□ -1.56
STP4	YDL048C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
STP4	YDL048C	ARB1	P40024	610 aa	Known RBP	5.29	□□□□□ -1.56
STP4	YDL048C	IRR1	P40541	1150 aa		5.29	□□□□□ -1.56
STP4	YDL048C	SET2	P46995	733 aa	Known RBP	5.29	□□□□□ -1.56
STP4	YDL048C	RNH1	Q04740	348 aa		5.29	□□□□□ -1.56
STP4	YDL048C	SPP382	Q06411	708 aa	Predicted RBP	5.29	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms