RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	AST1	P35183	429 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	SPP381	P38282	291 aa	Predicted RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	FZO1	P38297	855 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	SET5	P38890	526 aa	Known RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	SHC1	P39000	512 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	GDH3	P39708	457 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	RPA14	P50106	137 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	SPP382	Q06411	708 aa	Predicted RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	RUD3	Q12234	484 aa	Known RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	NCA2	Q12374	616 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	TY4A-H	Q6Q5P6	413 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	HEM1	P09950	548 aa	Predicted RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	SLA2	P33338	968 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	UTP11	P34247	250 aa	Predicted RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	YET1	P35723	206 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	SET1	P38827	1080 aa	Known RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	MDR1	P53258	950 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	VTI1	Q04338	217 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	UTP4	Q06679	776 aa	Known RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	BRE1	Q07457	700 aa	Known RBP	4.42	□□□□□ -1.7
PIM1	YBL022C	TAF10	Q12030	206 aa		4.42	□□□□□ -1.7
PIM1	YBL022C	PPR1	P07272	904 aa	Predicted RBP	4.41	□□□□□ -1.7
PIM1	YBL022C	CDC3	P32457	520 aa	Known RBP	4.41	□□□□□ -1.7
PIM1	YBL022C	OAF3	P36023	863 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	RPC37	P36121	282 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	MMS21	P38632	267 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	AST2	P39945	430 aa	Known RBP	4.41	□□□□□ -1.7
PIM1	YBL022C	RPH1	P39956	796 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	RSM28	Q03430	361 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	YIG1	Q08956	461 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
PIM1	YBL022C	VPS5	Q92331	675 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	RIF1	P29539	1916 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	YMR085W	P0CF18	432 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	VPS1	P21576	704 aa	Known RBP	4.41	□□□□□ -1.7
PIM1	YBL022C	YHB1	P39676	399 aa	Known RBP	4.41	□□□□□ -1.7
PIM1	YBL022C	VFA1	P40080	203 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	ITT1	Q04638	464 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	NCR1	Q12200	1170 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	APC2	Q12440	853 aa		4.41	□□□□□ -1.7
PIM1	YBL022C	TOM70	P07213	617 aa	Known RBP	4.4	□□□□□ -1.7
PIM1	YBL022C	CBP3	P21560	335 aa		4.4	□□□□□ -1.7
PIM1	YBL022C	SPS22	P25380	463 aa		4.4	□□□□□ -1.7
PIM1	YBL022C	SWC3	P31376	625 aa		4.4	□□□□□ -1.7
PIM1	YBL022C	YKL091C	P33324	310 aa	Known RBP	4.4	□□□□□ -1.7
PIM1	YBL022C	PTC3	P34221	468 aa	Known RBP	4.4	□□□□□ -1.7
PIM1	YBL022C	ADE17	P38009	592 aa	Known RBP	4.4	□□□□□ -1.7
PIM1	YBL022C	BCD1	P38772	366 aa		4.4	□□□□□ -1.7
PIM1	YBL022C	TDA11	P38854	504 aa		4.4	□□□□□ -1.7
PIM1	YBL022C	BTN2	P53286	410 aa		4.4	□□□□□ -1.7
PIM1	YBL022C	COX20	Q04935	205 aa		4.4	□□□□□ -1.7
PIM1	YBL022C	HIS3	P06633	220 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	LPD1	P09624	499 aa	Known RBP	4.4	□□□□□ -1.71
PIM1	YBL022C	PRP9	P19736	530 aa	Known RBP	4.4	□□□□□ -1.71
PIM1	YBL022C	HSP30	P25619	332 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	ITR2	P30606	609 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	MIP6	P38760	659 aa	Known RBP	4.4	□□□□□ -1.71
PIM1	YBL022C	IRR1	P40541	1150 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	STB2	P46679	850 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	YGR237C	P50089	785 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	COP1	P53622	1201 aa	Known RBP	4.4	□□□□□ -1.71
PIM1	YBL022C	DML1	Q03652	475 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	MLH2	Q07980	695 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	IOC2	Q12072	812 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	MDM20	Q12387	796 aa	Known RBP	4.4	□□□□□ -1.71
PIM1	YBL022C	MST1	P07236	462 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	SAP185	P40856	1058 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	DIG1	Q03063	452 aa	Known RBP	4.4	□□□□□ -1.71
PIM1	YBL022C	YLR001C	Q07895	862 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	SAM3	Q08986	587 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	YOR111W	Q99210	232 aa		4.4	□□□□□ -1.71
PIM1	YBL022C	ERG11	P10614	530 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	PDR1	P12383	1068 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	MET4	P32389	672 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	KIC1	P38692	1080 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	CIC1	P38779	376 aa	Known RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	PET100	P38958	111 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	NOC2	P39744	710 aa	Known RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	ATG32	P40458	529 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	HXT10	P43581	546 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	LSC2	P53312	427 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	ATP25	Q03153	612 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	PLP1	Q04004	230 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	AFT2	Q08957	416 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	SGT2	Q12118	346 aa	Known RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	ENT3	P47160	408 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	LSC1	P53598	329 aa	Known RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	CWC15	Q03772	175 aa	Known RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	GPI17	Q04080	534 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	YPR172W	Q06608	200 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	ALR1	Q08269	859 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	ADR1	P07248	1323 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	KIN2	P13186	1147 aa	Known RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	BMH1	P29311	267 aa	Known RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	VPH2	P32341	215 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	YHL012W	P38709	493 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	YHR112C	P38716	378 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	CAJ1	P39101	391 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	GTR1	Q00582	310 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	YML108W	Q03759	105 aa		4.39	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms