RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 AMOTQ4VCS5 1084 aa15.1■□□□□ 0.01
SRRT-216ENST00000618262 AKAP4Q5JQC9 854 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 UTRNP46939 3433 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
SRRT-216ENST00000618262 PRIM1P49642 420 aaKnown RBP15.09■□□□□ 0.01
SRRT-216ENST00000618262 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 TSPYL4Q9UJ04 414 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 MAP3K5Q99683 1374 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 PRAMEF22A3QJZ6 481 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 TSPYL6Q8N831 410 aa15.09■□□□□ 0.01
SRRT-216ENST00000618262 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0
SRRT-216ENST00000618262 EXOSC9Q06265 439 aaKnown RBP15.08■□□□□ 0
SRRT-216ENST00000618262 CABP4P57796 275 aa15.08■□□□□ 0
SRRT-216ENST00000618262 CLCN1P35523 988 aa15.07■□□□□ 0
SRRT-216ENST00000618262 DNTTIP2Q5QJE6 756 aaKnown RBP15.07■□□□□ 0
SRRT-216ENST00000618262 BTBD11A6QL63 1104 aa15.07■□□□□ 0
SRRT-216ENST00000618262 PLIN1O60240 522 aa15.07■□□□□ 0
SRRT-216ENST00000618262 TPM2P07951 284 aa15.07■□□□□ 0
SRRT-216ENST00000618262 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
SRRT-216ENST00000618262 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
SRRT-216ENST00000618262 RXRBP28702 533 aa15.06■□□□□ 0
SRRT-216ENST00000618262 UTP14CQ5TAP6 766 aaKnown RBP15.06■□□□□ 0
SRRT-216ENST00000618262 ZNF521Q96K83 1311 aa15.06■□□□□ 0
SRRT-216ENST00000618262 SLFN5Q08AF3 891 aa15.06■□□□□ 0
SRRT-216ENST00000618262 OVOS2A0A0G2JMS6 1433 aa15.06■□□□□ 0
SRRT-216ENST00000618262 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
SRRT-216ENST00000618262 DUSP27Q5VZP5 1158 aa15.06■□□□□ 0
SRRT-216ENST00000618262 ZNF772Q68DY9 489 aaPredicted RBP15.06■□□□□ 0
SRRT-216ENST00000618262 FAM208AQ9UK61 1670 aaKnown RBP15.06■□□□□ 0
SRRT-216ENST00000618262 C8orf58Q8NAV2 365 aa15.05■□□□□ 0
SRRT-216ENST00000618262 ASAP1Q9ULH1 1129 aa15.05■□□□□ -0
SRRT-216ENST00000618262 ANXA1P04083 346 aa15.04■□□□□ -0
SRRT-216ENST00000618262 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
SRRT-216ENST00000618262 KDM6AO15550 1401 aaPredicted RBP15.04■□□□□ -0
SRRT-216ENST00000618262 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
SRRT-216ENST00000618262 NGEFQ8N5V2 710 aa15.03■□□□□ -0
SRRT-216ENST00000618262 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
SRRT-216ENST00000618262 BCAR3O75815 825 aa15.03■□□□□ -0
SRRT-216ENST00000618262 PIGBQ92521 554 aa15.03■□□□□ -0
SRRT-216ENST00000618262 DCAF5Q96JK2 942 aa15.03■□□□□ -0
SRRT-216ENST00000618262 PPP4R2Q9NY27 417 aa15.03■□□□□ -0
SRRT-216ENST00000618262 DLG5Q8TDM6 1919 aa15.02■□□□□ -0
SRRT-216ENST00000618262 RBM6P78332 1123 aaKnown RBP15.02■□□□□ -0
SRRT-216ENST00000618262 TAF7Q15545 349 aaPredicted RBP15.02■□□□□ -0
SRRT-216ENST00000618262 TMOD3Q9NYL9 352 aa15.02■□□□□ -0
SRRT-216ENST00000618262 TRIM37O94972 964 aa15.02□□□□□ -0.01
SRRT-216ENST00000618262 BARGINQ6ZT62 677 aa15.02□□□□□ -0.01
SRRT-216ENST00000618262 SMIM5Q71RC9 77 aa15.02□□□□□ -0.01
SRRT-216ENST00000618262 THRAP3Q9Y2W1 955 aaKnown RBP15.02□□□□□ -0.01
SRRT-216ENST00000618262 NRAPQ86VF7 1730 aa15.01□□□□□ -0.01
SRRT-216ENST00000618262 SLC52A2Q9HAB3 445 aa15.01□□□□□ -0.01
SRRT-216ENST00000618262 WDR63Q8IWG1 891 aa15.01□□□□□ -0.01
SRRT-216ENST00000618262 MYH16Q9H6N6 1097 aa15□□□□□ -0.01
SRRT-216ENST00000618262 GLI3P10071 1580 aa15□□□□□ -0.01
SRRT-216ENST00000618262 GNAI1P63096 354 aa15□□□□□ -0.01
SRRT-216ENST00000618262 CCDC27Q2M243 656 aa15□□□□□ -0.01
SRRT-216ENST00000618262 KRT27Q7Z3Y8 459 aa15□□□□□ -0.01
SRRT-216ENST00000618262 MAP7D2Q96T17 732 aa15□□□□□ -0.01
SRRT-216ENST00000618262 DISP2A7MBM2 1401 aa14.99□□□□□ -0.01
SRRT-216ENST00000618262 ATRNO75882 1429 aa14.99□□□□□ -0.01
SRRT-216ENST00000618262 TTC5Q8N0Z6 440 aa14.99□□□□□ -0.01
SRRT-216ENST00000618262 ZNF496Q96IT1 587 aaPredicted RBP14.99□□□□□ -0.01
SRRT-216ENST00000618262 NCAPD2Q15021 1401 aa14.99□□□□□ -0.01
SRRT-216ENST00000618262 MAFGO15525 162 aa14.99□□□□□ -0.01
SRRT-216ENST00000618262 CLUAP1Q96AJ1 413 aa14.99□□□□□ -0.01
SRRT-216ENST00000618262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.018e-7■□□□□ 8.8
SRRT-216ENST00000618262 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
SRRT-216ENST00000618262 CHL1O00533 1208 aa14.98□□□□□ -0.01
SRRT-216ENST00000618262 TWISTNBQ3B726 338 aaPredicted RBP14.98□□□□□ -0.01
SRRT-216ENST00000618262 IFT57Q9NWB7 429 aa14.98□□□□□ -0.01
SRRT-216ENST00000618262 ZNF790Q6PG37 636 aa14.97□□□□□ -0.01
SRRT-216ENST00000618262 MPNDQ8N594 471 aa14.97□□□□□ -0.01
SRRT-216ENST00000618262 SH3BP1Q9Y3L3 701 aa14.97□□□□□ -0.01
SRRT-216ENST00000618262 DMTNQ08495 405 aa14.97□□□□□ -0.01
SRRT-216ENST00000618262 EGFL6Q8IUX8 553 aa14.97□□□□□ -0.01
SRRT-216ENST00000618262 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
SRRT-216ENST00000618262 MYL6BP14649 208 aa14.96□□□□□ -0.01
SRRT-216ENST00000618262 NWD2Q9ULI1 1742 aa14.96□□□□□ -0.01
SRRT-216ENST00000618262 HSP90AB1P08238 724 aaKnown RBP14.96□□□□□ -0.02
SRRT-216ENST00000618262 TNS2Q63HR2 1409 aa14.95□□□□□ -0.02
SRRT-216ENST00000618262 ZNF853P0CG23 659 aa14.95□□□□□ -0.02
SRRT-216ENST00000618262 CDCA7Q9BWT1 371 aaPredicted RBP14.95□□□□□ -0.02
SRRT-216ENST00000618262 USP16Q9Y5T5 823 aa14.95□□□□□ -0.02
SRRT-216ENST00000618262 ABCC6O95255 1503 aa14.95□□□□□ -0.02
SRRT-216ENST00000618262 CEMIPQ8WUJ3 1361 aa14.95□□□□□ -0.02
SRRT-216ENST00000618262 AIMP1Q12904 312 aaKnown RBP14.94□□□□□ -0.02
SRRT-216ENST00000618262 ATG3Q9NT62 314 aa14.94□□□□□ -0.02
SRRT-216ENST00000618262 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
SRRT-216ENST00000618262 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
SRRT-216ENST00000618262 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
SRRT-216ENST00000618262 C20orf194Q5TEA3 1177 aa14.94□□□□□ -0.02
SRRT-216ENST00000618262 HTATSF1O43719 755 aaKnown RBP14.93□□□□□ -0.02
SRRT-216ENST00000618262 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
SRRT-216ENST00000618262 RGS12O14924 1447 aa14.92□□□□□ -0.02
SRRT-216ENST00000618262 VAMP4O75379 141 aa14.92□□□□□ -0.02
SRRT-216ENST00000618262 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
SRRT-216ENST00000618262 NKX1-1Q15270 411 aaPredicted RBP14.92□□□□□ -0.02
SRRT-216ENST00000618262 PROSER3Q2NL68 480 aa14.92□□□□□ -0.02
SRRT-216ENST00000618262 HDGFL1Q5TGJ6 251 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms