RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 ADRA2BP18089 450 aa19.07■□□□□ 0.64
LTBP4-228ENST00000600499 AMIGO3Q86WK7 504 aa19.07■□□□□ 0.64
LTBP4-228ENST00000600499 SLC16A10Q8TF71 515 aa19.07■□□□□ 0.64
LTBP4-228ENST00000600499 CCDC87Q9NVE4 849 aa19.06■□□□□ 0.64
LTBP4-228ENST00000600499 USP16Q9Y5T5 823 aa19.06■□□□□ 0.64
LTBP4-228ENST00000600499 COL24A1Q17RW2 1714 aa19.05■□□□□ 0.64
LTBP4-228ENST00000600499 GNPATO15228 680 aa19.05■□□□□ 0.64
LTBP4-228ENST00000600499 COL23A1Q86Y22 540 aaPredicted RBP19.05■□□□□ 0.64
LTBP4-228ENST00000600499 PDGFDQ9GZP0 370 aaPredicted RBP19.05■□□□□ 0.64
LTBP4-228ENST00000600499 MBIPQ9NS73 344 aa19.05■□□□□ 0.64
LTBP4-228ENST00000600499 RTCBQ9Y3I0 505 aaKnown RBP19.05■□□□□ 0.64
LTBP4-228ENST00000600499 LAMB4A4D0S4 1761 aa19.04■□□□□ 0.64
LTBP4-228ENST00000600499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.04■□□□□ 0.64
LTBP4-228ENST00000600499 PRAMEF22A3QJZ6 481 aa19.04■□□□□ 0.64
LTBP4-228ENST00000600499 SOS1Q07889 1333 aaPredicted RBP19.03■□□□□ 0.64
LTBP4-228ENST00000600499 HOXB7P09629 217 aa19.03■□□□□ 0.64
LTBP4-228ENST00000600499 ZBTB1Q9Y2K1 713 aa19.03■□□□□ 0.64
LTBP4-228ENST00000600499 EIF5P55010 431 aaKnown RBP19.02■□□□□ 0.64
LTBP4-228ENST00000600499 IL6STP40189 918 aaPredicted RBP19.01■□□□□ 0.63
LTBP4-228ENST00000600499 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
LTBP4-228ENST00000600499 ARHGEF1Q92888 912 aaKnown RBP19.01■□□□□ 0.63
LTBP4-228ENST00000600499 MTFR1LQ9H019 292 aa19.01■□□□□ 0.63
LTBP4-228ENST00000600499 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
LTBP4-228ENST00000600499 ERBB4Q15303 1308 aa19■□□□□ 0.63
LTBP4-228ENST00000600499 SENP3-EIF4A1A0A087X0R7 540 aa19■□□□□ 0.63
LTBP4-228ENST00000600499 A1BGP04217 495 aa19■□□□□ 0.63
LTBP4-228ENST00000600499 LRP5O75197 1615 aa19■□□□□ 0.63
LTBP4-228ENST00000600499 SGIP1Q9BQI5 828 aa18.99■□□□□ 0.63
LTBP4-228ENST00000600499 SALL2Q9Y467 1007 aaPredicted RBP18.99■□□□□ 0.63
LTBP4-228ENST00000600499 C4AP0C0L4 1744 aa18.99■□□□□ 0.63
LTBP4-228ENST00000600499 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
LTBP4-228ENST00000600499 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
LTBP4-228ENST00000600499 SMIM5Q71RC9 77 aa18.98■□□□□ 0.63
LTBP4-228ENST00000600499 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
LTBP4-228ENST00000600499 COL15A1P39059 1388 aa18.97■□□□□ 0.63
LTBP4-228ENST00000600499 PHF14O94880 888 aa18.97■□□□□ 0.63
LTBP4-228ENST00000600499 PTGER2P43116 358 aa18.97■□□□□ 0.63
LTBP4-228ENST00000600499 KRT24Q2M2I5 525 aa18.97■□□□□ 0.63
LTBP4-228ENST00000600499 SPON1Q9HCB6 807 aa18.97■□□□□ 0.63
LTBP4-228ENST00000600499 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
LTBP4-228ENST00000600499 A0A087WZG4 1122 aa18.96■□□□□ 0.63
LTBP4-228ENST00000600499 CANXP27824 592 aaKnown RBP18.96■□□□□ 0.63
LTBP4-228ENST00000600499 PDIA6Q15084 440 aa18.96■□□□□ 0.63
LTBP4-228ENST00000600499 LRP10Q7Z4F1 713 aa18.96■□□□□ 0.63
LTBP4-228ENST00000600499 USP42Q9H9J4 1324 aaKnown RBP18.96■□□□□ 0.63
LTBP4-228ENST00000600499 RGL2O15211 777 aa18.95■□□□□ 0.62
LTBP4-228ENST00000600499 ZBTB7AO95365 584 aa18.95■□□□□ 0.62
LTBP4-228ENST00000600499 RFC4P35249 363 aa18.95■□□□□ 0.62
LTBP4-228ENST00000600499 DUSP27Q5VZP5 1158 aa18.95■□□□□ 0.62
LTBP4-228ENST00000600499 TSR2Q969E8 191 aaKnown RBP18.95■□□□□ 0.62
LTBP4-228ENST00000600499 NARFQ9UHQ1 456 aa18.95■□□□□ 0.62
LTBP4-228ENST00000600499 FANCIQ9NVI1 1328 aa18.95■□□□□ 0.62
LTBP4-228ENST00000600499 GOLGA2Q08379 1002 aa18.94■□□□□ 0.62
LTBP4-228ENST00000600499 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
LTBP4-228ENST00000600499 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
LTBP4-228ENST00000600499 GYS1P13807 737 aa18.93■□□□□ 0.62
LTBP4-228ENST00000600499 TRMT2AQ8IZ69 625 aaKnown RBP18.93■□□□□ 0.62
LTBP4-228ENST00000600499 NLGN1Q8N2Q7 840 aa18.93■□□□□ 0.62
LTBP4-228ENST00000600499 CHMP4AQ9BY43 222 aa18.93■□□□□ 0.62
LTBP4-228ENST00000600499 E9PSI1 815 aa18.92■□□□□ 0.62
LTBP4-228ENST00000600499 SLFN5Q08AF3 891 aa18.92■□□□□ 0.62
LTBP4-228ENST00000600499 ATF5Q9Y2D1 282 aaPredicted RBP18.92■□□□□ 0.62
LTBP4-228ENST00000600499 MSH5O43196 834 aa18.91■□□□□ 0.62
LTBP4-228ENST00000600499 TSPYL6Q8N831 410 aa18.91■□□□□ 0.62
LTBP4-228ENST00000600499 BCL2L12Q9HB09 334 aa18.91■□□□□ 0.62
LTBP4-228ENST00000600499 DDX21Q9NR30 783 aaKnown RBP eCLIP18.91■□□□□ 0.62
LTBP4-228ENST00000600499 ZPR1O75312 459 aa18.9■□□□□ 0.62
LTBP4-228ENST00000600499 CAMTA2O94983 1202 aa18.9■□□□□ 0.62
LTBP4-228ENST00000600499 EIF2S2P20042 333 aaKnown RBP18.9■□□□□ 0.62
LTBP4-228ENST00000600499 HDGFL1Q5TGJ6 251 aa18.9■□□□□ 0.62
LTBP4-228ENST00000600499 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
LTBP4-228ENST00000600499 SCN7AQ01118 1682 aa18.89■□□□□ 0.61
LTBP4-228ENST00000600499 PIP4K2AP48426 406 aaPredicted RBP18.89■□□□□ 0.61
LTBP4-228ENST00000600499 CLEC4GQ6UXB4 293 aa18.89■□□□□ 0.61
LTBP4-228ENST00000600499 DBF4Q9UBU7 674 aaPredicted RBP18.89■□□□□ 0.61
LTBP4-228ENST00000600499 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
LTBP4-228ENST00000600499 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
LTBP4-228ENST00000600499 VAMP4O75379 141 aa18.88■□□□□ 0.61
LTBP4-228ENST00000600499 TM4SF1P30408 202 aa18.88■□□□□ 0.61
LTBP4-228ENST00000600499 TWISTNBQ3B726 338 aaPredicted RBP18.88■□□□□ 0.61
LTBP4-228ENST00000600499 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
LTBP4-228ENST00000600499 DZIP3Q86Y13 1208 aaKnown RBP18.88■□□□□ 0.61
LTBP4-228ENST00000600499 ERVV-1B6SEH8 477 aa18.87■□□□□ 0.61
LTBP4-228ENST00000600499 ELL2O00472 640 aaPredicted RBP18.87■□□□□ 0.61
LTBP4-228ENST00000600499 POLD1P28340 1107 aa18.87■□□□□ 0.61
LTBP4-228ENST00000600499 EXOSC9Q06265 439 aaKnown RBP18.87■□□□□ 0.61
LTBP4-228ENST00000600499 FKBP8Q14318 412 aa18.87■□□□□ 0.61
LTBP4-228ENST00000600499 PROSER3Q2NL68 480 aa18.87■□□□□ 0.61
LTBP4-228ENST00000600499 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
LTBP4-228ENST00000600499 TBC1D2BQ9UPU7 963 aa18.87■□□□□ 0.61
LTBP4-228ENST00000600499 HNRNPUQ00839 825 aaKnown RBP eCLIP18.86■□□□□ 0.61
LTBP4-228ENST00000600499 CCDC30Q5VVM6 783 aa18.86■□□□□ 0.61
LTBP4-228ENST00000600499 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
LTBP4-228ENST00000600499 CDCA7LQ96GN5 454 aa18.86■□□□□ 0.61
LTBP4-228ENST00000600499 HYPKQ9NX55 129 aa18.86■□□□□ 0.61
LTBP4-228ENST00000600499 CHPF2Q9P2E5 772 aa18.86■□□□□ 0.61
LTBP4-228ENST00000600499 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
LTBP4-228ENST00000600499 MYL6BP14649 208 aa18.85■□□□□ 0.61
LTBP4-228ENST00000600499 ARXQ96QS3 562 aa18.85■□□□□ 0.61
LTBP4-228ENST00000600499 MAP3K15Q6ZN16 1313 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms