RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 GIGYF1O75420 1035 aaPredicted RBP23.71■■□□□ 1.39
MALAT1-215ENST00000619449 SNRPA1P09661 255 aaKnown RBP23.71■■□□□ 1.39
MALAT1-215ENST00000619449 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
MALAT1-215ENST00000619449 RPS6KA4O75676 772 aa23.7■■□□□ 1.38
MALAT1-215ENST00000619449 SMIM5Q71RC9 77 aa23.7■■□□□ 1.38
MALAT1-215ENST00000619449 WDR63Q8IWG1 891 aa23.7■■□□□ 1.38
MALAT1-215ENST00000619449 MBIPQ9NS73 344 aa23.7■■□□□ 1.38
MALAT1-215ENST00000619449 GNPATO15228 680 aa23.69■■□□□ 1.38
MALAT1-215ENST00000619449 SSFA2P28290 1259 aa23.69■■□□□ 1.38
MALAT1-215ENST00000619449 GNAI1P63096 354 aa23.69■■□□□ 1.38
MALAT1-215ENST00000619449 COL23A1Q86Y22 540 aaPredicted RBP23.69■■□□□ 1.38
MALAT1-215ENST00000619449 CCDC87Q9NVE4 849 aa23.69■■□□□ 1.38
MALAT1-215ENST00000619449 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
MALAT1-215ENST00000619449 ZBTB1Q9Y2K1 713 aa23.68■■□□□ 1.38
MALAT1-215ENST00000619449 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
MALAT1-215ENST00000619449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.67■■□□□ 1.38
MALAT1-215ENST00000619449 STARD3NLO95772 234 aa23.67■■□□□ 1.38
MALAT1-215ENST00000619449 FLAD1Q8NFF5 587 aa23.67■■□□□ 1.38
MALAT1-215ENST00000619449 LAS1LQ9Y4W2 734 aaKnown RBP23.67■■□□□ 1.38
MALAT1-215ENST00000619449 SOS1Q07889 1333 aaPredicted RBP23.66■■□□□ 1.38
MALAT1-215ENST00000619449 RTCBQ9Y3I0 505 aaKnown RBP23.66■■□□□ 1.38
MALAT1-215ENST00000619449 COL24A1Q17RW2 1714 aa23.65■■□□□ 1.38
MALAT1-215ENST00000619449 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
MALAT1-215ENST00000619449 SPINK5Q9NQ38 1064 aaPredicted RBP23.65■■□□□ 1.38
MALAT1-215ENST00000619449 A1BGP04217 495 aa23.64■■□□□ 1.37
MALAT1-215ENST00000619449 SLC16A10Q8TF71 515 aa23.64■■□□□ 1.37
MALAT1-215ENST00000619449 SRCAPQ6ZRS2 3230 aa23.64■■□□□ 1.37
MALAT1-215ENST00000619449 C4AP0C0L4 1744 aa23.63■■□□□ 1.37
MALAT1-215ENST00000619449 EIF5P55010 431 aaKnown RBP23.63■■□□□ 1.37
MALAT1-215ENST00000619449 ARHGEF1Q92888 912 aaKnown RBP23.63■■□□□ 1.37
MALAT1-215ENST00000619449 NBPF26B4DH59 902 aa23.61■■□□□ 1.37
MALAT1-215ENST00000619449 PHF14O94880 888 aa23.61■■□□□ 1.37
MALAT1-215ENST00000619449 TRAPPC3LQ5T215 181 aa23.61■■□□□ 1.37
MALAT1-215ENST00000619449 NBPF10Q6P3W6 841 aaKnown RBP23.61■■□□□ 1.37
MALAT1-215ENST00000619449 NBPF15Q8N660 670 aa23.61■■□□□ 1.37
MALAT1-215ENST00000619449 TSR2Q969E8 191 aaKnown RBP23.61■■□□□ 1.37
MALAT1-215ENST00000619449 HOXB7P09629 217 aa23.6■■□□□ 1.37
MALAT1-215ENST00000619449 IL6STP40189 918 aaPredicted RBP23.6■■□□□ 1.37
MALAT1-215ENST00000619449 SGIP1Q9BQI5 828 aa23.6■■□□□ 1.37
MALAT1-215ENST00000619449 MTFR1LQ9H019 292 aa23.6■■□□□ 1.37
MALAT1-215ENST00000619449 ZBTB7AO95365 584 aa23.59■■□□□ 1.37
MALAT1-215ENST00000619449 CANXP27824 592 aaKnown RBP23.59■■□□□ 1.37
MALAT1-215ENST00000619449 COL15A1P39059 1388 aa23.59■■□□□ 1.37
MALAT1-215ENST00000619449 LRP5O75197 1615 aa23.59■■□□□ 1.37
MALAT1-215ENST00000619449 PTGER2P43116 358 aa23.58■■□□□ 1.37
MALAT1-215ENST00000619449 C8orf58Q8NAV2 365 aa23.58■■□□□ 1.37
MALAT1-215ENST00000619449 FANCIQ9NVI1 1328 aa23.58■■□□□ 1.36
MALAT1-215ENST00000619449 PDIA6Q15084 440 aa23.57■■□□□ 1.36
MALAT1-215ENST00000619449 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
MALAT1-215ENST00000619449 LRP10Q7Z4F1 713 aa23.57■■□□□ 1.36
MALAT1-215ENST00000619449 ERBB4Q15303 1308 aa23.57■■□□□ 1.36
MALAT1-215ENST00000619449 PIP4K2AP48426 406 aaPredicted RBP23.56■■□□□ 1.36
MALAT1-215ENST00000619449 USP42Q9H9J4 1324 aaKnown RBP23.56■■□□□ 1.36
MALAT1-215ENST00000619449 TSPYL6Q8N831 410 aa23.55■■□□□ 1.36
MALAT1-215ENST00000619449 GYS1P13807 737 aa23.54■■□□□ 1.36
MALAT1-215ENST00000619449 RFC4P35249 363 aa23.54■■□□□ 1.36
MALAT1-215ENST00000619449 SPON1Q9HCB6 807 aa23.54■■□□□ 1.36
MALAT1-215ENST00000619449 ATF5Q9Y2D1 282 aaPredicted RBP23.54■■□□□ 1.36
MALAT1-215ENST00000619449 GOLGA2Q08379 1002 aa23.53■■□□□ 1.36
MALAT1-215ENST00000619449 TRMT2AQ8IZ69 625 aaKnown RBP23.53■■□□□ 1.36
MALAT1-215ENST00000619449 SRP68Q9UHB9 627 aaKnown RBP23.53■■□□□ 1.36
MALAT1-215ENST00000619449 NARFQ9UHQ1 456 aa23.53■■□□□ 1.36
MALAT1-215ENST00000619449 EIF2S2P20042 333 aaKnown RBP23.52■■□□□ 1.36
MALAT1-215ENST00000619449 SLFN5Q08AF3 891 aa23.52■■□□□ 1.36
MALAT1-215ENST00000619449 BCL2L12Q9HB09 334 aa23.52■■□□□ 1.36
MALAT1-215ENST00000619449 A0A087WZG4 1122 aa23.51■■□□□ 1.35
MALAT1-215ENST00000619449 PROSER3Q2NL68 480 aa23.51■■□□□ 1.35
MALAT1-215ENST00000619449 MYH16Q9H6N6 1097 aa23.51■■□□□ 1.35
MALAT1-215ENST00000619449 SCN7AQ01118 1682 aa23.51■■□□□ 1.35
MALAT1-215ENST00000619449 E9PSI1 815 aa23.5■■□□□ 1.35
MALAT1-215ENST00000619449 ELL2O00472 640 aaPredicted RBP23.5■■□□□ 1.35
MALAT1-215ENST00000619449 HDGFL1Q5TGJ6 251 aa23.5■■□□□ 1.35
MALAT1-215ENST00000619449 CDCA7LQ96GN5 454 aa23.5■■□□□ 1.35
MALAT1-215ENST00000619449 CAMTA2O94983 1202 aa23.49■■□□□ 1.35
MALAT1-215ENST00000619449 EXOSC9Q06265 439 aaKnown RBP23.49■■□□□ 1.35
MALAT1-215ENST00000619449 USPL1Q5W0Q7 1092 aa23.49■■□□□ 1.35
MALAT1-215ENST00000619449 MSL1Q68DK7 614 aa23.49■■□□□ 1.35
MALAT1-215ENST00000619449 DDX21Q9NR30 783 aaKnown RBP eCLIP23.49■■□□□ 1.35
MALAT1-215ENST00000619449 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
MALAT1-215ENST00000619449 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
MALAT1-215ENST00000619449 FKBP8Q14318 412 aa23.48■■□□□ 1.35
MALAT1-215ENST00000619449 NLGN1Q8N2Q7 840 aa23.48■■□□□ 1.35
MALAT1-215ENST00000619449 NECTIN2Q92692 538 aa23.48■■□□□ 1.35
MALAT1-215ENST00000619449 TBC1D2BQ9UPU7 963 aa23.48■■□□□ 1.35
MALAT1-215ENST00000619449 VAMP4O75379 141 aa23.47■■□□□ 1.35
MALAT1-215ENST00000619449 ANXA1P04083 346 aa23.47■■□□□ 1.35
MALAT1-215ENST00000619449 TWISTNBQ3B726 338 aaPredicted RBP23.47■■□□□ 1.35
MALAT1-215ENST00000619449 DZIP3Q86Y13 1208 aaKnown RBP23.47■■□□□ 1.35
MALAT1-215ENST00000619449 CHPF2Q9P2E5 772 aa23.47■■□□□ 1.35
MALAT1-215ENST00000619449 RGL2O15211 777 aa23.46■■□□□ 1.35
MALAT1-215ENST00000619449 ZPR1O75312 459 aa23.46■■□□□ 1.35
MALAT1-215ENST00000619449 MYL6BP14649 208 aa23.46■■□□□ 1.35
MALAT1-215ENST00000619449 ZNF330Q9Y3S2 320 aaPredicted RBP23.46■■□□□ 1.35
MALAT1-215ENST00000619449 TM4SF1P30408 202 aa23.45■■□□□ 1.34
MALAT1-215ENST00000619449 TTLL7Q6ZT98 887 aa23.45■■□□□ 1.34
MALAT1-215ENST00000619449 DBF4Q9UBU7 674 aaPredicted RBP23.45■■□□□ 1.34
MALAT1-215ENST00000619449 ZBED9Q6R2W3 1325 aa23.43■■□□□ 1.34
MALAT1-215ENST00000619449 CCDC30Q5VVM6 783 aa23.42■■□□□ 1.34
MALAT1-215ENST00000619449 CLEC4GQ6UXB4 293 aa23.42■■□□□ 1.34
MALAT1-215ENST00000619449 MAP3K15Q6ZN16 1313 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms