RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PUF60Q9UHX1 559 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 SLC12A7Q9Y666 1083 aa18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 NLRP5P59047 1200 aa18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 TMEM266Q2M3C6 531 aa18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 DUSP27Q5VZP5 1158 aa18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-221ENST00000636012 ECM2O94769 699 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 SPTY2D1Q68D10 685 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 ZNF213O14771 459 aa18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 IPO4Q8TEX9 1081 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 VTI1AQ96AJ9 217 aa18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 POGZQ7Z3K3 1410 aa18.52■□□□□ 0.56
CACNA1A-221ENST00000636012 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.55
CACNA1A-221ENST00000636012 USP8P40818 1118 aa18.52■□□□□ 0.55
CACNA1A-221ENST00000636012 SSRP1Q08945 709 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-221ENST00000636012 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.55
CACNA1A-221ENST00000636012 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-221ENST00000636012 SLF2Q8IX21 1173 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 ZFP91Q96JP5 570 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 HOOK3Q86VS8 718 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 KIF1BPQ96EK5 621 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 RAB34Q9BZG1 259 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 MAP3K11Q16584 847 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 SYCP3Q8IZU3 236 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 TIGD1Q96MW7 591 aa18.51■□□□□ 0.55
CACNA1A-221ENST00000636012 VPS36Q86VN1 386 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 FGFR1OPO95684 399 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 CCDC196A0A1B0GTZ2 297 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 WAPLQ7Z5K2 1190 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 UQCRHLA0A096LP55 91 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 UQCRHP07919 91 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 IFFO1Q0D2I5 559 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 CATIPQ7Z7H3 387 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 FERMT3Q86UX7 667 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
CACNA1A-221ENST00000636012 SPATA24Q86W54 205 aa18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 NUP88Q99567 741 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 CCDC8Q9H0W5 538 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 MMRN2Q9H8L6 949 aa18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 CFTRP13569 1480 aa18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 ZMYND15Q9H091 742 aa18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 IFIT3O14879 490 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 BAG4O95429 457 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-221ENST00000636012 CRACR2AQ9BSW2 395 aa18.48■□□□□ 0.55
CACNA1A-221ENST00000636012 PRPF40BQ6NWY9 871 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-221ENST00000636012 LUZP1Q86V48 1076 aa18.48■□□□□ 0.55
CACNA1A-221ENST00000636012 ZNF354CQ86Y25 554 aa18.48■□□□□ 0.55
CACNA1A-221ENST00000636012 GRPEL1Q9HAV7 217 aa18.48■□□□□ 0.55
CACNA1A-221ENST00000636012 SLC52A1Q9NWF4 448 aa18.48■□□□□ 0.55
CACNA1A-221ENST00000636012 A0A087WZG4 1122 aa18.48■□□□□ 0.55
CACNA1A-221ENST00000636012 SYCE3A1L190 88 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 TDRD12Q587J7 1177 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 ANKRD18BA2A2Z9 1011 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 RFC4P35249 363 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 MAP3K9P80192 1104 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 FLIIQ13045 1269 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 RAB11FIP3O75154 756 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 HECW1Q76N89 1606 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 CCDC175P0C221 793 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
CACNA1A-221ENST00000636012 TMPOP42166 694 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 LMAN1P49257 510 aa18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 TCERG1LQ5VWI1 586 aa18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 BICD1Q96G01 975 aa18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 CCDC160A6NGH7 325 aa18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 KIF5CO60282 957 aa18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-221ENST00000636012 CKAP2LQ8IYA6 745 aa18.45■□□□□ 0.54
CACNA1A-221ENST00000636012 MYO1BO43795 1136 aa18.45■□□□□ 0.54
CACNA1A-221ENST00000636012 TMCO3Q6UWJ1 677 aa18.45■□□□□ 0.54
CACNA1A-221ENST00000636012 CPLX3Q8WVH0 158 aa18.45■□□□□ 0.54
CACNA1A-221ENST00000636012 TAF7Q15545 349 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-221ENST00000636012 CCDC194A0A1B0GVG4 234 aa18.45■□□□□ 0.54
CACNA1A-221ENST00000636012 EPRSP07814 1512 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-221ENST00000636012 CNNM3Q8NE01 707 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 PABPN1LA6NDY0 278 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 CFAP57Q96MR6 1250 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 CLEC11AQ9Y240 323 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 EXOC5O00471 708 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 GOLGA8BA8MQT2 603 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 PRC1O43663 620 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 CALML4Q96GE6 196 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 ISM2Q6H9L7 571 aa18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 DDX46Q7L014 1031 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-221ENST00000636012 FCHSD2O94868 740 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms