RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 PSDA5PKW4 1024 aaPredicted RBP9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 GIGYF1O75420 1035 aaPredicted RBP9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 ATXN8OSP0DMR3 200 aa9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 EIF2S2P20042 333 aaKnown RBP9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 SF3B2Q13435 895 aaKnown RBP9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 INTS3Q68E01 1043 aaKnown RBP9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 FMNL2Q96PY5 1086 aa9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 HDAC5Q9UQL6 1122 aa9.94□□□□□ -0.82
RPRD1B-208ENST00000618318 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 DDX58O95786 925 aaKnown RBP9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 SNRPA1P09661 255 aaKnown RBP9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 FLIIQ13045 1269 aa9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 FKBP5Q13451 457 aaPredicted RBP9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 SEPT12Q8IYM1 358 aa9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 ZBTB40Q9NUA8 1239 aa9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 CCDC9Q9Y3X0 531 aaKnown RBP9.93□□□□□ -0.82
RPRD1B-208ENST00000618318 HDAC1Q13547 482 aaPredicted RBP9.92□□□□□ -0.82
RPRD1B-208ENST00000618318 TNNQ9UQP3 1299 aa9.92□□□□□ -0.82
RPRD1B-208ENST00000618318 LRRC37A3O60309 1634 aa9.92□□□□□ -0.82
RPRD1B-208ENST00000618318 KDM2BQ8NHM5 1336 aa9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 THSD7AQ9UPZ6 1657 aa9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 KCNQ3O43525 872 aa9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 ONECUT3O60422 494 aaPredicted RBP9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 VPS72Q15906 364 aa9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 PIP4P2Q8N4L2 257 aa9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 TMOD3Q9NYL9 352 aa9.91□□□□□ -0.82
RPRD1B-208ENST00000618318 DISP2A7MBM2 1401 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 HEG1Q9ULI3 1381 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 RREB1Q92766 1687 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 SPATA31A1Q5TZJ5 1347 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 GNAI3P08754 354 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 BAG6P46379 1132 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 DDB1Q16531 1140 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 SLC4A10Q6U841 1118 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 KRT27Q7Z3Y8 459 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 RPAP2Q8IXW5 612 aaPredicted RBP9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 NECTIN2Q92692 538 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 DDX21Q9NR30 783 aaKnown RBP eCLIP9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 PCDHB15Q9Y5E8 787 aa9.9□□□□□ -0.82
RPRD1B-208ENST00000618318 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.83
RPRD1B-208ENST00000618318 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.83
RPRD1B-208ENST00000618318 ERBB4Q15303 1308 aa9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 SPATA31A5Q5VU36 1347 aa9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 SPATA31A7Q8IWB4 1347 aa9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 HMMRO75330 724 aa9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 GCC1Q96CN9 775 aa9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 CHPF2Q9P2E5 772 aa9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
RPRD1B-208ENST00000618318 NUP188Q5SRE5 1749 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 PKD1L3Q7Z443 1732 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 HAX1O00165 279 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 IGHDP01880 384 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 G2E3Q7L622 706 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 DNAAF4Q8WXU2 420 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 ZNF496Q96IT1 587 aaPredicted RBP9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 SRCIN1Q9C0H9 1055 aa9.88□□□□□ -0.83
RPRD1B-208ENST00000618318 ADAMTS7Q9UKP4 1686 aa9.87□□□□□ -0.83
RPRD1B-208ENST00000618318 MRC1P22897 1456 aa9.87□□□□□ -0.83
RPRD1B-208ENST00000618318 GNAI2P04899 355 aa9.87□□□□□ -0.83
RPRD1B-208ENST00000618318 KSR2Q6VAB6 950 aa9.87□□□□□ -0.83
RPRD1B-208ENST00000618318 F6X3S4 739 aa9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 ALDH1L1O75891 902 aa9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 STARD3NLO95772 234 aa9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 NEXNQ0ZGT2 675 aa9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 R3HDM1Q15032 1099 aaKnown RBP9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 PHAXQ9H814 394 aaKnown RBP9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 CACNA1FO60840 1977 aa9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 KDM3BQ7LBC6 1761 aa9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 SCN11AQ9UI33 1791 aa9.86□□□□□ -0.83
RPRD1B-208ENST00000618318 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
RPRD1B-208ENST00000618318 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
RPRD1B-208ENST00000618318 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
RPRD1B-208ENST00000618318 SMC5Q8IY18 1101 aa9.85□□□□□ -0.83
RPRD1B-208ENST00000618318 ANKRD44Q8N8A2 993 aa9.85□□□□□ -0.83
RPRD1B-208ENST00000618318 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
RPRD1B-208ENST00000618318 USP16Q9Y5T5 823 aa9.85□□□□□ -0.83
RPRD1B-208ENST00000618318 UBTFL1P0CB47 393 aaPredicted RBP9.84□□□□□ -0.83
RPRD1B-208ENST00000618318 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
RPRD1B-208ENST00000618318 NPM2Q86SE8 214 aaKnown RBP9.84□□□□□ -0.83
RPRD1B-208ENST00000618318 PIGBQ92521 554 aa9.84□□□□□ -0.83
RPRD1B-208ENST00000618318 SMARCC1Q92922 1105 aaPredicted RBP9.84□□□□□ -0.83
RPRD1B-208ENST00000618318 PDZRN3Q9UPQ7 1066 aa9.84□□□□□ -0.83
RPRD1B-208ENST00000618318 PXDNLA1KZ92 1463 aa9.84□□□□□ -0.83
RPRD1B-208ENST00000618318 TNS2Q63HR2 1409 aa9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 YY1P25490 414 aa9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 AIMP1Q12904 312 aaKnown RBP9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 BEND3Q5T5X7 828 aa9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 COPS6Q7L5N1 327 aa9.83□□□□□ -0.84
RPRD1B-208ENST00000618318 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms