RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 XAGE3Q8WTP9 111 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 BABAM1Q9NWV8 329 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 EFCAB6Q5THR3 1501 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 GOLGA6L6A8MZA4 724 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 CDC42BPAQ5VT25 1732 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 STK3Q13188 491 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 R3HCC1Q9Y3T6 440 aaKnown RBP6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 PLXNC1O60486 1568 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 C19orf44Q9H6X5 657 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 IGSF1Q8N6C5 1336 aa6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 KRT32Q14532 448 aa6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 SH2B1Q9NRF2 756 aaPredicted RBP6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 SGSM2O43147 1006 aa6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 STX6O43752 255 aa6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 ANKRD1Q15327 319 aa6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 CADPS2Q86UW7 1296 aa6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 GAS2L3Q86XJ1 694 aa6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 INTS4Q96HW7 963 aaKnown RBP6.71□□□□□ -1.33
SYNCRIP-204ENST00000616122 NFATC2IPQ8NCF5 419 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 FMNL2Q96PY5 1086 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 TSPY26PQ9H489 355 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 MSH6P52701 1360 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 PDIA4P13667 645 aaKnown RBP6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 PKP1Q13835 747 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 MYD88Q99836 296 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZBTB3Q9H5J0 574 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 KCNQ3O43525 872 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 CPA1P15085 419 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 DDX11Q96FC9 970 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 TFIP11Q9UBB9 837 aaKnown RBP6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 PALD1Q9ULE6 856 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 ADCY10Q96PN6 1610 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 EIF4A1P60842 406 aaKnown RBP6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 EVI5LQ96CN4 794 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 SCAND2PQ9GZW5 306 aaPredicted RBP6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 OSBPL3Q9H4L5 887 aa6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 RBM27Q9P2N5 1060 aaKnown RBP6.71□□□□□ -1.34
SYNCRIP-204ENST00000616122 MAP3K5Q99683 1374 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 SNRPA1P09661 255 aaKnown RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 SYT1P21579 422 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 PRIM1P49642 420 aaKnown RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 CHAMP1Q96JM3 812 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 HCLS1P14317 486 aaPredicted RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 FOSBP53539 338 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 CEBPZQ03701 1054 aaKnown RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 CABLES1Q8TDN4 633 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 ADGBQ8N7X0 1667 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 DTNBO60941 627 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 PIP4K2AP48426 406 aaPredicted RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 FKBP4Q02790 459 aaKnown RBP eCLIP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 TRIM5Q9C035 493 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 USP25Q9UHP3 1055 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 ABCC3O15438 1527 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 CCDC192P0DO97 292 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 CCDC57Q2TAC2 916 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 SASS6Q6UVJ0 657 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 SYNMO15061 1565 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 IQGAP3Q86VI3 1631 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 KINO60870 393 aaKnown RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 SYNE3Q6ZMZ3 975 aa6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 RBM8AQ9Y5S9 174 aaKnown RBP6.7□□□□□ -1.34
SYNCRIP-204ENST00000616122 LRRIQ1Q96JM4 1722 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 UNC5CLQ8IV45 518 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 NECAB1Q8N987 351 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 CCDC34Q96HJ3 373 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 SNRKQ9NRH2 765 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 KLHDC4Q8TBB5 520 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 BRF1Q92994 677 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 CCDC39Q9UFE4 941 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 GIGYF1O75420 1035 aaPredicted RBP6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 RRAGDQ9NQL2 400 aaPredicted RBP6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 EAF2Q96CJ1 260 aaPredicted RBP6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 NPHP3Q7Z494 1330 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 FAM177BA6PVY3 158 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 UNC13BO14795 1591 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 TTC41PQ6P2S7 1318 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 RAD50Q92878 1312 aa6.69□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZSCAN23Q3MJ62 389 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 TRPM1Q7Z4N2 1603 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 BRD1O95696 1058 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 AK2P54819 239 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 ZNF790Q6PG37 636 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 RASEFQ8IZ41 740 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 FAM173BQ6P4H8 233 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 KIF24Q5T7B8 1368 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 FAM135BQ49AJ0 1406 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 FSD2A1L4K1 749 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 RNMTO43148 476 aaKnown RBP6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 ATP2B1P20020 1258 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 ME1P48163 572 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 CCDC158Q5M9N0 1113 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 NUP62CLQ9H1M0 184 aa6.68□□□□□ -1.34
SYNCRIP-204ENST00000616122 USP16Q9Y5T5 823 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms