RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 NBPF14Q5TI25 921 aa15.52■□□□□ 0.08
CLK4-215ENST00000611733 NBPF10Q6P3W6 841 aaKnown RBP15.52■□□□□ 0.08
CLK4-215ENST00000611733 NBPF15Q8N660 670 aa15.52■□□□□ 0.08
CLK4-215ENST00000611733 CHPF2Q9P2E5 772 aa15.52■□□□□ 0.08
CLK4-215ENST00000611733 SF3B2Q13435 895 aaKnown RBP15.52■□□□□ 0.07
CLK4-215ENST00000611733 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.07
CLK4-215ENST00000611733 LY75O60449 1722 aa15.52■□□□□ 0.07
CLK4-215ENST00000611733 TJP1Q07157 1748 aa15.51■□□□□ 0.07
CLK4-215ENST00000611733 INTS5Q6P9B9 1019 aaKnown RBP15.51■□□□□ 0.07
CLK4-215ENST00000611733 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
CLK4-215ENST00000611733 CT47B1P0C2W7 299 aaPredicted RBP15.51■□□□□ 0.07
CLK4-215ENST00000611733 MYL6BP14649 208 aa15.51■□□□□ 0.07
CLK4-215ENST00000611733 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
CLK4-215ENST00000611733 CCDC30Q5VVM6 783 aa15.51■□□□□ 0.07
CLK4-215ENST00000611733 G2E3Q7L622 706 aa15.51■□□□□ 0.07
CLK4-215ENST00000611733 STARD3NLO95772 234 aa15.5■□□□□ 0.07
CLK4-215ENST00000611733 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
CLK4-215ENST00000611733 CANXP27824 592 aaKnown RBP15.5■□□□□ 0.07
CLK4-215ENST00000611733 MRPL50Q8N5N7 158 aaKnown RBP15.5■□□□□ 0.07
CLK4-215ENST00000611733 ZBTB1Q9Y2K1 713 aa15.5■□□□□ 0.07
CLK4-215ENST00000611733 BAG6P46379 1132 aa15.49■□□□□ 0.07
CLK4-215ENST00000611733 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
CLK4-215ENST00000611733 PHAXQ9H814 394 aaKnown RBP15.49■□□□□ 0.07
CLK4-215ENST00000611733 SOS1Q07889 1333 aaPredicted RBP15.49■□□□□ 0.07
CLK4-215ENST00000611733 SLC27A3Q5K4L6 730 aa15.49■□□□□ 0.07
CLK4-215ENST00000611733 CCDC125Q86Z20 511 aa15.49■□□□□ 0.07
CLK4-215ENST00000611733 SMC4Q9NTJ3 1288 aa15.49■□□□□ 0.07
CLK4-215ENST00000611733 LRP10Q7Z4F1 713 aa15.48■□□□□ 0.07
CLK4-215ENST00000611733 DDX21Q9NR30 783 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLK4-215ENST00000611733 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
CLK4-215ENST00000611733 DBF4Q9UBU7 674 aaPredicted RBP15.48■□□□□ 0.07
CLK4-215ENST00000611733 CENPBP07199 599 aaPredicted RBP15.47■□□□□ 0.07
CLK4-215ENST00000611733 ALDH1L2Q3SY69 923 aa15.47■□□□□ 0.07
CLK4-215ENST00000611733 PLIN1O60240 522 aa15.46■□□□□ 0.07
CLK4-215ENST00000611733 ZNF428Q96B54 188 aa15.46■□□□□ 0.07
CLK4-215ENST00000611733 STK31Q9BXU1 1019 aa15.46■□□□□ 0.07
CLK4-215ENST00000611733 ZNF330Q9Y3S2 320 aaPredicted RBP15.46■□□□□ 0.07
CLK4-215ENST00000611733 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
CLK4-215ENST00000611733 ZNF827Q17R98 1081 aa15.46■□□□□ 0.07
CLK4-215ENST00000611733 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
CLK4-215ENST00000611733 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
CLK4-215ENST00000611733 MYH14Q7Z406 1995 aaKnown RBP15.46■□□□□ 0.06
CLK4-215ENST00000611733 ZNF831Q5JPB2 1677 aa15.45■□□□□ 0.06
CLK4-215ENST00000611733 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
CLK4-215ENST00000611733 LAMB4A4D0S4 1761 aa15.45■□□□□ 0.06
CLK4-215ENST00000611733 COL5A3P25940 1745 aaPredicted RBP15.45■□□□□ 0.06
CLK4-215ENST00000611733 RC3H1Q5TC82 1133 aaKnown RBP15.45■□□□□ 0.06
CLK4-215ENST00000611733 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
CLK4-215ENST00000611733 XAGE3Q8WTP9 111 aa15.45■□□□□ 0.06
CLK4-215ENST00000611733 FRAT1Q92837 279 aaPredicted RBP15.45■□□□□ 0.06
CLK4-215ENST00000611733 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
CLK4-215ENST00000611733 GNPATO15228 680 aa15.44■□□□□ 0.06
CLK4-215ENST00000611733 TTLL7Q6ZT98 887 aa15.44■□□□□ 0.06
CLK4-215ENST00000611733 ANO8Q9HCE9 1232 aaPredicted RBP15.44■□□□□ 0.06
CLK4-215ENST00000611733 CICQ96RK0 1608 aaPredicted RBP15.44■□□□□ 0.06
CLK4-215ENST00000611733 TAF1LQ8IZX4 1826 aa15.44■□□□□ 0.06
CLK4-215ENST00000611733 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
CLK4-215ENST00000611733 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
CLK4-215ENST00000611733 HYPKQ9NX55 129 aa15.43■□□□□ 0.06
CLK4-215ENST00000611733 FLIIQ13045 1269 aa15.43■□□□□ 0.06
CLK4-215ENST00000611733 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
CLK4-215ENST00000611733 C4BP0C0L5 1744 aa15.42■□□□□ 0.06
CLK4-215ENST00000611733 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
CLK4-215ENST00000611733 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
CLK4-215ENST00000611733 AK7Q96M32 723 aa15.42■□□□□ 0.06
CLK4-215ENST00000611733 ARXQ96QS3 562 aa15.42■□□□□ 0.06
CLK4-215ENST00000611733 PHF14O94880 888 aa15.42■□□□□ 0.06
CLK4-215ENST00000611733 IL6STP40189 918 aaPredicted RBP15.42■□□□□ 0.06
CLK4-215ENST00000611733 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
CLK4-215ENST00000611733 F6X3S4 739 aa15.41■□□□□ 0.06
CLK4-215ENST00000611733 CHMP4AQ9BY43 222 aa15.41■□□□□ 0.06
CLK4-215ENST00000611733 RGPD3A6NKT7 1758 aaPredicted RBP15.41■□□□□ 0.06
CLK4-215ENST00000611733 RGPD4Q7Z3J3 1758 aa15.41■□□□□ 0.06
CLK4-215ENST00000611733 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
CLK4-215ENST00000611733 FKBP5Q13451 457 aaPredicted RBP15.4■□□□□ 0.06
CLK4-215ENST00000611733 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
CLK4-215ENST00000611733 RREB1Q92766 1687 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 C20orf194Q5TEA3 1177 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 CLUAP1Q96AJ1 413 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 TFCP2L1Q9NZI6 479 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.39■□□□□ 0.05
CLK4-215ENST00000611733 PI4KAP2A4QPH2 592 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 TRIM27P14373 513 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 PI4KAP1Q8N8J0 262 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 ZBTB3Q9H5J0 574 aa15.39■□□□□ 0.05
CLK4-215ENST00000611733 COL15A1P39059 1388 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
CLK4-215ENST00000611733 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 ANKRD13DQ6ZTN6 518 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 DZIP3Q86Y13 1208 aaKnown RBP15.38■□□□□ 0.05
CLK4-215ENST00000611733 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
CLK4-215ENST00000611733 ADCY9O60503 1353 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 RLBP1P12271 317 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 HLFQ16534 295 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 TRAPPC3LQ5T215 181 aa15.38■□□□□ 0.05
CLK4-215ENST00000611733 NUP188Q5SRE5 1749 aa15.37■□□□□ 0.05
CLK4-215ENST00000611733 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
CLK4-215ENST00000611733 ZKSCAN2Q63HK3 967 aa15.37■□□□□ 0.05
CLK4-215ENST00000611733 ATF7IPQ6VMQ6 1270 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms