RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 FSD2A1L4K1 749 aa21.89■■□□□ 1.09
PCF11-207ENST00000624931 G2E3Q7L622 706 aa21.89■■□□□ 1.09
PCF11-207ENST00000624931 HSCBQ8IWL3 235 aa21.89■■□□□ 1.09
PCF11-207ENST00000624931 FNBP4Q8N3X1 1017 aaPredicted RBP21.89■■□□□ 1.09
PCF11-207ENST00000624931 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.89■■□□□ 1.09
PCF11-207ENST00000624931 GLI3P10071 1580 aa21.88■■□□□ 1.09
PCF11-207ENST00000624931 ZNF790Q6PG37 636 aa21.88■■□□□ 1.09
PCF11-207ENST00000624931 SNX21Q969T3 373 aa21.88■■□□□ 1.09
PCF11-207ENST00000624931 RGS12O14924 1447 aa21.88■■□□□ 1.09
PCF11-207ENST00000624931 PAPPAQ13219 1627 aa21.88■■□□□ 1.09
PCF11-207ENST00000624931 SLC4A2P04920 1241 aa21.87■■□□□ 1.09
PCF11-207ENST00000624931 EIF2S2P20042 333 aaKnown RBP21.87■■□□□ 1.09
PCF11-207ENST00000624931 VPS72Q15906 364 aa21.87■■□□□ 1.09
PCF11-207ENST00000624931 HDGFL1Q5TGJ6 251 aa21.87■■□□□ 1.09
PCF11-207ENST00000624931 TMEM57Q8N5G2 664 aa21.87■■□□□ 1.09
PCF11-207ENST00000624931 USP21Q9UK80 565 aa21.87■■□□□ 1.09
PCF11-207ENST00000624931 THRAP3Q9Y2W1 955 aaKnown RBP21.87■■□□□ 1.09
PCF11-207ENST00000624931 HEG1Q9ULI3 1381 aa21.87■■□□□ 1.09
PCF11-207ENST00000624931 EXOC5O00471 708 aa21.86■■□□□ 1.09
PCF11-207ENST00000624931 CIZ1Q9ULV3 898 aaPredicted RBP21.86■■□□□ 1.09
PCF11-207ENST00000624931 PRKCSHP14314 528 aaPredicted RBP21.86■■□□□ 1.09
PCF11-207ENST00000624931 FAM98CQ17RN3 349 aaKnown RBP21.86■■□□□ 1.09
PCF11-207ENST00000624931 DOT1LQ8TEK3 1739 aa21.85■■□□□ 1.09
PCF11-207ENST00000624931 AFF2P51816 1311 aa21.85■■□□□ 1.09
PCF11-207ENST00000624931 ERVV-2B6SEH9 535 aa21.85■■□□□ 1.09
PCF11-207ENST00000624931 RBM25P49756 843 aaKnown RBP21.85■■□□□ 1.09
PCF11-207ENST00000624931 CCDC30Q5VVM6 783 aa21.85■■□□□ 1.09
PCF11-207ENST00000624931 ITPRIPQ8IWB1 547 aa21.85■■□□□ 1.09
PCF11-207ENST00000624931 ZNF496Q96IT1 587 aaPredicted RBP21.85■■□□□ 1.09
PCF11-207ENST00000624931 ITGB4P16144 1822 aa21.85■■□□□ 1.09
PCF11-207ENST00000624931 GIGYF1O75420 1035 aaPredicted RBP21.84■■□□□ 1.09
PCF11-207ENST00000624931 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
PCF11-207ENST00000624931 ABCC4O15439 1325 aa21.84■■□□□ 1.09
PCF11-207ENST00000624931 SOS1Q07889 1333 aaPredicted RBP21.84■■□□□ 1.09
PCF11-207ENST00000624931 DDB1Q16531 1140 aa21.83■■□□□ 1.09
PCF11-207ENST00000624931 STK31Q9BXU1 1019 aa21.83■■□□□ 1.09
PCF11-207ENST00000624931 UBR2Q8IWV8 1755 aa21.83■■□□□ 1.09
PCF11-207ENST00000624931 ANXA1P04083 346 aa21.83■■□□□ 1.08
PCF11-207ENST00000624931 MRE11P49959 708 aa21.83■■□□□ 1.08
PCF11-207ENST00000624931 MFAP1P55081 439 aaKnown RBP21.83■■□□□ 1.08
PCF11-207ENST00000624931 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.08
PCF11-207ENST00000624931 CDCA7Q9BWT1 371 aaPredicted RBP21.83■■□□□ 1.08
PCF11-207ENST00000624931 ZBTB40Q9NUA8 1239 aa21.83■■□□□ 1.08
PCF11-207ENST00000624931 KCPQ6ZWJ8 1503 aa21.82■■□□□ 1.08
PCF11-207ENST00000624931 HOXB7P09629 217 aa21.82■■□□□ 1.08
PCF11-207ENST00000624931 TTC5Q8N0Z6 440 aa21.82■■□□□ 1.08
PCF11-207ENST00000624931 CHPF2Q9P2E5 772 aa21.82■■□□□ 1.08
PCF11-207ENST00000624931 API5Q9BZZ5 524 aaKnown RBP21.81■■□□□ 1.08
PCF11-207ENST00000624931 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.81■■□□□ 1.08
PCF11-207ENST00000624931 TRAK2O60296 914 aa21.8■■□□□ 1.08
PCF11-207ENST00000624931 NUCB1Q02818 461 aa21.8■■□□□ 1.08
PCF11-207ENST00000624931 MARCH10Q8NA82 808 aaPredicted RBP21.8■■□□□ 1.08
PCF11-207ENST00000624931 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
PCF11-207ENST00000624931 PROSER3Q2NL68 480 aa21.79■■□□□ 1.08
PCF11-207ENST00000624931 PHAXQ9H814 394 aaKnown RBP21.79■■□□□ 1.08
PCF11-207ENST00000624931 PTPRCP08575 1304 aa21.79■■□□□ 1.08
PCF11-207ENST00000624931 THSD7AQ9UPZ6 1657 aa21.78■■□□□ 1.08
PCF11-207ENST00000624931 F6X3S4 739 aa21.78■■□□□ 1.08
PCF11-207ENST00000624931 XRCC6P12956 609 aaKnown RBP eCLIP21.78■■□□□ 1.082e-13■□□□□ 8.8
PCF11-207ENST00000624931 FLIIQ13045 1269 aa21.78■■□□□ 1.08
PCF11-207ENST00000624931 SKOR2Q2VWA4 1001 aaPredicted RBP21.78■■□□□ 1.08
PCF11-207ENST00000624931 PIGBQ92521 554 aa21.78■■□□□ 1.08
PCF11-207ENST00000624931 GCC1Q96CN9 775 aa21.78■■□□□ 1.08
PCF11-207ENST00000624931 LAMB4A4D0S4 1761 aa21.78■■□□□ 1.08
PCF11-207ENST00000624931 FMNL2Q96PY5 1086 aa21.77■■□□□ 1.08
PCF11-207ENST00000624931 CACNA1FO60840 1977 aa21.77■■□□□ 1.08
PCF11-207ENST00000624931 A0A0G2JS52 829 aa21.77■■□□□ 1.08
PCF11-207ENST00000624931 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
PCF11-207ENST00000624931 ATRNO75882 1429 aa21.76■■□□□ 1.07
PCF11-207ENST00000624931 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
PCF11-207ENST00000624931 DDIT3P35638 169 aa21.76■■□□□ 1.07
PCF11-207ENST00000624931 SYTL4Q96C24 671 aaPredicted RBP21.76■■□□□ 1.07
PCF11-207ENST00000624931 PTCD1O75127 700 aaKnown RBP21.75■■□□□ 1.07
PCF11-207ENST00000624931 FKBP5Q13451 457 aaPredicted RBP21.75■■□□□ 1.07
PCF11-207ENST00000624931 ACSBG1Q96GR2 724 aa21.75■■□□□ 1.07
PCF11-207ENST00000624931 GBP4Q96PP9 640 aa21.75■■□□□ 1.07
PCF11-207ENST00000624931 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
PCF11-207ENST00000624931 PIP4K2AP48426 406 aaPredicted RBP21.75■■□□□ 1.07
PCF11-207ENST00000624931 CHD1LQ86WJ1 897 aa21.75■■□□□ 1.07
PCF11-207ENST00000624931 USP16Q9Y5T5 823 aa21.75■■□□□ 1.07
PCF11-207ENST00000624931 BCL9O00512 1426 aa21.74■■□□□ 1.07
PCF11-207ENST00000624931 SNRPA1P09661 255 aaKnown RBP21.74■■□□□ 1.07
PCF11-207ENST00000624931 PRIM1P49642 420 aaKnown RBP21.74■■□□□ 1.07
PCF11-207ENST00000624931 ATG3Q9NT62 314 aa21.73■■□□□ 1.07
PCF11-207ENST00000624931 CLCN1P35523 988 aa21.72■■□□□ 1.07
PCF11-207ENST00000624931 PDIA6Q15084 440 aa21.72■■□□□ 1.07
PCF11-207ENST00000624931 SLC4A10Q6U841 1118 aa21.72■■□□□ 1.07
PCF11-207ENST00000624931 GJD4Q96KN9 370 aaPredicted RBP21.72■■□□□ 1.07
PCF11-207ENST00000624931 RRAGDQ9NQL2 400 aaPredicted RBP21.72■■□□□ 1.07
PCF11-207ENST00000624931 DBF4Q9UBU7 674 aaPredicted RBP21.72■■□□□ 1.07
PCF11-207ENST00000624931 INTS3Q68E01 1043 aaKnown RBP21.71■■□□□ 1.07
PCF11-207ENST00000624931 C1orf115Q9H7X2 142 aa21.71■■□□□ 1.07
PCF11-207ENST00000624931 ZBTB7BO15156 539 aaPredicted RBP21.7■■□□□ 1.06
PCF11-207ENST00000624931 N4BP2Q86UW6 1770 aaPredicted RBP21.7■■□□□ 1.06
PCF11-207ENST00000624931 MYL6BP14649 208 aa21.69■■□□□ 1.06
PCF11-207ENST00000624931 TRPC5Q9UL62 973 aaPredicted RBP21.69■■□□□ 1.06
PCF11-207ENST00000624931 DDX21Q9NR30 783 aaKnown RBP eCLIP21.69■■□□□ 1.06
PCF11-207ENST00000624931 FAM182BQ5T319 152 aa21.68■■□□□ 1.06
PCF11-207ENST00000624931 SPRYD3Q8NCJ5 442 aa21.68■■□□□ 1.06
PCF11-207ENST00000624931 UBE2Q2Q8WVN8 375 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms