RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 RABEP1Q15276 862 aa13.31□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 PXDNQ92626 1479 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 PTMSP20962 102 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 MTX1Q13505 466 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 SOX12O15370 315 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 USP42Q9H9J4 1324 aaKnown RBP13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 RNMTO43148 476 aaKnown RBP13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 SDSP20132 328 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 CPDO75976 1380 aa13.3□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 PDE1AP54750 535 aa13.29□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 CASC1Q6TDU7 716 aa13.29□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 SSFA2P28290 1259 aa13.29□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 UTYO14607 1347 aa13.29□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 NASPP49321 788 aaPredicted RBP13.29□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 NUTM2GQ5VZR2 741 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 CAVIN1Q6NZI2 390 aaKnown RBP13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 FKBP5Q13451 457 aaPredicted RBP13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 MCTP1Q6DN14 999 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 KRT28Q7Z3Y7 464 aa13.28□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 F6X3S4 739 aa13.27□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 ORAI2Q96SN7 254 aa13.27□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 ALDH1L1O75891 902 aa13.27□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 REC8O95072 547 aa13.27□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.28
SENP3-EIF4A1-201ENST00000614237 COL15A1P39059 1388 aa13.27□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 C5P01031 1676 aa13.27□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ERBB3P21860 1342 aa13.27□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 HDAC5Q9UQL6 1122 aa13.27□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 GLI3P10071 1580 aa13.27□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 TSC1Q92574 1164 aa13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 LGR6Q9HBX8 967 aa13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ADCY9O60503 1353 aa13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 DDX11L8A8MPP1 907 aa13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 GBP4Q96PP9 640 aa13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 TNS3Q68CZ2 1445 aa13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 PAPPAQ13219 1627 aa13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ANAPC15P60006 121 aa13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 FSD2A1L4K1 749 aa13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ERC2O15083 957 aa13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 UBR2Q8IWV8 1755 aa13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 OTUD7AQ8TE49 926 aaPredicted RBP13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 HSP90AB4PQ58FF6 505 aa13.24□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 DNAAF4Q8WXU2 420 aa13.24□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 MX1P20591 662 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 TEFQ10587 303 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 KDM6AO15550 1401 aaPredicted RBP13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 PHAXQ9H814 394 aaKnown RBP13.22□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 SMARCA5O60264 1052 aaPredicted RBP13.22□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 DTNBO60941 627 aa13.22□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 MCM2P49736 904 aa13.22□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 TMEM94Q12767 1356 aa13.21□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 IGSF3O75054 1194 aa13.21□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 NPHP3Q7Z494 1330 aa13.21□□□□□ -0.29
SENP3-EIF4A1-201ENST00000614237 SKOR2Q2VWA4 1001 aaPredicted RBP13.21□□□□□ -0.3
SENP3-EIF4A1-201ENST00000614237 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.3
SENP3-EIF4A1-201ENST00000614237 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
SENP3-EIF4A1-201ENST00000614237 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
SENP3-EIF4A1-201ENST00000614237 KIF1BPQ96EK5 621 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms