RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 COL15A1P39059 1388 aa18.93■□□□□ 0.62
PRDM16-210ENST00000607632 LAMB4A4D0S4 1761 aa18.93■□□□□ 0.62
PRDM16-210ENST00000607632 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
PRDM16-210ENST00000607632 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
PRDM16-210ENST00000607632 RUNDC1Q96C34 613 aa18.93■□□□□ 0.62
PRDM16-210ENST00000607632 CD2APQ9Y5K6 639 aa18.93■□□□□ 0.62
PRDM16-210ENST00000607632 EIF5P55010 431 aaKnown RBP18.92■□□□□ 0.62
PRDM16-210ENST00000607632 RIPK4P57078 832 aa18.91■□□□□ 0.62
PRDM16-210ENST00000607632 SCN7AQ01118 1682 aa18.91■□□□□ 0.62
PRDM16-210ENST00000607632 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
PRDM16-210ENST00000607632 MMP10P09238 476 aa18.9■□□□□ 0.62
PRDM16-210ENST00000607632 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
PRDM16-210ENST00000607632 NLGN2Q8NFZ4 835 aa18.9■□□□□ 0.62
PRDM16-210ENST00000607632 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
PRDM16-210ENST00000607632 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
PRDM16-210ENST00000607632 NARFQ9UHQ1 456 aa18.9■□□□□ 0.62
PRDM16-210ENST00000607632 SNRPA1P09661 255 aaKnown RBP18.89■□□□□ 0.61
PRDM16-210ENST00000607632 IL6STP40189 918 aaPredicted RBP18.89■□□□□ 0.61
PRDM16-210ENST00000607632 CCDC146Q8IYE0 955 aa18.89■□□□□ 0.61
PRDM16-210ENST00000607632 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.61
PRDM16-210ENST00000607632 USP16Q9Y5T5 823 aa18.89■□□□□ 0.61
PRDM16-210ENST00000607632 C10orf71Q711Q0 1435 aa18.89■□□□□ 0.61
PRDM16-210ENST00000607632 NRXN2Q9P2S2 1712 aa18.88■□□□□ 0.61
PRDM16-210ENST00000607632 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
PRDM16-210ENST00000607632 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
PRDM16-210ENST00000607632 PRAMEF22A3QJZ6 481 aa18.87■□□□□ 0.61
PRDM16-210ENST00000607632 TM4SF1P30408 202 aa18.87■□□□□ 0.61
PRDM16-210ENST00000607632 EIF4A1P60842 406 aaKnown RBP18.87■□□□□ 0.61
PRDM16-210ENST00000607632 FKBP8Q14318 412 aa18.87■□□□□ 0.61
PRDM16-210ENST00000607632 BCL2L12Q9HB09 334 aa18.87■□□□□ 0.61
PRDM16-210ENST00000607632 TRIM35Q9UPQ4 493 aa18.87■□□□□ 0.61
PRDM16-210ENST00000607632 A1BGP04217 495 aa18.86■□□□□ 0.61
PRDM16-210ENST00000607632 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
PRDM16-210ENST00000607632 USPL1Q5W0Q7 1092 aa18.86■□□□□ 0.61
PRDM16-210ENST00000607632 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
PRDM16-210ENST00000607632 A0A087WZG4 1122 aa18.85■□□□□ 0.61
PRDM16-210ENST00000607632 ANP32CO43423 234 aa18.85■□□□□ 0.61
PRDM16-210ENST00000607632 ZPR1O75312 459 aa18.85■□□□□ 0.61
PRDM16-210ENST00000607632 GIGYF1O75420 1035 aaPredicted RBP18.85■□□□□ 0.61
PRDM16-210ENST00000607632 UTRNP46939 3433 aa18.84■□□□□ 0.61
PRDM16-210ENST00000607632 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
PRDM16-210ENST00000607632 YY1P25490 414 aa18.84■□□□□ 0.61
PRDM16-210ENST00000607632 DDR1Q08345 913 aa18.84■□□□□ 0.61
PRDM16-210ENST00000607632 KLHL34Q8N239 644 aa18.84■□□□□ 0.61
PRDM16-210ENST00000607632 RRP7AQ9Y3A4 280 aaKnown RBP18.84■□□□□ 0.61
PRDM16-210ENST00000607632 AFDNP55196 1824 aaKnown RBP18.84■□□□□ 0.61
PRDM16-210ENST00000607632 POLRMTO00411 1230 aaKnown RBP18.83■□□□□ 0.6
PRDM16-210ENST00000607632 PXDNLA1KZ92 1463 aa18.83■□□□□ 0.6
PRDM16-210ENST00000607632 BRCA1P38398 1863 aaKnown RBP18.82■□□□□ 0.6
PRDM16-210ENST00000607632 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
PRDM16-210ENST00000607632 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
PRDM16-210ENST00000607632 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
PRDM16-210ENST00000607632 PARP3Q9Y6F1 533 aa18.82■□□□□ 0.6
PRDM16-210ENST00000607632 CHD4Q14839 1912 aa18.81■□□□□ 0.6
PRDM16-210ENST00000607632 CHL1O00533 1208 aa18.81■□□□□ 0.6
PRDM16-210ENST00000607632 RGL2O15211 777 aa18.81■□□□□ 0.6
PRDM16-210ENST00000607632 NFIXQ14938 502 aa18.81■□□□□ 0.6
PRDM16-210ENST00000607632 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
PRDM16-210ENST00000607632 CAMTA2O94983 1202 aa18.8■□□□□ 0.6
PRDM16-210ENST00000607632 TGFB2P61812 414 aa18.8■□□□□ 0.6
PRDM16-210ENST00000607632 GOLGB1Q14789 3259 aaKnown RBP18.8■□□□□ 0.6
PRDM16-210ENST00000607632 N4BP2Q86UW6 1770 aaPredicted RBP18.79■□□□□ 0.6
PRDM16-210ENST00000607632 APAF1O14727 1248 aa18.79■□□□□ 0.6
PRDM16-210ENST00000607632 NEUROD2Q15784 382 aa18.79■□□□□ 0.6
PRDM16-210ENST00000607632 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
PRDM16-210ENST00000607632 YBX3P16989 372 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRDM16-210ENST00000607632 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
PRDM16-210ENST00000607632 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
PRDM16-210ENST00000607632 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
PRDM16-210ENST00000607632 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
PRDM16-210ENST00000607632 GPR162Q16538 588 aa18.77■□□□□ 0.6
PRDM16-210ENST00000607632 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
PRDM16-210ENST00000607632 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
PRDM16-210ENST00000607632 CLEC4GQ6UXB4 293 aa18.76■□□□□ 0.59
PRDM16-210ENST00000607632 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
PRDM16-210ENST00000607632 CCDC27Q2M243 656 aa18.75■□□□□ 0.59
PRDM16-210ENST00000607632 TBC1D9BQ66K14 1250 aa18.75■□□□□ 0.59
PRDM16-210ENST00000607632 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
PRDM16-210ENST00000607632 DLEC1Q9Y238 1755 aa18.75■□□□□ 0.59
PRDM16-210ENST00000607632 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
PRDM16-210ENST00000607632 SERPINB2P05120 415 aa18.74■□□□□ 0.59
PRDM16-210ENST00000607632 KCNA3P22001 575 aa18.74■□□□□ 0.59
PRDM16-210ENST00000607632 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
PRDM16-210ENST00000607632 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
PRDM16-210ENST00000607632 ANKRD31Q8N7Z5 1873 aa18.73■□□□□ 0.59
PRDM16-210ENST00000607632 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
PRDM16-210ENST00000607632 ARFGEF1Q9Y6D6 1849 aa18.73■□□□□ 0.59
PRDM16-210ENST00000607632 HOXB7P09629 217 aa18.72■□□□□ 0.59
PRDM16-210ENST00000607632 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
PRDM16-210ENST00000607632 PDIA6Q15084 440 aa18.72■□□□□ 0.59
PRDM16-210ENST00000607632 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
PRDM16-210ENST00000607632 NUP98P52948 1817 aa18.72■□□□□ 0.59
PRDM16-210ENST00000607632 DPEP1P16444 411 aa18.71■□□□□ 0.59
PRDM16-210ENST00000607632 A0A0G2JLW4 131 aa18.7■□□□□ 0.58
PRDM16-210ENST00000607632 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
PRDM16-210ENST00000607632 MBIPQ9NS73 344 aa18.7■□□□□ 0.58
PRDM16-210ENST00000607632 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
PRDM16-210ENST00000607632 ATP10DQ9P241 1426 aa18.69■□□□□ 0.58
PRDM16-210ENST00000607632 GNAI1P63096 354 aa18.69■□□□□ 0.58
PRDM16-210ENST00000607632 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms