RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 CACNA1FO60840 1977 aa29.48■■■□□ 2.31
IRF3-227ENST00000600911 SOS1Q07889 1333 aaPredicted RBP29.48■■■□□ 2.31
IRF3-227ENST00000600911 G2E3Q7L622 706 aa29.48■■■□□ 2.31
IRF3-227ENST00000600911 RNF123Q5XPI4 1314 aa29.48■■■□□ 2.31
IRF3-227ENST00000600911 ATP6V1AP38606 617 aa29.47■■■□□ 2.31
IRF3-227ENST00000600911 A1BGP04217 495 aa29.46■■■□□ 2.31
IRF3-227ENST00000600911 RREB1Q92766 1687 aa29.46■■■□□ 2.31
IRF3-227ENST00000600911 CCDC30Q5VVM6 783 aa29.45■■■□□ 2.31
IRF3-227ENST00000600911 ZNF428Q96B54 188 aa29.45■■■□□ 2.31
IRF3-227ENST00000600911 NBPF26B4DH59 902 aa29.45■■■□□ 2.3
IRF3-227ENST00000600911 NBPF14Q5TI25 921 aa29.45■■■□□ 2.3
IRF3-227ENST00000600911 NBPF10Q6P3W6 841 aaKnown RBP29.45■■■□□ 2.3
IRF3-227ENST00000600911 NBPF15Q8N660 670 aa29.45■■■□□ 2.3
IRF3-227ENST00000600911 SLC4A2P04920 1241 aa29.44■■■□□ 2.3
IRF3-227ENST00000600911 CYP19A1P11511 503 aaPredicted RBP29.44■■■□□ 2.3
IRF3-227ENST00000600911 PHAXQ9H814 394 aaKnown RBP29.44■■■□□ 2.3
IRF3-227ENST00000600911 LRRC4BQ9NT99 713 aa29.44■■■□□ 2.3
IRF3-227ENST00000600911 RRP1P56182 461 aaKnown RBP29.43■■■□□ 2.3
IRF3-227ENST00000600911 LRP10Q7Z4F1 713 aa29.43■■■□□ 2.3
IRF3-227ENST00000600911 PROM2Q8N271 834 aa29.43■■■□□ 2.3
IRF3-227ENST00000600911 LINC00116Q8NCU8 138 aa29.43■■■□□ 2.3
IRF3-227ENST00000600911 APBA3O96018 575 aa29.42■■■□□ 2.3
IRF3-227ENST00000600911 NOB1Q9ULX3 412 aaKnown RBP29.42■■■□□ 2.3
IRF3-227ENST00000600911 FRAT1Q92837 279 aaPredicted RBP29.41■■■□□ 2.3
IRF3-227ENST00000600911 CCNL1Q9UK58 526 aaPredicted RBP29.41■■■□□ 2.3
IRF3-227ENST00000600911 BRPF1P55201 1214 aaPredicted RBP29.4■■■□□ 2.3
IRF3-227ENST00000600911 MYL6BP14649 208 aa29.39■■■□□ 2.3
IRF3-227ENST00000600911 C20orf194Q5TEA3 1177 aa29.39■■■□□ 2.3
IRF3-227ENST00000600911 ZBTB1Q9Y2K1 713 aa29.39■■■□□ 2.3
IRF3-227ENST00000600911 RGPD3A6NKT7 1758 aaPredicted RBP29.39■■■□□ 2.3
IRF3-227ENST00000600911 RGPD4Q7Z3J3 1758 aa29.39■■■□□ 2.3
IRF3-227ENST00000600911 STK31Q9BXU1 1019 aa29.38■■■□□ 2.29
IRF3-227ENST00000600911 DDX21Q9NR30 783 aaKnown RBP eCLIP29.38■■■□□ 2.29
IRF3-227ENST00000600911 INTS5Q6P9B9 1019 aaKnown RBP29.38■■■□□ 2.29
IRF3-227ENST00000600911 DBF4Q9UBU7 674 aaPredicted RBP29.38■■■□□ 2.29
IRF3-227ENST00000600911 C4BP0C0L5 1744 aa29.37■■■□□ 2.29
IRF3-227ENST00000600911 IRX6P78412 446 aaPredicted RBP29.37■■■□□ 2.29
IRF3-227ENST00000600911 PLSCR1O15162 318 aa29.36■■■□□ 2.29
IRF3-227ENST00000600911 CRKLP46109 303 aaKnown RBP29.36■■■□□ 2.29
IRF3-227ENST00000600911 TEX13AQ9BXU3 409 aaPredicted RBP29.36■■■□□ 2.29
IRF3-227ENST00000600911 TXNRD1Q16881 649 aa29.35■■■□□ 2.29
IRF3-227ENST00000600911 SMIM5Q71RC9 77 aa29.35■■■□□ 2.29
IRF3-227ENST00000600911 STARD3NLO95772 234 aa29.34■■■□□ 2.29
IRF3-227ENST00000600911 CANXP27824 592 aaKnown RBP29.34■■■□□ 2.29
IRF3-227ENST00000600911 FLIIQ13045 1269 aa29.34■■■□□ 2.29
IRF3-227ENST00000600911 RLBP1P12271 317 aa29.33■■■□□ 2.29
IRF3-227ENST00000600911 TRIM27P14373 513 aa29.33■■■□□ 2.29
IRF3-227ENST00000600911 AMIGO3Q86WK7 504 aa29.33■■■□□ 2.29
IRF3-227ENST00000600911 KIF16BQ96L93 1317 aa29.32■■■□□ 2.28
IRF3-227ENST00000600911 EN1Q05925 392 aaPredicted RBP29.32■■■□□ 2.28
IRF3-227ENST00000600911 ERBB4Q15303 1308 aa29.32■■■□□ 2.28
IRF3-227ENST00000600911 ILDR2Q71H61 639 aa29.31■■■□□ 2.28
IRF3-227ENST00000600911 DEFB132Q7Z7B7 95 aa29.31■■■□□ 2.28
IRF3-227ENST00000600911 CLUAP1Q96AJ1 413 aa29.31■■■□□ 2.28
IRF3-227ENST00000600911 CCDC87Q9NVE4 849 aa29.31■■■□□ 2.28
IRF3-227ENST00000600911 EZH2Q15910 746 aaKnown RBP29.31■■■□□ 2.28
IRF3-227ENST00000600911 XAGE3Q8WTP9 111 aa29.31■■■□□ 2.28
IRF3-227ENST00000600911 NUP188Q5SRE5 1749 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 F6X3S4 739 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 AIMP1Q12904 312 aaKnown RBP29.3■■■□□ 2.28
IRF3-227ENST00000600911 ZKSCAN2Q63HK3 967 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 TTLL7Q6ZT98 887 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 PANK1Q8TE04 598 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 CAMKK2Q96RR4 588 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 HYPKQ9NX55 129 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 UBR3Q6ZT12 1888 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 ARFGEF2Q9Y6D5 1785 aa29.3■■■□□ 2.28
IRF3-227ENST00000600911 TUBGCP6Q96RT7 1819 aa29.29■■■□□ 2.28
IRF3-227ENST00000600911 ATF7IPQ6VMQ6 1270 aa29.29■■■□□ 2.28
IRF3-227ENST00000600911 COPS6Q7L5N1 327 aa29.29■■■□□ 2.28
IRF3-227ENST00000600911 ADCY9O60503 1353 aa29.28■■■□□ 2.28
IRF3-227ENST00000600911 CNTNAP4Q9C0A0 1308 aa29.28■■■□□ 2.28
IRF3-227ENST00000600911 SLC27A3Q5K4L6 730 aa29.27■■■□□ 2.28
IRF3-227ENST00000600911 ZNF330Q9Y3S2 320 aaPredicted RBP29.27■■■□□ 2.28
IRF3-227ENST00000600911 FKBP5Q13451 457 aaPredicted RBP29.27■■■□□ 2.28
IRF3-227ENST00000600911 PTPRCP08575 1304 aa29.26■■■□□ 2.27
IRF3-227ENST00000600911 N4BP2Q86UW6 1770 aaPredicted RBP29.25■■■□□ 2.27
IRF3-227ENST00000600911 EIF5P55010 431 aaKnown RBP29.25■■■□□ 2.27
IRF3-227ENST00000600911 ARHGAP45Q92619 1136 aa29.25■■■□□ 2.27
IRF3-227ENST00000600911 CHMP4AQ9BY43 222 aa29.25■■■□□ 2.27
IRF3-227ENST00000600911 C4AP0C0L4 1744 aa29.25■■■□□ 2.27
IRF3-227ENST00000600911 ABCC4O15439 1325 aa29.23■■■□□ 2.27
IRF3-227ENST00000600911 PI4KAP2A4QPH2 592 aa29.23■■■□□ 2.27
IRF3-227ENST00000600911 IL6STP40189 918 aaPredicted RBP29.23■■■□□ 2.27
IRF3-227ENST00000600911 PI4KAP1Q8N8J0 262 aa29.23■■■□□ 2.27
IRF3-227ENST00000600911 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.23■■■□□ 2.27
IRF3-227ENST00000600911 ZNF827Q17R98 1081 aa29.22■■■□□ 2.27
IRF3-227ENST00000600911 RC3H1Q5TC82 1133 aaKnown RBP29.22■■■□□ 2.27
IRF3-227ENST00000600911 GNPATO15228 680 aa29.21■■■□□ 2.27
IRF3-227ENST00000600911 IPO8O15397 1037 aaKnown RBP29.21■■■□□ 2.27
IRF3-227ENST00000600911 DZIP1LQ8IYY4 767 aaKnown RBP29.21■■■□□ 2.27
IRF3-227ENST00000600911 TMEM57Q8N5G2 664 aa29.21■■■□□ 2.27
IRF3-227ENST00000600911 BCORQ6W2J9 1755 aa29.21■■■□□ 2.27
IRF3-227ENST00000600911 UPF1Q92900 1129 aaKnown RBP eCLIP29.2■■■□□ 2.27
IRF3-227ENST00000600911 NUP98P52948 1817 aa29.2■■■□□ 2.27
IRF3-227ENST00000600911 COL15A1P39059 1388 aa29.2■■■□□ 2.26
IRF3-227ENST00000600911 CRBNQ96SW2 442 aa29.2■■■□□ 2.26
IRF3-227ENST00000600911 API5Q9BZZ5 524 aaKnown RBP29.2■■■□□ 2.26
IRF3-227ENST00000600911 MAP3K2Q9Y2U5 619 aa29.2■■■□□ 2.26
IRF3-227ENST00000600911 COG6Q9Y2V7 657 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms