RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 RAD50Q92878 1312 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
CHD7-212ENST00000618450 MBD3O95983 291 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 GNAI2P04899 355 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 SRCIN1Q9C0H9 1055 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 SGSM2O43147 1006 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 LTKP29376 864 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 FLIIQ13045 1269 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHD7-212ENST00000618450 LRRCC1Q9C099 1032 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHD7-212ENST00000618450 TTC21AQ8NDW8 1320 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 NPHP4O75161 1426 aaPredicted RBP9.66□□□□□ -0.86
CHD7-212ENST00000618450 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
CHD7-212ENST00000618450 SNX14Q9Y5W7 946 aa9.66□□□□□ -0.86
CHD7-212ENST00000618450 DYNC1I1O14576 645 aa9.65□□□□□ -0.86
CHD7-212ENST00000618450 KCNF1Q9H3M0 494 aa9.65□□□□□ -0.86
CHD7-212ENST00000618450 LARGE1O95461 756 aa9.64□□□□□ -0.87
CHD7-212ENST00000618450 MTX1Q13505 466 aa9.64□□□□□ -0.87
CHD7-212ENST00000618450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.64□□□□□ -0.87
CHD7-212ENST00000618450 ADCY9O60503 1353 aa9.64□□□□□ -0.87
CHD7-212ENST00000618450 UVSSAQ2YD98 709 aa9.64□□□□□ -0.87
CHD7-212ENST00000618450 PIBF1Q8WXW3 757 aa9.64□□□□□ -0.87
CHD7-212ENST00000618450 ADGRL3Q9HAR2 1447 aa9.64□□□□□ -0.87
CHD7-212ENST00000618450 JARID2Q92833 1246 aaPredicted RBP9.64□□□□□ -0.87
CHD7-212ENST00000618450 HYPKQ9NX55 129 aa9.64□□□□□ -0.87
CHD7-212ENST00000618450 ANKARQ7Z5J8 1434 aa9.63□□□□□ -0.87
CHD7-212ENST00000618450 MYRIPQ8NFW9 859 aa9.63□□□□□ -0.87
CHD7-212ENST00000618450 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
CHD7-212ENST00000618450 TRPM3Q9HCF6 1732 aaPredicted RBP9.63□□□□□ -0.87
CHD7-212ENST00000618450 TNRQ92752 1358 aa9.63□□□□□ -0.87
CHD7-212ENST00000618450 HMMRO75330 724 aa9.63□□□□□ -0.87
CHD7-212ENST00000618450 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
CHD7-212ENST00000618450 RBM43Q6ZSC3 357 aaKnown RBP9.63□□□□□ -0.87
CHD7-212ENST00000618450 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
CHD7-212ENST00000618450 BEND3Q5T5X7 828 aa9.62□□□□□ -0.87
CHD7-212ENST00000618450 SASS6Q6UVJ0 657 aa9.62□□□□□ -0.87
CHD7-212ENST00000618450 PKNOX2Q96KN3 472 aa9.62□□□□□ -0.87
CHD7-212ENST00000618450 R3HCC1Q9Y3T6 440 aaKnown RBP9.62□□□□□ -0.87
CHD7-212ENST00000618450 SCN11AQ9UI33 1791 aa9.62□□□□□ -0.87
CHD7-212ENST00000618450 OVOS2A0A0G2JMS6 1433 aa9.62□□□□□ -0.87
CHD7-212ENST00000618450 NECTIN1Q15223 517 aa9.62□□□□□ -0.87
CHD7-212ENST00000618450 UQCRHLA0A096LP55 91 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 UQCRHP07919 91 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 SYT1P21579 422 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 CASC1Q6TDU7 716 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 TSPY26PQ9H489 355 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 UTYO14607 1347 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 GNAI3P08754 354 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 MSNP26038 577 aaKnown RBP9.61□□□□□ -0.87
CHD7-212ENST00000618450 AK2P54819 239 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
CHD7-212ENST00000618450 PHAXQ9H814 394 aaKnown RBP9.61□□□□□ -0.87
CHD7-212ENST00000618450 TSPYL4Q9UJ04 414 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 COL15A1P39059 1388 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 ZSCAN22P10073 491 aaPredicted RBP9.61□□□□□ -0.87
CHD7-212ENST00000618450 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 MTMR6Q9Y217 621 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 SLIT3O75094 1523 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 HMGN5P82970 282 aaKnown RBP9.61□□□□□ -0.87
CHD7-212ENST00000618450 ALDH8A1Q9H2A2 487 aaPredicted RBP9.61□□□□□ -0.87
CHD7-212ENST00000618450 CNPY2Q9Y2B0 182 aa9.61□□□□□ -0.87
CHD7-212ENST00000618450 RGPD5Q99666 1765 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 CTIFO43310 598 aaKnown RBP9.6□□□□□ -0.87
CHD7-212ENST00000618450 NBPF7P0C2Y1 421 aaPredicted RBP9.6□□□□□ -0.87
CHD7-212ENST00000618450 HOXC9P31274 260 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 CSPP1Q1MSJ5 1256 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 ADCK5Q3MIX3 580 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 WDR33Q9C0J8 1336 aaKnown RBP9.6□□□□□ -0.87
CHD7-212ENST00000618450 PXDNQ92626 1479 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 APBB1O00213 710 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 RBM10P98175 930 aaKnown RBP9.6□□□□□ -0.87
CHD7-212ENST00000618450 FAM184AQ8NB25 1140 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 KIAA1524Q8TCG1 905 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 RAB11FIP3O75154 756 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 ZSCAN20P17040 1043 aaPredicted RBP9.6□□□□□ -0.87
CHD7-212ENST00000618450 TM6SF1Q9BZW5 370 aa9.6□□□□□ -0.87
CHD7-212ENST00000618450 KDM4AO75164 1064 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 PTH1RQ03431 593 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 RHPN1Q8TCX5 695 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 NWD2Q9ULI1 1742 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 ABCC6O95255 1503 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 F13A1P00488 732 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 EIF4A1P60842 406 aaKnown RBP9.59□□□□□ -0.87
CHD7-212ENST00000618450 UBE2HP62256 183 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 CCDC183Q5T5S1 534 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 CCDC30Q5VVM6 783 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 PPP1R42Q7Z4L9 355 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 ANKRD7Q92527 254 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 MAP7D2Q96T17 732 aa9.59□□□□□ -0.87
CHD7-212ENST00000618450 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 TMEM94Q12767 1356 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 TJP1Q07157 1748 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 RNF214Q8ND24 703 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms