RNA–Protein interactions for RNA: ENST00000620208.1

AC009560.1-201, humanhuman

BASIC

Gene AC009560.1, Length 434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009560.1-201ENST00000620208 NISCHQ9Y2I1 1504 aa34.54■■■■□ 3.12
AC009560.1-201ENST00000620208 CCDC180Q9P1Z9 1646 aa30.6■■■□□ 2.49
AC009560.1-201ENST00000620208 ABCC9O60706 1549 aa30.11■■■□□ 2.41
AC009560.1-201ENST00000620208 NACADO15069 1562 aa28.92■■■□□ 2.22
AC009560.1-201ENST00000620208 RB1CC1Q8TDY2 1594 aa28.91■■■□□ 2.22
AC009560.1-201ENST00000620208 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
AC009560.1-201ENST00000620208 MYO15BQ96JP2 1530 aa28.81■■■□□ 2.2
AC009560.1-201ENST00000620208 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
AC009560.1-201ENST00000620208 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
AC009560.1-201ENST00000620208 PABPN1Q86U42 306 aaKnown RBP eCLIP28.22■■■□□ 2.11
AC009560.1-201ENST00000620208 UNC13AQ9UPW8 1703 aa28.11■■■□□ 2.09
AC009560.1-201ENST00000620208 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
AC009560.1-201ENST00000620208 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.06
AC009560.1-201ENST00000620208 SCRIBQ14160 1630 aa27.86■■■□□ 2.05
AC009560.1-201ENST00000620208 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
AC009560.1-201ENST00000620208 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
AC009560.1-201ENST00000620208 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
AC009560.1-201ENST00000620208 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
AC009560.1-201ENST00000620208 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
AC009560.1-201ENST00000620208 ATAD2BQ9ULI0 1458 aa26.73■■□□□ 1.87
AC009560.1-201ENST00000620208 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
AC009560.1-201ENST00000620208 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
AC009560.1-201ENST00000620208 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
AC009560.1-201ENST00000620208 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
AC009560.1-201ENST00000620208 PEG3Q9GZU2 1588 aa26.56■■□□□ 1.84
AC009560.1-201ENST00000620208 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
AC009560.1-201ENST00000620208 BAZ1BQ9UIG0 1483 aaKnown RBP26.4■■□□□ 1.82
AC009560.1-201ENST00000620208 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
AC009560.1-201ENST00000620208 WIZO95785 1651 aa26.19■■□□□ 1.78
AC009560.1-201ENST00000620208 NESP48681 1621 aa26.04■■□□□ 1.76
AC009560.1-201ENST00000620208 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
AC009560.1-201ENST00000620208 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
AC009560.1-201ENST00000620208 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.75
AC009560.1-201ENST00000620208 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
AC009560.1-201ENST00000620208 PDS5BQ9NTI5 1447 aa25.86■■□□□ 1.73
AC009560.1-201ENST00000620208 CUX2O14529 1486 aa25.79■■□□□ 1.72
AC009560.1-201ENST00000620208 CFTRP13569 1480 aa25.79■■□□□ 1.72
AC009560.1-201ENST00000620208 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
AC009560.1-201ENST00000620208 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
AC009560.1-201ENST00000620208 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
AC009560.1-201ENST00000620208 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.69
AC009560.1-201ENST00000620208 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
AC009560.1-201ENST00000620208 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
AC009560.1-201ENST00000620208 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
AC009560.1-201ENST00000620208 WDR62O43379 1518 aa25.45■■□□□ 1.66
AC009560.1-201ENST00000620208 URB2Q14146 1524 aaKnown RBP25.34■■□□□ 1.65
AC009560.1-201ENST00000620208 PRDM2Q13029 1718 aa25.28■■□□□ 1.64
AC009560.1-201ENST00000620208 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
AC009560.1-201ENST00000620208 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
AC009560.1-201ENST00000620208 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
AC009560.1-201ENST00000620208 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
AC009560.1-201ENST00000620208 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
AC009560.1-201ENST00000620208 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
AC009560.1-201ENST00000620208 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
AC009560.1-201ENST00000620208 CUX1P39880 1505 aa24.92■■□□□ 1.58
AC009560.1-201ENST00000620208 SOGA1O94964 1423 aa24.9■■□□□ 1.58
AC009560.1-201ENST00000620208 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
AC009560.1-201ENST00000620208 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
AC009560.1-201ENST00000620208 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
AC009560.1-201ENST00000620208 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.56
AC009560.1-201ENST00000620208 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
AC009560.1-201ENST00000620208 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
AC009560.1-201ENST00000620208 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
AC009560.1-201ENST00000620208 EIF4G3O43432 1585 aaKnown RBP24.7■■□□□ 1.54
AC009560.1-201ENST00000620208 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
AC009560.1-201ENST00000620208 TOP2BQ02880 1626 aa24.66■■□□□ 1.54
AC009560.1-201ENST00000620208 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
AC009560.1-201ENST00000620208 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
AC009560.1-201ENST00000620208 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
AC009560.1-201ENST00000620208 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
AC009560.1-201ENST00000620208 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
AC009560.1-201ENST00000620208 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
AC009560.1-201ENST00000620208 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
AC009560.1-201ENST00000620208 FBLN2P98095 1184 aa24.49■■□□□ 1.51
AC009560.1-201ENST00000620208 CHMP7Q8WUX9 453 aaPredicted RBP24.49■■□□□ 1.51
AC009560.1-201ENST00000620208 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
AC009560.1-201ENST00000620208 SYNJ2O15056 1496 aa24.43■■□□□ 1.5
AC009560.1-201ENST00000620208 CHD1O14646 1710 aa24.35■■□□□ 1.49
AC009560.1-201ENST00000620208 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
AC009560.1-201ENST00000620208 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
AC009560.1-201ENST00000620208 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
AC009560.1-201ENST00000620208 IGF1RP08069 1367 aa24.29■■□□□ 1.48
AC009560.1-201ENST00000620208 KIF27Q86VH2 1401 aa24.26■■□□□ 1.47
AC009560.1-201ENST00000620208 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
AC009560.1-201ENST00000620208 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
AC009560.1-201ENST00000620208 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
AC009560.1-201ENST00000620208 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
AC009560.1-201ENST00000620208 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
AC009560.1-201ENST00000620208 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
AC009560.1-201ENST00000620208 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
AC009560.1-201ENST00000620208 NUP160Q12769 1436 aa24.2■■□□□ 1.46
AC009560.1-201ENST00000620208 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
AC009560.1-201ENST00000620208 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
AC009560.1-201ENST00000620208 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.45
AC009560.1-201ENST00000620208 CEP170Q5SW79 1584 aa24.08■■□□□ 1.44
AC009560.1-201ENST00000620208 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
AC009560.1-201ENST00000620208 JPH4Q96JJ6 628 aa24.04■■□□□ 1.44
AC009560.1-201ENST00000620208 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
AC009560.1-201ENST00000620208 CUL7Q14999 1698 aa23.98■■□□□ 1.43
AC009560.1-201ENST00000620208 KIAA0586Q9BVV6 1533 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms