RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YER152CP10356 443 aa4.72□□□□□ -1.65
PRP11YDL043C RNA1P11745 407 aaKnown RBP4.72□□□□□ -1.65
PRP11YDL043C MSD1P15179 658 aaKnown RBP4.72□□□□□ -1.65
PRP11YDL043C PDC5P16467 563 aaKnown RBP4.72□□□□□ -1.65
PRP11YDL043C SAC7P17121 654 aa4.72□□□□□ -1.65
PRP11YDL043C GSY1P23337 708 aa4.72□□□□□ -1.65
PRP11YDL043C MEF1P25039 761 aa4.72□□□□□ -1.65
PRP11YDL043C KNS1P32350 737 aaPredicted RBP4.72□□□□□ -1.65
PRP11YDL043C ENP1P38333 483 aaKnown RBP4.72□□□□□ -1.65
PRP11YDL043C DSS1P39112 969 aa4.72□□□□□ -1.65
PRP11YDL043C YGR237CP50089 785 aa4.72□□□□□ -1.65
PRP11YDL043C FOL1P53848 824 aa4.72□□□□□ -1.65
PRP11YDL043C DUS3Q06053 668 aaKnown RBP4.72□□□□□ -1.65
PRP11YDL043C YPR071WQ12346 211 aa4.72□□□□□ -1.65
PRP11YDL043C TY4B-PA0A0B7P3V8 1104 aa4.71□□□□□ -1.66
PRP11YDL043C RPL11AP0C0W9 174 aaKnown RBP4.71□□□□□ -1.66
PRP11YDL043C RAD53P22216 821 aa4.71□□□□□ -1.66
PRP11YDL043C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
PRP11YDL043C NFS1P25374 497 aa4.71□□□□□ -1.66
PRP11YDL043C PPH3P32345 308 aa4.71□□□□□ -1.66
PRP11YDL043C FUN12P39730 1002 aaKnown RBP4.71□□□□□ -1.66
PRP11YDL043C ELA1P53861 379 aaPredicted RBP4.71□□□□□ -1.66
PRP11YDL043C RSA3Q05942 220 aaKnown RBP4.71□□□□□ -1.66
PRP11YDL043C YLR001CQ07895 862 aa4.71□□□□□ -1.66
PRP11YDL043C THI73Q07904 523 aa4.71□□□□□ -1.66
PRP11YDL043C SPO21Q12411 609 aa4.71□□□□□ -1.66
PRP11YDL043C RPL11BQ3E757 174 aaPredicted RBP4.71□□□□□ -1.66
PRP11YDL043C TY4A-HQ6Q5P6 413 aa4.71□□□□□ -1.66
PRP11YDL043C NUP145P49687 1317 aa4.71□□□□□ -1.66
PRP11YDL043C GPM1P00950 247 aaKnown RBP4.7□□□□□ -1.66
PRP11YDL043C ADE8P04161 214 aa4.7□□□□□ -1.66
PRP11YDL043C ERS1P17261 260 aa4.7□□□□□ -1.66
PRP11YDL043C RET1P22276 1149 aaKnown RBP4.7□□□□□ -1.66
PRP11YDL043C DBP2P24783 546 aaKnown RBP4.7□□□□□ -1.66
PRP11YDL043C KIP1P28742 1111 aa4.7□□□□□ -1.66
PRP11YDL043C TOA1P32773 286 aa4.7□□□□□ -1.66
PRP11YDL043C MAE1P36013 669 aaKnown RBP4.7□□□□□ -1.66
PRP11YDL043C ALG2P43636 503 aa4.7□□□□□ -1.66
PRP11YDL043C MDG1P53885 366 aa4.7□□□□□ -1.66
PRP11YDL043C SRP1Q02821 542 aaKnown RBP4.7□□□□□ -1.66
PRP11YDL043C GIN4Q12263 1142 aa4.7□□□□□ -1.66
PRP11YDL043C TMA17Q12513 150 aa4.7□□□□□ -1.66
PRP11YDL043C QCR6P00127 147 aa4.69□□□□□ -1.66
PRP11YDL043C VBA3P25594 458 aa4.69□□□□□ -1.66
PRP11YDL043C CDC12P32468 407 aaKnown RBP4.69□□□□□ -1.66
PRP11YDL043C PGM2P37012 569 aaKnown RBP4.69□□□□□ -1.66
PRP11YDL043C YRO2P38079 344 aa4.69□□□□□ -1.66
PRP11YDL043C ALG14P38242 237 aa4.69□□□□□ -1.66
PRP11YDL043C SEC26P41810 973 aaKnown RBP4.69□□□□□ -1.66
PRP11YDL043C SDA1P53313 767 aaKnown RBP4.69□□□□□ -1.66
PRP11YDL043C SUB1P54000 292 aaKnown RBP4.69□□□□□ -1.66
PRP11YDL043C ALO1P54783 526 aaKnown RBP4.69□□□□□ -1.66
PRP11YDL043C UME1Q03010 460 aa4.69□□□□□ -1.66
PRP11YDL043C BUL2Q03758 920 aaKnown RBP4.69□□□□□ -1.66
PRP11YDL043C LCD1Q04377 747 aa4.69□□□□□ -1.66
PRP11YDL043C PHR1P05066 565 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
PRP11YDL043C RPN3P40016 523 aaKnown RBP4.68□□□□□ -1.66
PRP11YDL043C MXR1P40029 184 aa4.68□□□□□ -1.66
PRP11YDL043C GPG1P53130 126 aa4.68□□□□□ -1.66
PRP11YDL043C PEX8P53248 589 aa4.68□□□□□ -1.66
PRP11YDL043C DSE4P53753 1117 aa4.68□□□□□ -1.66
PRP11YDL043C YLR257WQ06146 321 aaKnown RBP4.68□□□□□ -1.66
PRP11YDL043C YOR223WQ12015 292 aa4.68□□□□□ -1.66
PRP11YDL043C PLP2Q12017 286 aa4.68□□□□□ -1.66
PRP11YDL043C CDC9P04819 755 aa4.67□□□□□ -1.66
PRP11YDL043C YCK2P23292 546 aaKnown RBP4.67□□□□□ -1.66
PRP11YDL043C AFR1P33304 620 aa4.67□□□□□ -1.66
PRP11YDL043C YEL1P34225 687 aa4.67□□□□□ -1.66
PRP11YDL043C NNK1P36003 928 aa4.67□□□□□ -1.66
PRP11YDL043C MCX1P38323 520 aaPredicted RBP4.67□□□□□ -1.66
PRP11YDL043C GPB2P39717 880 aa4.67□□□□□ -1.66
PRP11YDL043C SAH1P39954 449 aaKnown RBP4.67□□□□□ -1.66
PRP11YDL043C MGS1P40151 587 aa4.67□□□□□ -1.66
PRP11YDL043C TOK1P40310 691 aa4.67□□□□□ -1.66
PRP11YDL043C KIP3P53086 805 aaKnown RBP4.67□□□□□ -1.66
PRP11YDL043C DOT1Q04089 582 aaKnown RBP4.67□□□□□ -1.66
PRP11YDL043C NHA1Q99271 985 aa4.67□□□□□ -1.66
PRP11YDL043C PRO1P32264 428 aa4.66□□□□□ -1.66
PRP11YDL043C SEC6P32844 805 aa4.66□□□□□ -1.66
PRP11YDL043C SMY2P32909 740 aaKnown RBP4.66□□□□□ -1.66
PRP11YDL043C SLA2P33338 968 aa4.66□□□□□ -1.66
PRP11YDL043C SPC29P33419 253 aa4.66□□□□□ -1.66
PRP11YDL043C YKL151CP36059 337 aa4.66□□□□□ -1.66
PRP11YDL043C YJR120WP47157 116 aa4.66□□□□□ -1.66
PRP11YDL043C VPS72Q03388 795 aa4.66□□□□□ -1.66
PRP11YDL043C HRQ1Q05549 1077 aa4.66□□□□□ -1.66
PRP11YDL043C HRK1Q08732 759 aaKnown RBP4.66□□□□□ -1.66
PRP11YDL043C ACM1Q08981 209 aa4.66□□□□□ -1.66
PRP11YDL043C FAP7Q12055 197 aaPredicted RBP4.66□□□□□ -1.66
PRP11YDL043C HIF1Q12373 385 aa4.66□□□□□ -1.66
PRP11YDL043C SRD1P09007 221 aa4.65□□□□□ -1.67
PRP11YDL043C NPP1P25353 742 aa4.65□□□□□ -1.67
PRP11YDL043C SWE1P32944 819 aa4.65□□□□□ -1.67
PRP11YDL043C REC104P33323 182 aa4.65□□□□□ -1.67
PRP11YDL043C MTC2P34246 357 aa4.65□□□□□ -1.67
PRP11YDL043C TYS1P36421 394 aaKnown RBP4.65□□□□□ -1.67
PRP11YDL043C BAP2P38084 609 aa4.65□□□□□ -1.67
PRP11YDL043C ERT1P38140 529 aa4.65□□□□□ -1.67
PRP11YDL043C RIX1P38883 763 aaPredicted RBP4.65□□□□□ -1.67
PRP11YDL043C PMC1P38929 1173 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms