RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 MCM4P33991 863 aa16.95■□□□□ 0.3
NOP56-219ENST00000612233 ALDH1L1O75891 902 aa16.95■□□□□ 0.3
NOP56-219ENST00000612233 PDE1AP54750 535 aa16.95■□□□□ 0.3
NOP56-219ENST00000612233 ANAPC15P60006 121 aa16.95■□□□□ 0.3
NOP56-219ENST00000612233 ESCO1Q5FWF5 840 aa16.95■□□□□ 0.3
NOP56-219ENST00000612233 C5P01031 1676 aa16.94■□□□□ 0.3
NOP56-219ENST00000612233 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
NOP56-219ENST00000612233 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
NOP56-219ENST00000612233 LRRCC1Q9C099 1032 aa16.94■□□□□ 0.3
NOP56-219ENST00000612233 UTYO14607 1347 aa16.94■□□□□ 0.3
NOP56-219ENST00000612233 SDSP20132 328 aa16.94■□□□□ 0.3
NOP56-219ENST00000612233 HSP90AB4PQ58FF6 505 aa16.94■□□□□ 0.3
NOP56-219ENST00000612233 RNMTO43148 476 aaKnown RBP16.93■□□□□ 0.3
NOP56-219ENST00000612233 CHRM1P11229 460 aaPredicted RBP16.93■□□□□ 0.3
NOP56-219ENST00000612233 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
NOP56-219ENST00000612233 UBR2Q8IWV8 1755 aa16.93■□□□□ 0.3
NOP56-219ENST00000612233 GLI3P10071 1580 aa16.93■□□□□ 0.3
NOP56-219ENST00000612233 TNS3Q68CZ2 1445 aa16.93■□□□□ 0.3
NOP56-219ENST00000612233 FKBP5Q13451 457 aaPredicted RBP16.93■□□□□ 0.3
NOP56-219ENST00000612233 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
NOP56-219ENST00000612233 ERC2O15083 957 aa16.92■□□□□ 0.3
NOP56-219ENST00000612233 MCM2P49736 904 aa16.92■□□□□ 0.3
NOP56-219ENST00000612233 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
NOP56-219ENST00000612233 CWC22Q9HCG8 908 aaKnown RBP16.92■□□□□ 0.3
NOP56-219ENST00000612233 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
NOP56-219ENST00000612233 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
NOP56-219ENST00000612233 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
NOP56-219ENST00000612233 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
NOP56-219ENST00000612233 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
NOP56-219ENST00000612233 ERBB3P21860 1342 aa16.9■□□□□ 0.3
NOP56-219ENST00000612233 BEND3Q5T5X7 828 aa16.9■□□□□ 0.3
NOP56-219ENST00000612233 SOX12O15370 315 aa16.89■□□□□ 0.3
NOP56-219ENST00000612233 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.3
NOP56-219ENST00000612233 KRT28Q7Z3Y7 464 aa16.89■□□□□ 0.3
NOP56-219ENST00000612233 ANKRD24Q8TF21 1146 aa16.89■□□□□ 0.3
NOP56-219ENST00000612233 GBP4Q96PP9 640 aa16.89■□□□□ 0.3
NOP56-219ENST00000612233 ADCY9O60503 1353 aa16.89■□□□□ 0.29
NOP56-219ENST00000612233 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.29
NOP56-219ENST00000612233 SLKQ9H2G2 1235 aaPredicted RBP16.89■□□□□ 0.29
NOP56-219ENST00000612233 PLCB2Q00722 1185 aa16.89■□□□□ 0.29
NOP56-219ENST00000612233 C1orf141Q5JVX7 400 aa16.89■□□□□ 0.29
NOP56-219ENST00000612233 DNAAF4Q8WXU2 420 aa16.89■□□□□ 0.29
NOP56-219ENST00000612233 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
NOP56-219ENST00000612233 MX1P20591 662 aa16.88■□□□□ 0.29
NOP56-219ENST00000612233 TEFQ10587 303 aa16.88■□□□□ 0.29
NOP56-219ENST00000612233 HYPKQ9NX55 129 aa16.88■□□□□ 0.29
NOP56-219ENST00000612233 FSD2A1L4K1 749 aa16.88■□□□□ 0.29
NOP56-219ENST00000612233 F6X3S4 739 aa16.88■□□□□ 0.29
NOP56-219ENST00000612233 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
NOP56-219ENST00000612233 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
NOP56-219ENST00000612233 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
NOP56-219ENST00000612233 GIGYF1O75420 1035 aaPredicted RBP16.86■□□□□ 0.29
NOP56-219ENST00000612233 NUCB2P80303 420 aa16.86■□□□□ 0.29
NOP56-219ENST00000612233 KCNG1Q9UIX4 513 aa16.86■□□□□ 0.29
NOP56-219ENST00000612233 ST18O60284 1047 aa16.86■□□□□ 0.29
NOP56-219ENST00000612233 CYP2E1P05181 493 aaPredicted RBP16.86■□□□□ 0.29
NOP56-219ENST00000612233 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
NOP56-219ENST00000612233 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
NOP56-219ENST00000612233 C16orf71Q8IYS4 520 aaPredicted RBP16.86■□□□□ 0.29
NOP56-219ENST00000612233 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
NOP56-219ENST00000612233 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
NOP56-219ENST00000612233 NUTM2GQ5VZR2 741 aa16.85■□□□□ 0.29
NOP56-219ENST00000612233 PROSER2Q86WR7 435 aaPredicted RBP16.85■□□□□ 0.29
NOP56-219ENST00000612233 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
NOP56-219ENST00000612233 ARFGEF2Q9Y6D5 1785 aa16.85■□□□□ 0.29
NOP56-219ENST00000612233 ERC1Q8IUD2 1116 aa16.85■□□□□ 0.29
NOP56-219ENST00000612233 ORAI2Q96SN7 254 aa16.85■□□□□ 0.29
NOP56-219ENST00000612233 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
NOP56-219ENST00000612233 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
NOP56-219ENST00000612233 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
NOP56-219ENST00000612233 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
NOP56-219ENST00000612233 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
NOP56-219ENST00000612233 PNMA6EA0A0J9YXQ4 647 aa16.84■□□□□ 0.29
NOP56-219ENST00000612233 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
NOP56-219ENST00000612233 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
NOP56-219ENST00000612233 MCCP23508 829 aa16.83■□□□□ 0.29
NOP56-219ENST00000612233 OTUD7AQ8TE49 926 aaPredicted RBP16.83■□□□□ 0.29
NOP56-219ENST00000612233 TMEM94Q12767 1356 aa16.83■□□□□ 0.29
NOP56-219ENST00000612233 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
NOP56-219ENST00000612233 SHANK3Q9BYB0 1731 aa16.83■□□□□ 0.28
NOP56-219ENST00000612233 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
NOP56-219ENST00000612233 SPG7Q9UQ90 795 aa16.82■□□□□ 0.28
NOP56-219ENST00000612233 DDX58O95786 925 aaKnown RBP16.82■□□□□ 0.28
NOP56-219ENST00000612233 CHMLP26374 656 aa16.82■□□□□ 0.28
NOP56-219ENST00000612233 INTS4Q96HW7 963 aaKnown RBP16.82■□□□□ 0.28
NOP56-219ENST00000612233 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
NOP56-219ENST00000612233 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
NOP56-219ENST00000612233 LTV1Q96GA3 475 aaPredicted RBP16.81■□□□□ 0.28
NOP56-219ENST00000612233 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
NOP56-219ENST00000612233 SMARCA5O60264 1052 aaPredicted RBP16.81■□□□□ 0.28
NOP56-219ENST00000612233 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
NOP56-219ENST00000612233 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
NOP56-219ENST00000612233 RFX7Q2KHR2 1363 aa16.81■□□□□ 0.28
NOP56-219ENST00000612233 MEGF6O75095 1541 aa16.8■□□□□ 0.28
NOP56-219ENST00000612233 CUL4AQ13619 759 aa16.8■□□□□ 0.28
NOP56-219ENST00000612233 PHAXQ9H814 394 aaKnown RBP16.8■□□□□ 0.28
NOP56-219ENST00000612233 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
NOP56-219ENST00000612233 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.8■□□□□ 0.28
NOP56-219ENST00000612233 AFDNP55196 1824 aaKnown RBP16.8■□□□□ 0.28
NOP56-219ENST00000612233 SPATA31A3Q5VYP0 1347 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms