RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 COL5A3P25940 1745 aaPredicted RBP18.41■□□□□ 0.54
XRCC1-207ENST00000598165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.41■□□□□ 0.54
XRCC1-207ENST00000598165 CHL1O00533 1208 aa18.41■□□□□ 0.54
XRCC1-207ENST00000598165 COL23A1Q86Y22 540 aaPredicted RBP18.41■□□□□ 0.54
XRCC1-207ENST00000598165 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
XRCC1-207ENST00000598165 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
XRCC1-207ENST00000598165 MTFR1LQ9H019 292 aa18.41■□□□□ 0.54
XRCC1-207ENST00000598165 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
XRCC1-207ENST00000598165 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 GNAI1P63096 354 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 INTS5Q6P9B9 1019 aaKnown RBP18.4■□□□□ 0.54
XRCC1-207ENST00000598165 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 SGIP1Q9BQI5 828 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
XRCC1-207ENST00000598165 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
XRCC1-207ENST00000598165 SMIM5Q71RC9 77 aa18.39■□□□□ 0.53
XRCC1-207ENST00000598165 SLC16A10Q8TF71 515 aa18.39■□□□□ 0.53
XRCC1-207ENST00000598165 SYT17Q9BSW7 474 aa18.39■□□□□ 0.53
XRCC1-207ENST00000598165 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.53
XRCC1-207ENST00000598165 PRAMEF22A3QJZ6 481 aa18.38■□□□□ 0.53
XRCC1-207ENST00000598165 GIGYF1O75420 1035 aaPredicted RBP18.38■□□□□ 0.53
XRCC1-207ENST00000598165 ADRA2BP18089 450 aa18.38■□□□□ 0.53
XRCC1-207ENST00000598165 ZNF784Q8NCA9 323 aaPredicted RBP18.38■□□□□ 0.53
XRCC1-207ENST00000598165 ZBTB1Q9Y2K1 713 aa18.38■□□□□ 0.53
XRCC1-207ENST00000598165 USP16Q9Y5T5 823 aa18.38■□□□□ 0.53
XRCC1-207ENST00000598165 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
XRCC1-207ENST00000598165 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
XRCC1-207ENST00000598165 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
XRCC1-207ENST00000598165 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
XRCC1-207ENST00000598165 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
XRCC1-207ENST00000598165 SOS1Q07889 1333 aaPredicted RBP18.35■□□□□ 0.53
XRCC1-207ENST00000598165 IL16Q14005 1332 aa18.35■□□□□ 0.53
XRCC1-207ENST00000598165 A1BGP04217 495 aa18.35■□□□□ 0.53
XRCC1-207ENST00000598165 RFC4P35249 363 aa18.35■□□□□ 0.53
XRCC1-207ENST00000598165 WDR63Q8IWG1 891 aa18.35■□□□□ 0.53
XRCC1-207ENST00000598165 ARHGEF1Q92888 912 aaKnown RBP18.35■□□□□ 0.53
XRCC1-207ENST00000598165 ARXQ96QS3 562 aa18.34■□□□□ 0.53
XRCC1-207ENST00000598165 IL6STP40189 918 aaPredicted RBP18.33■□□□□ 0.52
XRCC1-207ENST00000598165 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.52
XRCC1-207ENST00000598165 GOLGB1Q14789 3259 aaKnown RBP18.33■□□□□ 0.52
XRCC1-207ENST00000598165 COL15A1P39059 1388 aa18.32■□□□□ 0.52
XRCC1-207ENST00000598165 EIF5P55010 431 aaKnown RBP18.32■□□□□ 0.52
XRCC1-207ENST00000598165 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
XRCC1-207ENST00000598165 ZNF330Q9Y3S2 320 aaPredicted RBP18.32■□□□□ 0.52
XRCC1-207ENST00000598165 A0A087WZG4 1122 aa18.31■□□□□ 0.52
XRCC1-207ENST00000598165 ZPR1O75312 459 aa18.3■□□□□ 0.52
XRCC1-207ENST00000598165 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
XRCC1-207ENST00000598165 POLD1P28340 1107 aa18.3■□□□□ 0.52
XRCC1-207ENST00000598165 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
XRCC1-207ENST00000598165 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
XRCC1-207ENST00000598165 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
XRCC1-207ENST00000598165 USP42Q9H9J4 1324 aaKnown RBP18.29■□□□□ 0.52
XRCC1-207ENST00000598165 NBPF26B4DH59 902 aa18.29■□□□□ 0.52
XRCC1-207ENST00000598165 HOXB7P09629 217 aa18.29■□□□□ 0.52
XRCC1-207ENST00000598165 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
XRCC1-207ENST00000598165 NBPF10Q6P3W6 841 aaKnown RBP18.29■□□□□ 0.52
XRCC1-207ENST00000598165 NBPF15Q8N660 670 aa18.29■□□□□ 0.52
XRCC1-207ENST00000598165 LAMB4A4D0S4 1761 aa18.29■□□□□ 0.52
XRCC1-207ENST00000598165 ERBB4Q15303 1308 aa18.28■□□□□ 0.52
XRCC1-207ENST00000598165 ZNF521Q96K83 1311 aa18.28■□□□□ 0.52
XRCC1-207ENST00000598165 SRP68Q9UHB9 627 aaKnown RBP18.28■□□□□ 0.52
XRCC1-207ENST00000598165 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
XRCC1-207ENST00000598165 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
XRCC1-207ENST00000598165 GYS1P13807 737 aa18.27■□□□□ 0.52
XRCC1-207ENST00000598165 USPL1Q5W0Q7 1092 aa18.27■□□□□ 0.52
XRCC1-207ENST00000598165 NLGN1Q8N2Q7 840 aa18.27■□□□□ 0.52
XRCC1-207ENST00000598165 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
XRCC1-207ENST00000598165 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 MYL6BP14649 208 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 KLHL34Q8N239 644 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 C8orf58Q8NAV2 365 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-207ENST00000598165 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
XRCC1-207ENST00000598165 DZIP3Q86Y13 1208 aaKnown RBP18.25■□□□□ 0.51
XRCC1-207ENST00000598165 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
XRCC1-207ENST00000598165 FKBP8Q14318 412 aa18.23■□□□□ 0.51
XRCC1-207ENST00000598165 PDIA6Q15084 440 aa18.23■□□□□ 0.51
XRCC1-207ENST00000598165 GPR162Q16538 588 aa18.23■□□□□ 0.51
XRCC1-207ENST00000598165 TSPYL6Q8N831 410 aa18.23■□□□□ 0.51
XRCC1-207ENST00000598165 E9PSI1 815 aa18.22■□□□□ 0.51
XRCC1-207ENST00000598165 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
XRCC1-207ENST00000598165 MMP10P09238 476 aa18.22■□□□□ 0.51
XRCC1-207ENST00000598165 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
XRCC1-207ENST00000598165 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
XRCC1-207ENST00000598165 BCL2L12Q9HB09 334 aa18.22■□□□□ 0.51
XRCC1-207ENST00000598165 DDX21Q9NR30 783 aaKnown RBP eCLIP18.22■□□□□ 0.51
XRCC1-207ENST00000598165 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
XRCC1-207ENST00000598165 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
XRCC1-207ENST00000598165 ANXA1P04083 346 aa18.21■□□□□ 0.51
XRCC1-207ENST00000598165 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
XRCC1-207ENST00000598165 PROSER3Q2NL68 480 aa18.21■□□□□ 0.51
XRCC1-207ENST00000598165 DBF4Q9UBU7 674 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-207ENST00000598165 C1QTNF8P60827 252 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 897.8 ms