RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 GNAI1P63096 354 aa13.15□□□□□ -0.3
PHGDH-224ENST00000641711 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-224ENST00000641711 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
PHGDH-224ENST00000641711 CHL1O00533 1208 aa13.14□□□□□ -0.31
PHGDH-224ENST00000641711 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
PHGDH-224ENST00000641711 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
PHGDH-224ENST00000641711 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
PHGDH-224ENST00000641711 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
PHGDH-224ENST00000641711 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
PHGDH-224ENST00000641711 BCAR3O75815 825 aa13.13□□□□□ -0.31
PHGDH-224ENST00000641711 HOXB7P09629 217 aa13.13□□□□□ -0.31
PHGDH-224ENST00000641711 ZNF853P0CG23 659 aa13.13□□□□□ -0.31
PHGDH-224ENST00000641711 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
PHGDH-224ENST00000641711 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
PHGDH-224ENST00000641711 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
PHGDH-224ENST00000641711 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
PHGDH-224ENST00000641711 CACNA1FO60840 1977 aa13.12□□□□□ -0.31
PHGDH-224ENST00000641711 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
PHGDH-224ENST00000641711 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
PHGDH-224ENST00000641711 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
PHGDH-224ENST00000641711 ZNF496Q96IT1 587 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-224ENST00000641711 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
PHGDH-224ENST00000641711 CASZ1Q86V15 1759 aa13.12□□□□□ -0.31
PHGDH-224ENST00000641711 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
PHGDH-224ENST00000641711 FANCIQ9NVI1 1328 aa13.12□□□□□ -0.31
PHGDH-224ENST00000641711 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
PHGDH-224ENST00000641711 STARD3NLO95772 234 aa13.11□□□□□ -0.31
PHGDH-224ENST00000641711 EIF4A1P60842 406 aaKnown RBP13.11□□□□□ -0.31
PHGDH-224ENST00000641711 AAMPQ13685 434 aa13.11□□□□□ -0.31
PHGDH-224ENST00000641711 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
PHGDH-224ENST00000641711 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
PHGDH-224ENST00000641711 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
PHGDH-224ENST00000641711 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
PHGDH-224ENST00000641711 MS4A1P11836 297 aa13.1□□□□□ -0.31
PHGDH-224ENST00000641711 ITPK1Q13572 414 aa13.1□□□□□ -0.31
PHGDH-224ENST00000641711 AK7Q96M32 723 aa13.1□□□□□ -0.31
PHGDH-224ENST00000641711 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-224ENST00000641711 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
PHGDH-224ENST00000641711 SSFA2P28290 1259 aa13.09□□□□□ -0.31
PHGDH-224ENST00000641711 COL24A1Q17RW2 1714 aa13.09□□□□□ -0.31
PHGDH-224ENST00000641711 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-224ENST00000641711 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
PHGDH-224ENST00000641711 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-224ENST00000641711 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-224ENST00000641711 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
PHGDH-224ENST00000641711 DNAJC10Q8IXB1 793 aa13.08□□□□□ -0.32
PHGDH-224ENST00000641711 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
PHGDH-224ENST00000641711 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
PHGDH-224ENST00000641711 KCNQ3O43525 872 aa13.07□□□□□ -0.32
PHGDH-224ENST00000641711 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
PHGDH-224ENST00000641711 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
PHGDH-224ENST00000641711 SLC16A10Q8TF71 515 aa13.07□□□□□ -0.32
PHGDH-224ENST00000641711 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
PHGDH-224ENST00000641711 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
PHGDH-224ENST00000641711 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
PHGDH-224ENST00000641711 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
PHGDH-224ENST00000641711 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
PHGDH-224ENST00000641711 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
PHGDH-224ENST00000641711 RGL2O15211 777 aa13.05□□□□□ -0.32
PHGDH-224ENST00000641711 GNPATO15228 680 aa13.05□□□□□ -0.32
PHGDH-224ENST00000641711 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-224ENST00000641711 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
PHGDH-224ENST00000641711 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
PHGDH-224ENST00000641711 LRP5O75197 1615 aa13.05□□□□□ -0.32
PHGDH-224ENST00000641711 A0A087WZG4 1122 aa13.04□□□□□ -0.32
PHGDH-224ENST00000641711 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
PHGDH-224ENST00000641711 KCNQ4P56696 695 aa13.04□□□□□ -0.32
PHGDH-224ENST00000641711 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
PHGDH-224ENST00000641711 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
PHGDH-224ENST00000641711 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
PHGDH-224ENST00000641711 COL15A1P39059 1388 aa13.04□□□□□ -0.32
PHGDH-224ENST00000641711 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-224ENST00000641711 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-224ENST00000641711 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
PHGDH-224ENST00000641711 ZBTB1Q9Y2K1 713 aa13.03□□□□□ -0.32
PHGDH-224ENST00000641711 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
PHGDH-224ENST00000641711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
PHGDH-224ENST00000641711 KCNA4P22459 653 aa13.02□□□□□ -0.33
PHGDH-224ENST00000641711 EIF5P55010 431 aaKnown RBP13.02□□□□□ -0.33
PHGDH-224ENST00000641711 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
PHGDH-224ENST00000641711 ZKSCAN2Q63HK3 967 aa13.02□□□□□ -0.33
PHGDH-224ENST00000641711 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
PHGDH-224ENST00000641711 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
PHGDH-224ENST00000641711 CLUAP1Q96AJ1 413 aa13.02□□□□□ -0.33
PHGDH-224ENST00000641711 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
PHGDH-224ENST00000641711 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-224ENST00000641711 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
PHGDH-224ENST00000641711 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
PHGDH-224ENST00000641711 MTFR1LQ9H019 292 aa13□□□□□ -0.33
PHGDH-224ENST00000641711 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
PHGDH-224ENST00000641711 COG6Q9Y2V7 657 aa13□□□□□ -0.33
PHGDH-224ENST00000641711 KIF16BQ96L93 1317 aa12.99□□□□□ -0.33
PHGDH-224ENST00000641711 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
PHGDH-224ENST00000641711 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
PHGDH-224ENST00000641711 RLBP1P12271 317 aa12.99□□□□□ -0.33
PHGDH-224ENST00000641711 RFC4P35249 363 aa12.99□□□□□ -0.33
PHGDH-224ENST00000641711 TWISTNBQ3B726 338 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-224ENST00000641711 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
PHGDH-224ENST00000641711 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-224ENST00000641711 SMC4Q9NTJ3 1288 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms