RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 ZBTB1Q9Y2K1 713 aa28.05■■■□□ 2.08
PMPCA-212ENST00000622209 GNAT3A8MTJ3 354 aa28.04■■■□□ 2.08
PMPCA-212ENST00000622209 TTC5Q8N0Z6 440 aa28.04■■■□□ 2.08
PMPCA-212ENST00000622209 VSIG10Q8N0Z9 540 aa28.04■■■□□ 2.08
PMPCA-212ENST00000622209 RSPH6AQ9H0K4 717 aa28.04■■■□□ 2.08
PMPCA-212ENST00000622209 POLRMTO00411 1230 aaKnown RBP28.03■■■□□ 2.08
PMPCA-212ENST00000622209 CANXP27824 592 aaKnown RBP28.03■■■□□ 2.08
PMPCA-212ENST00000622209 TEFQ10587 303 aa28.03■■■□□ 2.08
PMPCA-212ENST00000622209 KCPQ6ZWJ8 1503 aa28.02■■■□□ 2.08
PMPCA-212ENST00000622209 PIM2Q9P1W9 311 aa28.01■■■□□ 2.07
PMPCA-212ENST00000622209 NARFQ9UHQ1 456 aa28.01■■■□□ 2.07
PMPCA-212ENST00000622209 CHRNA5P30532 468 aa28■■■□□ 2.07
PMPCA-212ENST00000622209 PRKAR2BP31323 418 aa28■■■□□ 2.07
PMPCA-212ENST00000622209 PHACTR3Q96KR7 559 aa28■■■□□ 2.07
PMPCA-212ENST00000622209 N4BP2Q86UW6 1770 aaPredicted RBP28■■■□□ 2.07
PMPCA-212ENST00000622209 ZNF496Q96IT1 587 aaPredicted RBP27.99■■■□□ 2.07
PMPCA-212ENST00000622209 KIF13BQ9NQT8 1826 aa27.99■■■□□ 2.07
PMPCA-212ENST00000622209 COL15A1P39059 1388 aa27.99■■■□□ 2.07
PMPCA-212ENST00000622209 KIAA1551Q9HCM1 1747 aa27.98■■■□□ 2.07
PMPCA-212ENST00000622209 STARD3NLO95772 234 aa27.98■■■□□ 2.07
PMPCA-212ENST00000622209 NFIXQ14938 502 aa27.98■■■□□ 2.07
PMPCA-212ENST00000622209 DALRD3Q5D0E6 543 aaKnown RBP27.98■■■□□ 2.07
PMPCA-212ENST00000622209 ZNF790Q6PG37 636 aa27.97■■■□□ 2.07
PMPCA-212ENST00000622209 BCL2L12Q9HB09 334 aa27.97■■■□□ 2.07
PMPCA-212ENST00000622209 ANP32CO43423 234 aa27.96■■■□□ 2.07
PMPCA-212ENST00000622209 PNNQ9H307 717 aaKnown RBP27.96■■■□□ 2.07
PMPCA-212ENST00000622209 ADAMTS7Q9UKP4 1686 aa27.94■■■□□ 2.06
PMPCA-212ENST00000622209 EIF5P55010 431 aaKnown RBP27.93■■■□□ 2.06
PMPCA-212ENST00000622209 ZNF330Q9Y3S2 320 aaPredicted RBP27.93■■■□□ 2.06
PMPCA-212ENST00000622209 CEP350Q5VT06 3117 aa27.93■■■□□ 2.06
PMPCA-212ENST00000622209 HEG1Q9ULI3 1381 aa27.92■■■□□ 2.06
PMPCA-212ENST00000622209 KIF3CO14782 793 aa27.92■■■□□ 2.06
PMPCA-212ENST00000622209 KCNQ3O43525 872 aa27.92■■■□□ 2.06
PMPCA-212ENST00000622209 SERPINB2P05120 415 aa27.92■■■□□ 2.06
PMPCA-212ENST00000622209 C9orf131Q5VYM1 1079 aa27.92■■■□□ 2.06
PMPCA-212ENST00000622209 BICDL1Q6ZP65 573 aa27.92■■■□□ 2.06
PMPCA-212ENST00000622209 NEFMP07197 916 aa27.91■■■□□ 2.06
PMPCA-212ENST00000622209 FMNL2Q96PY5 1086 aa27.91■■■□□ 2.06
PMPCA-212ENST00000622209 TEX13AQ9BXU3 409 aaPredicted RBP27.91■■■□□ 2.06
PMPCA-212ENST00000622209 A0A087WZG4 1122 aa27.9■■■□□ 2.06
PMPCA-212ENST00000622209 BTBD11A6QL63 1104 aa27.9■■■□□ 2.06
PMPCA-212ENST00000622209 PLEKHF1Q96S99 279 aa27.89■■■□□ 2.06
PMPCA-212ENST00000622209 CEMIPQ8WUJ3 1361 aa27.88■■■□□ 2.05
PMPCA-212ENST00000622209 A1BGP04217 495 aa27.88■■■□□ 2.05
PMPCA-212ENST00000622209 TBC1D2BQ9UPU7 963 aa27.88■■■□□ 2.05
PMPCA-212ENST00000622209 WDR43Q15061 677 aaKnown RBP eCLIP27.87■■■□□ 2.05
PMPCA-212ENST00000622209 MCM10Q7L590 875 aa27.87■■■□□ 2.05
PMPCA-212ENST00000622209 RTF1Q92541 710 aaKnown RBP27.86■■■□□ 2.05
PMPCA-212ENST00000622209 HSPA6P17066 643 aa27.85■■■□□ 2.05
PMPCA-212ENST00000622209 TBC1D9BQ66K14 1250 aa27.85■■■□□ 2.05
PMPCA-212ENST00000622209 NMRK2Q9NPI5 230 aa27.85■■■□□ 2.05
PMPCA-212ENST00000622209 IL6STP40189 918 aaPredicted RBP27.84■■■□□ 2.05
PMPCA-212ENST00000622209 C2CD5Q86YS7 1000 aa27.84■■■□□ 2.05
PMPCA-212ENST00000622209 RNF181Q9P0P0 153 aa27.84■■■□□ 2.05
PMPCA-212ENST00000622209 DCTN1Q14203 1278 aa27.83■■■□□ 2.05
PMPCA-212ENST00000622209 NPM2Q86SE8 214 aaKnown RBP27.83■■■□□ 2.05
PMPCA-212ENST00000622209 MAPK8IP3Q9UPT6 1336 aa27.83■■■□□ 2.05
PMPCA-212ENST00000622209 UBR2Q8IWV8 1755 aa27.83■■■□□ 2.05
PMPCA-212ENST00000622209 VIRMAQ69YN4 1812 aaKnown RBP27.83■■■□□ 2.05
PMPCA-212ENST00000622209 HTATSF1O43719 755 aaKnown RBP27.82■■■□□ 2.04
PMPCA-212ENST00000622209 USP16Q9Y5T5 823 aa27.82■■■□□ 2.04
PMPCA-212ENST00000622209 H0YIN7 160 aa27.81■■■□□ 2.04
PMPCA-212ENST00000622209 CCDC24Q8N4L8 307 aa27.81■■■□□ 2.04
PMPCA-212ENST00000622209 ADAMTS8Q9UP79 889 aa27.81■■■□□ 2.04
PMPCA-212ENST00000622209 PRAMEF22A3QJZ6 481 aa27.8■■■□□ 2.04
PMPCA-212ENST00000622209 PIP4K2AP48426 406 aaPredicted RBP27.8■■■□□ 2.04
PMPCA-212ENST00000622209 TTLL6Q8N841 843 aa27.8■■■□□ 2.04
PMPCA-212ENST00000622209 CARMIL3Q8ND23 1372 aa27.8■■■□□ 2.04
PMPCA-212ENST00000622209 BRCA1P38398 1863 aaKnown RBP27.79■■■□□ 2.04
PMPCA-212ENST00000622209 RASSF7Q02833 373 aa27.79■■■□□ 2.04
PMPCA-212ENST00000622209 NFE2L2Q16236 605 aa27.79■■■□□ 2.04
PMPCA-212ENST00000622209 TOMM70O94826 608 aa27.78■■■□□ 2.04
PMPCA-212ENST00000622209 CAMTA2O94983 1202 aa27.77■■■□□ 2.04
PMPCA-212ENST00000622209 SNRPA1P09661 255 aaKnown RBP27.76■■■□□ 2.03
PMPCA-212ENST00000622209 CCDC184Q52MB2 194 aa27.76■■■□□ 2.03
PMPCA-212ENST00000622209 DZIP3Q86Y13 1208 aaKnown RBP27.76■■■□□ 2.03
PMPCA-212ENST00000622209 RUNDC1Q96C34 613 aa27.76■■■□□ 2.03
PMPCA-212ENST00000622209 SETDB2Q96T68 719 aa27.76■■■□□ 2.03
PMPCA-212ENST00000622209 PRR5LQ6MZQ0 368 aa27.75■■■□□ 2.03
PMPCA-212ENST00000622209 ZNF622Q969S3 477 aaKnown RBP eCLIP27.75■■■□□ 2.035e-7■□□□□ 9.2
PMPCA-212ENST00000622209 SIPA1L3O60292 1781 aaPredicted RBP27.74■■■□□ 2.03
PMPCA-212ENST00000622209 BRIP1Q9BX63 1249 aa27.74■■■□□ 2.03
PMPCA-212ENST00000622209 MIS18AQ9NYP9 233 aa27.74■■■□□ 2.03
PMPCA-212ENST00000622209 ARFGEF1Q9Y6D6 1849 aa27.74■■■□□ 2.03
PMPCA-212ENST00000622209 KDM2BQ8NHM5 1336 aa27.73■■■□□ 2.03
PMPCA-212ENST00000622209 NPHP1O15259 732 aa27.73■■■□□ 2.03
PMPCA-212ENST00000622209 PDE6BP35913 854 aa27.73■■■□□ 2.03
PMPCA-212ENST00000622209 RRAGCQ9HB90 399 aa27.73■■■□□ 2.03
PMPCA-212ENST00000622209 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
PMPCA-212ENST00000622209 ZNF219Q9P2Y4 722 aaPredicted RBP27.73■■■□□ 2.03
PMPCA-212ENST00000622209 AFDNP55196 1824 aaKnown RBP27.73■■■□□ 2.03
PMPCA-212ENST00000622209 NRXN2Q9P2S2 1712 aa27.72■■■□□ 2.03
PMPCA-212ENST00000622209 TAF7Q15545 349 aaPredicted RBP27.72■■■□□ 2.03
PMPCA-212ENST00000622209 CCDC146Q8IYE0 955 aa27.72■■■□□ 2.03
PMPCA-212ENST00000622209 C16orf71Q8IYS4 520 aaPredicted RBP27.72■■■□□ 2.03
PMPCA-212ENST00000622209 PRELPP51888 382 aa27.71■■■□□ 2.03
PMPCA-212ENST00000622209 LMNB1P20700 586 aa27.7■■■□□ 2.02
PMPCA-212ENST00000622209 TMPOP42166 694 aaKnown RBP27.7■■■□□ 2.02
PMPCA-212ENST00000622209 CNBD1Q8NA66 436 aa27.7■■■□□ 2.02
PMPCA-212ENST00000622209 PNISRQ8TF01 805 aaKnown RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms