RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 EXOSC9Q06265 439 aaKnown RBP9.68□□□□□ -0.86
VPS45-213ENST00000618148 ILDR1Q86SU0 546 aaPredicted RBP9.68□□□□□ -0.86
VPS45-213ENST00000618148 NFATC2IPQ8NCF5 419 aa9.68□□□□□ -0.86
VPS45-213ENST00000618148 BTBD11A6QL63 1104 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 HOXB7P09629 217 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 CABP4P57796 275 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 EIF4A1P60842 406 aaKnown RBP9.67□□□□□ -0.86
VPS45-213ENST00000618148 RCAN3Q9UKA8 241 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 KCPQ6ZWJ8 1503 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 NHSQ6T4R5 1651 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 C8orf58Q8NAV2 365 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 MIS18AQ9NYP9 233 aa9.67□□□□□ -0.86
VPS45-213ENST00000618148 LAS1LQ9Y4W2 734 aaKnown RBP9.67□□□□□ -0.86
VPS45-213ENST00000618148 RGS12O14924 1447 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 CICQ96RK0 1608 aaPredicted RBP9.66□□□□□ -0.86
VPS45-213ENST00000618148 BRWD3Q6RI45 1802 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 VAMP4O75379 141 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 SEC24BO95487 1268 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
VPS45-213ENST00000618148 POTEAQ6S8J7 498 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 TSPYL6Q8N831 410 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 PIGBQ92521 554 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 TMOD3Q9NYL9 352 aa9.66□□□□□ -0.86
VPS45-213ENST00000618148 KCNQ3O43525 872 aa9.65□□□□□ -0.86
VPS45-213ENST00000618148 RXRBP28702 533 aa9.65□□□□□ -0.86
VPS45-213ENST00000618148 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
VPS45-213ENST00000618148 TWISTNBQ3B726 338 aaPredicted RBP9.65□□□□□ -0.86
VPS45-213ENST00000618148 SBF2Q86WG5 1849 aa9.65□□□□□ -0.87
VPS45-213ENST00000618148 KRT24Q2M2I5 525 aa9.64□□□□□ -0.87
VPS45-213ENST00000618148 ALDH1L2Q3SY69 923 aa9.64□□□□□ -0.87
VPS45-213ENST00000618148 TRPC6Q9Y210 931 aa9.64□□□□□ -0.87
VPS45-213ENST00000618148 ZNF831Q5JPB2 1677 aa9.64□□□□□ -0.87
VPS45-213ENST00000618148 A0A0G2JS52 829 aa9.64□□□□□ -0.87
VPS45-213ENST00000618148 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
VPS45-213ENST00000618148 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
VPS45-213ENST00000618148 MYT1Q01538 1121 aa9.64□□□□□ -0.87
VPS45-213ENST00000618148 KRT27Q7Z3Y8 459 aa9.64□□□□□ -0.87
VPS45-213ENST00000618148 ZNF496Q96IT1 587 aaPredicted RBP9.64□□□□□ -0.87
VPS45-213ENST00000618148 C5P01031 1676 aa9.63□□□□□ -0.87
VPS45-213ENST00000618148 MAP3K13O43283 966 aa9.63□□□□□ -0.87
VPS45-213ENST00000618148 SLC39A6Q13433 755 aa9.63□□□□□ -0.87
VPS45-213ENST00000618148 SSH1Q8WYL5 1049 aa9.63□□□□□ -0.87
VPS45-213ENST00000618148 ATG3Q9NT62 314 aa9.63□□□□□ -0.87
VPS45-213ENST00000618148 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
VPS45-213ENST00000618148 FAM196AQ6ZSG2 479 aa9.62□□□□□ -0.87
VPS45-213ENST00000618148 TTC5Q8N0Z6 440 aa9.62□□□□□ -0.87
VPS45-213ENST00000618148 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
VPS45-213ENST00000618148 FMNL2Q96PY5 1086 aa9.62□□□□□ -0.87
VPS45-213ENST00000618148 CHMP4AQ9BY43 222 aa9.62□□□□□ -0.87
VPS45-213ENST00000618148 ASAP1Q9ULH1 1129 aa9.62□□□□□ -0.87
VPS45-213ENST00000618148 COLQQ9Y215 455 aaPredicted RBP9.62□□□□□ -0.87
VPS45-213ENST00000618148 BTAF1O14981 1849 aa9.61□□□□□ -0.87
VPS45-213ENST00000618148 IER5LQ5T953 404 aa9.61□□□□□ -0.87
VPS45-213ENST00000618148 CACNA1FO60840 1977 aa9.61□□□□□ -0.87
VPS45-213ENST00000618148 ELL2O00472 640 aaPredicted RBP9.61□□□□□ -0.87
VPS45-213ENST00000618148 KCNQ2O43526 872 aa9.61□□□□□ -0.87
VPS45-213ENST00000618148 SNRPA1P09661 255 aaKnown RBP9.61□□□□□ -0.87
VPS45-213ENST00000618148 RRP1P56182 461 aaKnown RBP9.61□□□□□ -0.87
VPS45-213ENST00000618148 SMARCC1Q92922 1105 aaPredicted RBP9.61□□□□□ -0.87
VPS45-213ENST00000618148 SUPT16HQ9Y5B9 1047 aaKnown RBP9.61□□□□□ -0.87
VPS45-213ENST00000618148 KIF16BQ96L93 1317 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 TTLL13PA6NNM8 815 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 BCAR3O75815 825 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 CCDC30Q5VVM6 783 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
VPS45-213ENST00000618148 ACSBG1Q96GR2 724 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
VPS45-213ENST00000618148 TJP1Q07157 1748 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 EP400Q96L91 3159 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 ERBB4Q15303 1308 aa9.6□□□□□ -0.87
VPS45-213ENST00000618148 PALLDQ8WX93 1383 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 FAM182BQ5T319 152 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 PTF1AQ7RTS3 328 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 SYTL4Q96C24 671 aaPredicted RBP9.59□□□□□ -0.87
VPS45-213ENST00000618148 SLC4A9Q96Q91 983 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 SMC4Q9NTJ3 1288 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 RREB1Q92766 1687 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 LY75O60449 1722 aa9.59□□□□□ -0.87
VPS45-213ENST00000618148 PRAMEF22A3QJZ6 481 aa9.58□□□□□ -0.88
VPS45-213ENST00000618148 LRP10Q7Z4F1 713 aa9.58□□□□□ -0.88
VPS45-213ENST00000618148 PROM2Q8N271 834 aa9.58□□□□□ -0.88
VPS45-213ENST00000618148 ARHGAP45Q92619 1136 aa9.58□□□□□ -0.88
VPS45-213ENST00000618148 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
VPS45-213ENST00000618148 KAT6BQ8WYB5 2073 aa9.58□□□□□ -0.88
VPS45-213ENST00000618148 PTCD1O75127 700 aaKnown RBP9.58□□□□□ -0.88
VPS45-213ENST00000618148 PDIA6Q15084 440 aa9.58□□□□□ -0.88
VPS45-213ENST00000618148 BCL2L13Q9BXK5 485 aa9.58□□□□□ -0.88
VPS45-213ENST00000618148 RGPD3A6NKT7 1758 aaPredicted RBP9.57□□□□□ -0.88
VPS45-213ENST00000618148 RGPD4Q7Z3J3 1758 aa9.57□□□□□ -0.88
VPS45-213ENST00000618148 COL5A3P25940 1745 aaPredicted RBP9.57□□□□□ -0.88
VPS45-213ENST00000618148 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
VPS45-213ENST00000618148 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
VPS45-213ENST00000618148 SIK1P57059 783 aa9.57□□□□□ -0.88
VPS45-213ENST00000618148 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
VPS45-213ENST00000618148 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.57□□□□□ -0.88
VPS45-213ENST00000618148 STK31Q9BXU1 1019 aa9.57□□□□□ -0.88
VPS45-213ENST00000618148 DDX21Q9NR30 783 aaKnown RBP eCLIP9.57□□□□□ -0.88
VPS45-213ENST00000618148 DBF4Q9UBU7 674 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms