RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TEX13AQ9BXU3 409 aaPredicted RBP8.69□□□□□ -1.02
CSDE1-218ENST00000610726 ZBTB40Q9NUA8 1239 aa8.69□□□□□ -1.02
CSDE1-218ENST00000610726 ERVK-7P63135 1459 aa8.69□□□□□ -1.02
CSDE1-218ENST00000610726 HSP90AB3PQ58FF7 597 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 NACAP1Q9BZK3 213 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 KDM5DQ9BY66 1539 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 PDCP20941 246 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 PDRG1Q9NUG6 133 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 GRM8O00222 908 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 CCDC73Q6ZRK6 1079 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 PA2G4Q9UQ80 394 aaKnown RBP8.68□□□□□ -1.02
CSDE1-218ENST00000610726 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 CHL1O00533 1208 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 TDO2P48775 406 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 DCAF5Q96JK2 942 aa8.68□□□□□ -1.02
CSDE1-218ENST00000610726 LARP6Q9BRS8 491 aaKnown RBP8.68□□□□□ -1.02
CSDE1-218ENST00000610726 ROBO2Q9HCK4 1378 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 LMBR1LQ6UX01 489 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 ANKRD18BA2A2Z9 1011 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 TPD52L1Q16890 204 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-218ENST00000610726 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
CSDE1-218ENST00000610726 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 CFAP74Q9C0B2 1584 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 TTC22Q5TAA0 569 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 LINS1Q8NG48 757 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 SDF4Q9BRK5 362 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 EFCAB6Q5THR3 1501 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 HECW2Q9P2P5 1572 aa8.67□□□□□ -1.02
CSDE1-218ENST00000610726 SDSP20132 328 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 ATP8B2P98198 1209 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 GLIPR1L2Q4G1C9 344 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 NUP133Q8WUM0 1156 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 LMTK3Q96Q04 1460 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 GOLIM4O00461 696 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 ATP6V1AP38606 617 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 ANKRD1Q15327 319 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 CEP85Q6P2H3 762 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 CWC22Q9HCG8 908 aaKnown RBP8.66□□□□□ -1.02
CSDE1-218ENST00000610726 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 PDE1AP54750 535 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 DDX11Q96FC9 970 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 CTNNA3Q9UI47 895 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-218ENST00000610726 ALDH1L1O75891 902 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 ATP2B2Q01814 1243 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 ZNF790Q6PG37 636 aa8.66□□□□□ -1.02
CSDE1-218ENST00000610726 IKQ13123 557 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-218ENST00000610726 SASS6Q6UVJ0 657 aa8.65□□□□□ -1.02
CSDE1-218ENST00000610726 FERMT3Q86UX7 667 aa8.65□□□□□ -1.02
CSDE1-218ENST00000610726 KDM5CP41229 1560 aa8.65□□□□□ -1.02
CSDE1-218ENST00000610726 SLC3A2P08195 630 aaKnown RBP8.65□□□□□ -1.02
CSDE1-218ENST00000610726 CTDP1Q9Y5B0 961 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-218ENST00000610726 XBP1P17861 261 aa8.65□□□□□ -1.03
CSDE1-218ENST00000610726 KRT32Q14532 448 aa8.65□□□□□ -1.03
CSDE1-218ENST00000610726 DDX46Q7L014 1031 aaKnown RBP8.65□□□□□ -1.03
CSDE1-218ENST00000610726 CCDC83Q8IWF9 413 aa8.65□□□□□ -1.03
CSDE1-218ENST00000610726 ANKIB1Q9P2G1 1089 aa8.65□□□□□ -1.03
CSDE1-218ENST00000610726 ABCC3O15438 1527 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 MYOM2P54296 1465 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 PLEKHG1Q9ULL1 1385 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 WDR33Q9C0J8 1336 aaKnown RBP8.64□□□□□ -1.03
CSDE1-218ENST00000610726 RBM5P52756 815 aaKnown RBP eCLIP8.64□□□□□ -1.03
CSDE1-218ENST00000610726 CAVIN4Q5BKX8 364 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 DCTPP1Q9H773 170 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 DDX21Q9NR30 783 aaKnown RBP eCLIP8.64□□□□□ -1.03
CSDE1-218ENST00000610726 MCM4P33991 863 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 IMMTQ16891 758 aaKnown RBP8.64□□□□□ -1.03
CSDE1-218ENST00000610726 SMC5Q8IY18 1101 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 EVI5LQ96CN4 794 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 MINDY4BA8MYZ0 360 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 IL17REQ8NFR9 667 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 ARID3AQ99856 593 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 TMEM94Q12767 1356 aa8.64□□□□□ -1.03
CSDE1-218ENST00000610726 MBD3O95983 291 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
CSDE1-218ENST00000610726 AK7Q96M32 723 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 U3KPZ7 1027 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-218ENST00000610726 CCDC69A6NI79 296 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 STK38Q15208 465 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 UBAC1Q9BSL1 405 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 BRMS1Q9HCU9 246 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 KCNQ3O43525 872 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 SLC5A1P13866 664 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 C8orf34Q49A92 452 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 ZNF219Q9P2Y4 722 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-218ENST00000610726 IQSEC3Q9UPP2 1182 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-218ENST00000610726 BLMP54132 1417 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-218ENST00000610726 PIBF1Q8WXW3 757 aa8.63□□□□□ -1.03
CSDE1-218ENST00000610726 ZNF496Q96IT1 587 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-218ENST00000610726 ZSCAN31Q96LW9 406 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-218ENST00000610726 ZMYM4Q5VZL5 1548 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 PCDH11XQ9BZA7 1347 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 PCDH11YQ9BZA8 1340 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 ADCY10Q96PN6 1610 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 A1BGP04217 495 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms