RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 C8orf34Q49A92 452 aa16.93■□□□□ 0.3
SCARB2-208ENST00000638372 ARHGEF12Q9NZN5 1544 aa16.93■□□□□ 0.3
SCARB2-208ENST00000638372 ESPNB1AK53 854 aa16.93■□□□□ 0.3
SCARB2-208ENST00000638372 CADPS2Q86UW7 1296 aa16.93■□□□□ 0.3
SCARB2-208ENST00000638372 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
SCARB2-208ENST00000638372 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 CCDC70Q6NSX1 233 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 ANKRD13DQ6ZTN6 518 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 SERPINC1P01008 464 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 TXLNAP40222 546 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 MINDY4BA8MYZ0 360 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 GOLIM4O00461 696 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
SCARB2-208ENST00000638372 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
SCARB2-208ENST00000638372 EYA1Q99502 592 aa16.91■□□□□ 0.3
SCARB2-208ENST00000638372 PDE1AP54750 535 aa16.91■□□□□ 0.3
SCARB2-208ENST00000638372 COPS6Q7L5N1 327 aa16.91■□□□□ 0.3
SCARB2-208ENST00000638372 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
SCARB2-208ENST00000638372 TEX14Q8IWB6 1497 aa16.91■□□□□ 0.3
SCARB2-208ENST00000638372 OFD1O75665 1012 aa16.91■□□□□ 0.3
SCARB2-208ENST00000638372 CDKL5O76039 1030 aa16.91■□□□□ 0.3
SCARB2-208ENST00000638372 SNRPA1P09661 255 aaKnown RBP16.91■□□□□ 0.3
SCARB2-208ENST00000638372 KCNA6P17658 529 aa16.9■□□□□ 0.3
SCARB2-208ENST00000638372 COL17A1Q9UMD9 1497 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-208ENST00000638372 NPATQ14207 1427 aa16.9■□□□□ 0.3
SCARB2-208ENST00000638372 EXOC5O00471 708 aa16.9■□□□□ 0.3
SCARB2-208ENST00000638372 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
SCARB2-208ENST00000638372 XAGE3Q8WTP9 111 aa16.9■□□□□ 0.3
SCARB2-208ENST00000638372 EVI5LQ96CN4 794 aa16.9■□□□□ 0.3
SCARB2-208ENST00000638372 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.3
SCARB2-208ENST00000638372 TNNT3P45378 269 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-208ENST00000638372 CCT2P78371 535 aaKnown RBP16.89■□□□□ 0.29
SCARB2-208ENST00000638372 GPS2Q13227 327 aa16.89■□□□□ 0.29
SCARB2-208ENST00000638372 CDK5RAP3Q96JB5 506 aa16.89■□□□□ 0.29
SCARB2-208ENST00000638372 NAPBQ9H115 298 aa16.89■□□□□ 0.29
SCARB2-208ENST00000638372 SH2B1Q9NRF2 756 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-208ENST00000638372 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.29
SCARB2-208ENST00000638372 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-208ENST00000638372 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.29
SCARB2-208ENST00000638372 TCEANC2Q96MN5 208 aa16.89■□□□□ 0.29
SCARB2-208ENST00000638372 UHRF1BP1Q6BDS2 1440 aa16.88■□□□□ 0.29
SCARB2-208ENST00000638372 SEC24BO95487 1268 aa16.88■□□□□ 0.29
SCARB2-208ENST00000638372 MAP3K11Q16584 847 aa16.88■□□□□ 0.29
SCARB2-208ENST00000638372 FILIP1LQ4L180 1135 aa16.88■□□□□ 0.29
SCARB2-208ENST00000638372 ABCC2Q92887 1545 aa16.88■□□□□ 0.29
SCARB2-208ENST00000638372 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-208ENST00000638372 DDX46Q7L014 1031 aaKnown RBP16.87■□□□□ 0.29
SCARB2-208ENST00000638372 MAGI3Q5TCQ9 1506 aa16.87■□□□□ 0.29
SCARB2-208ENST00000638372 HAND2P61296 217 aa16.87■□□□□ 0.29
SCARB2-208ENST00000638372 YTHDC2Q9H6S0 1430 aaKnown RBP16.87■□□□□ 0.29
SCARB2-208ENST00000638372 EPS15P42566 896 aa16.87■□□□□ 0.29
SCARB2-208ENST00000638372 CEP57L1Q8IYX8 460 aa16.87■□□□□ 0.29
SCARB2-208ENST00000638372 FLT4P35916 1363 aa16.87■□□□□ 0.29
SCARB2-208ENST00000638372 RBM5P52756 815 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCARB2-208ENST00000638372 PA2G4Q9UQ80 394 aaKnown RBP16.87■□□□□ 0.29
SCARB2-208ENST00000638372 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
SCARB2-208ENST00000638372 ZMYM3Q14202 1370 aa16.87■□□□□ 0.29
SCARB2-208ENST00000638372 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
SCARB2-208ENST00000638372 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
SCARB2-208ENST00000638372 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
SCARB2-208ENST00000638372 ZNF213O14771 459 aa16.86■□□□□ 0.29
SCARB2-208ENST00000638372 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-208ENST00000638372 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-208ENST00000638372 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
SCARB2-208ENST00000638372 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 MAP3K12Q12852 859 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-208ENST00000638372 SCAND2PQ9GZW5 306 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-208ENST00000638372 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 GRM8O00222 908 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 EIF2AK4Q9P2K8 1649 aaKnown RBP16.85■□□□□ 0.29
SCARB2-208ENST00000638372 GCP02774 474 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 CAVIN4Q5BKX8 364 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 TMX3Q96JJ7 454 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 C8orf76Q96K31 380 aa16.85■□□□□ 0.29
SCARB2-208ENST00000638372 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
SCARB2-208ENST00000638372 ZPR1O75312 459 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 CWF19L2Q2TBE0 894 aaKnown RBP16.84■□□□□ 0.29
SCARB2-208ENST00000638372 SOGA3Q5TF21 947 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 CEP85Q6P2H3 762 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 CKAP2LQ8IYA6 745 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 FAM177A1Q8N128 213 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-208ENST00000638372 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 ABCC1P33527 1531 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 PDIA4P13667 645 aaKnown RBP16.84■□□□□ 0.29
SCARB2-208ENST00000638372 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 DCTPP1Q9H773 170 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 NOL7Q9UMY1 257 aaKnown RBP16.84■□□□□ 0.29
SCARB2-208ENST00000638372 KRT18P05783 430 aaKnown RBP16.84■□□□□ 0.29
SCARB2-208ENST00000638372 LMBR1LQ6UX01 489 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 ZHX3Q9H4I2 956 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 GJB2P29033 226 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
SCARB2-208ENST00000638372 ARGLU1Q9NWB6 273 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-208ENST00000638372 STX6O43752 255 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms