RNA–Protein interactions for RNA: ENST00000620208.1

AC009560.1-201, humanhuman

BASIC

Gene AC009560.1, Length 434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009560.1-201ENST00000620208 CD2APQ9Y5K6 639 aa18.64■□□□□ 0.57
AC009560.1-201ENST00000620208 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
AC009560.1-201ENST00000620208 TJP1Q07157 1748 aa18.63■□□□□ 0.57
AC009560.1-201ENST00000620208 MIS18AQ9NYP9 233 aa18.63■□□□□ 0.57
AC009560.1-201ENST00000620208 TRIM35Q9UPQ4 493 aa18.63■□□□□ 0.57
AC009560.1-201ENST00000620208 ANP32CO43423 234 aa18.62■□□□□ 0.57
AC009560.1-201ENST00000620208 TM4SF1P30408 202 aa18.62■□□□□ 0.57
AC009560.1-201ENST00000620208 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
AC009560.1-201ENST00000620208 NARFQ9UHQ1 456 aa18.62■□□□□ 0.57
AC009560.1-201ENST00000620208 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
AC009560.1-201ENST00000620208 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
AC009560.1-201ENST00000620208 IL6STP40189 918 aaPredicted RBP18.61■□□□□ 0.57
AC009560.1-201ENST00000620208 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
AC009560.1-201ENST00000620208 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
AC009560.1-201ENST00000620208 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
AC009560.1-201ENST00000620208 A1BGP04217 495 aa18.6■□□□□ 0.57
AC009560.1-201ENST00000620208 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
AC009560.1-201ENST00000620208 VIRMAQ69YN4 1812 aaKnown RBP18.6■□□□□ 0.57
AC009560.1-201ENST00000620208 A0A087WZG4 1122 aa18.59■□□□□ 0.57
AC009560.1-201ENST00000620208 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
AC009560.1-201ENST00000620208 GIGYF1O75420 1035 aaPredicted RBP18.59■□□□□ 0.57
AC009560.1-201ENST00000620208 MMP10P09238 476 aa18.59■□□□□ 0.57
AC009560.1-201ENST00000620208 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
AC009560.1-201ENST00000620208 FKBP8Q14318 412 aa18.59■□□□□ 0.57
AC009560.1-201ENST00000620208 BCL2L12Q9HB09 334 aa18.59■□□□□ 0.57
AC009560.1-201ENST00000620208 CHL1O00533 1208 aa18.58■□□□□ 0.56
AC009560.1-201ENST00000620208 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
AC009560.1-201ENST00000620208 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.56
AC009560.1-201ENST00000620208 ZPR1O75312 459 aa18.57■□□□□ 0.56
AC009560.1-201ENST00000620208 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
AC009560.1-201ENST00000620208 NLGN2Q8NFZ4 835 aa18.57■□□□□ 0.56
AC009560.1-201ENST00000620208 NBPF26B4DH59 902 aa18.56■□□□□ 0.56
AC009560.1-201ENST00000620208 APAF1O14727 1248 aa18.56■□□□□ 0.56
AC009560.1-201ENST00000620208 NBPF10Q6P3W6 841 aaKnown RBP18.56■□□□□ 0.56
AC009560.1-201ENST00000620208 NBPF15Q8N660 670 aa18.56■□□□□ 0.56
AC009560.1-201ENST00000620208 COL15A1P39059 1388 aa18.55■□□□□ 0.56
AC009560.1-201ENST00000620208 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
AC009560.1-201ENST00000620208 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
AC009560.1-201ENST00000620208 RGL2O15211 777 aa18.54■□□□□ 0.56
AC009560.1-201ENST00000620208 DLG5Q8TDM6 1919 aa18.53■□□□□ 0.56
AC009560.1-201ENST00000620208 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
AC009560.1-201ENST00000620208 ZNF853P0CG23 659 aa18.53■□□□□ 0.56
AC009560.1-201ENST00000620208 TGFB2P61812 414 aa18.53■□□□□ 0.56
AC009560.1-201ENST00000620208 DDR1Q08345 913 aa18.53■□□□□ 0.56
AC009560.1-201ENST00000620208 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
AC009560.1-201ENST00000620208 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
AC009560.1-201ENST00000620208 UTRNP46939 3433 aa18.52■□□□□ 0.56
AC009560.1-201ENST00000620208 NFIXQ14938 502 aa18.52■□□□□ 0.56
AC009560.1-201ENST00000620208 CFAP44Q96MT7 982 aa18.52■□□□□ 0.56
AC009560.1-201ENST00000620208 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
AC009560.1-201ENST00000620208 CCDC27Q2M243 656 aa18.51■□□□□ 0.55
AC009560.1-201ENST00000620208 CLEC4GQ6UXB4 293 aa18.51■□□□□ 0.55
AC009560.1-201ENST00000620208 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
AC009560.1-201ENST00000620208 TBC1D2BQ9UPU7 963 aa18.51■□□□□ 0.55
AC009560.1-201ENST00000620208 KLHL34Q8N239 644 aa18.49■□□□□ 0.55
AC009560.1-201ENST00000620208 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
AC009560.1-201ENST00000620208 PDIA6Q15084 440 aa18.48■□□□□ 0.55
AC009560.1-201ENST00000620208 LRP10Q7Z4F1 713 aa18.48■□□□□ 0.55
AC009560.1-201ENST00000620208 DZIP3Q86Y13 1208 aaKnown RBP18.48■□□□□ 0.55
AC009560.1-201ENST00000620208 GOLGB1Q14789 3259 aaKnown RBP18.47■□□□□ 0.55
AC009560.1-201ENST00000620208 KCNA3P22001 575 aa18.47■□□□□ 0.55
AC009560.1-201ENST00000620208 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
AC009560.1-201ENST00000620208 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
AC009560.1-201ENST00000620208 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
AC009560.1-201ENST00000620208 C10orf71Q711Q0 1435 aa18.47■□□□□ 0.55
AC009560.1-201ENST00000620208 C4AP0C0L4 1744 aa18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 SERPINB2P05120 415 aa18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 GPR162Q16538 588 aa18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 TBC1D9BQ66K14 1250 aa18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.55
AC009560.1-201ENST00000620208 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
AC009560.1-201ENST00000620208 HOXB7P09629 217 aa18.45■□□□□ 0.54
AC009560.1-201ENST00000620208 GNAI1P63096 354 aa18.44■□□□□ 0.54
AC009560.1-201ENST00000620208 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
AC009560.1-201ENST00000620208 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
AC009560.1-201ENST00000620208 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
AC009560.1-201ENST00000620208 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
AC009560.1-201ENST00000620208 DPEP1P16444 411 aa18.42■□□□□ 0.54
AC009560.1-201ENST00000620208 SETDB2Q96T68 719 aa18.42■□□□□ 0.54
AC009560.1-201ENST00000620208 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
AC009560.1-201ENST00000620208 PXDNLA1KZ92 1463 aa18.41■□□□□ 0.54
AC009560.1-201ENST00000620208 HLFQ16534 295 aa18.41■□□□□ 0.54
AC009560.1-201ENST00000620208 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
AC009560.1-201ENST00000620208 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
AC009560.1-201ENST00000620208 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
AC009560.1-201ENST00000620208 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
AC009560.1-201ENST00000620208 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
AC009560.1-201ENST00000620208 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
AC009560.1-201ENST00000620208 DDX21Q9NR30 783 aaKnown RBP eCLIP18.4■□□□□ 0.54
AC009560.1-201ENST00000620208 ZNF652Q9Y2D9 606 aa18.4■□□□□ 0.54
AC009560.1-201ENST00000620208 IL16Q14005 1332 aa18.4■□□□□ 0.54
AC009560.1-201ENST00000620208 KIF13BQ9NQT8 1826 aa18.39■□□□□ 0.54
AC009560.1-201ENST00000620208 PRR5LQ6MZQ0 368 aa18.39■□□□□ 0.53
AC009560.1-201ENST00000620208 PDZRN3Q9UPQ7 1066 aa18.39■□□□□ 0.53
AC009560.1-201ENST00000620208 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
AC009560.1-201ENST00000620208 MYL6BP14649 208 aa18.38■□□□□ 0.53
AC009560.1-201ENST00000620208 PROSER3Q2NL68 480 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms