RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
LIG1-208ENST00000595758 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
LIG1-208ENST00000595758 PRAMEF22A3QJZ6 481 aa18.71■□□□□ 0.59
LIG1-208ENST00000595758 ZNF853P0CG23 659 aa18.71■□□□□ 0.59
LIG1-208ENST00000595758 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
LIG1-208ENST00000595758 KDM3BQ7LBC6 1761 aa18.7■□□□□ 0.58
LIG1-208ENST00000595758 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
LIG1-208ENST00000595758 ZBTB7AO95365 584 aa18.7■□□□□ 0.58
LIG1-208ENST00000595758 TRAPPC3LQ5T215 181 aa18.7■□□□□ 0.58
LIG1-208ENST00000595758 ADRA2BP18089 450 aa18.69■□□□□ 0.58
LIG1-208ENST00000595758 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
LIG1-208ENST00000595758 MBIPQ9NS73 344 aa18.69■□□□□ 0.58
LIG1-208ENST00000595758 ZBTB1Q9Y2K1 713 aa18.69■□□□□ 0.58
LIG1-208ENST00000595758 QSER1Q2KHR3 1735 aa18.69■□□□□ 0.58
LIG1-208ENST00000595758 MYH14Q7Z406 1995 aaKnown RBP18.68■□□□□ 0.58
LIG1-208ENST00000595758 TUBGCP6Q96RT7 1819 aa18.68■□□□□ 0.58
LIG1-208ENST00000595758 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
LIG1-208ENST00000595758 WDR63Q8IWG1 891 aa18.68■□□□□ 0.58
LIG1-208ENST00000595758 IL16Q14005 1332 aa18.68■□□□□ 0.58
LIG1-208ENST00000595758 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
LIG1-208ENST00000595758 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
LIG1-208ENST00000595758 A1BGP04217 495 aa18.67■□□□□ 0.58
LIG1-208ENST00000595758 ARHGEF1Q92888 912 aaKnown RBP18.67■□□□□ 0.58
LIG1-208ENST00000595758 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
LIG1-208ENST00000595758 SPON1Q9HCB6 807 aa18.67■□□□□ 0.58
LIG1-208ENST00000595758 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
LIG1-208ENST00000595758 SOS1Q07889 1333 aaPredicted RBP18.67■□□□□ 0.58
LIG1-208ENST00000595758 RFC4P35249 363 aa18.65■□□□□ 0.58
LIG1-208ENST00000595758 KRT24Q2M2I5 525 aa18.65■□□□□ 0.58
LIG1-208ENST00000595758 EIF2S2P20042 333 aaKnown RBP18.63■□□□□ 0.57
LIG1-208ENST00000595758 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
LIG1-208ENST00000595758 EIF5P55010 431 aaKnown RBP18.63■□□□□ 0.57
LIG1-208ENST00000595758 NPM2Q86SE8 214 aaKnown RBP18.63■□□□□ 0.57
LIG1-208ENST00000595758 TSR2Q969E8 191 aaKnown RBP18.63■□□□□ 0.57
LIG1-208ENST00000595758 ZNF330Q9Y3S2 320 aaPredicted RBP18.63■□□□□ 0.57
LIG1-208ENST00000595758 A0A087WZG4 1122 aa18.62■□□□□ 0.57
LIG1-208ENST00000595758 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
LIG1-208ENST00000595758 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
LIG1-208ENST00000595758 DUSP27Q5VZP5 1158 aa18.62■□□□□ 0.57
LIG1-208ENST00000595758 MSL1Q68DK7 614 aa18.62■□□□□ 0.57
LIG1-208ENST00000595758 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
LIG1-208ENST00000595758 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
LIG1-208ENST00000595758 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
LIG1-208ENST00000595758 COL15A1P39059 1388 aa18.61■□□□□ 0.57
LIG1-208ENST00000595758 ZPR1O75312 459 aa18.61■□□□□ 0.57
LIG1-208ENST00000595758 HOXB7P09629 217 aa18.61■□□□□ 0.57
LIG1-208ENST00000595758 PTGER2P43116 358 aa18.6■□□□□ 0.57
LIG1-208ENST00000595758 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
LIG1-208ENST00000595758 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
LIG1-208ENST00000595758 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
LIG1-208ENST00000595758 ERBB4Q15303 1308 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 USP42Q9H9J4 1324 aaKnown RBP18.59■□□□□ 0.57
LIG1-208ENST00000595758 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
LIG1-208ENST00000595758 POLD1P28340 1107 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 NLGN1Q8N2Q7 840 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 NECTIN2Q92692 538 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 ARXQ96QS3 562 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
LIG1-208ENST00000595758 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
LIG1-208ENST00000595758 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.57
LIG1-208ENST00000595758 GYS1P13807 737 aa18.58■□□□□ 0.56
LIG1-208ENST00000595758 HDGFL1Q5TGJ6 251 aa18.58■□□□□ 0.56
LIG1-208ENST00000595758 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
LIG1-208ENST00000595758 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
LIG1-208ENST00000595758 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
LIG1-208ENST00000595758 MYL6BP14649 208 aa18.57■□□□□ 0.56
LIG1-208ENST00000595758 PPP1R1BQ9UD71 204 aaPredicted RBP18.57■□□□□ 0.56
LIG1-208ENST00000595758 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
LIG1-208ENST00000595758 DZIP3Q86Y13 1208 aaKnown RBP18.56■□□□□ 0.56
LIG1-208ENST00000595758 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
LIG1-208ENST00000595758 LRP5O75197 1615 aa18.56■□□□□ 0.56
LIG1-208ENST00000595758 E9PSI1 815 aa18.55■□□□□ 0.56
LIG1-208ENST00000595758 FKBP8Q14318 412 aa18.55■□□□□ 0.56
LIG1-208ENST00000595758 PDIA6Q15084 440 aa18.55■□□□□ 0.56
LIG1-208ENST00000595758 CHMP4AQ9BY43 222 aa18.55■□□□□ 0.56
LIG1-208ENST00000595758 C4AP0C0L4 1744 aa18.54■□□□□ 0.56
LIG1-208ENST00000595758 MMP10P09238 476 aa18.54■□□□□ 0.56
LIG1-208ENST00000595758 EXOSC9Q06265 439 aaKnown RBP18.54■□□□□ 0.56
LIG1-208ENST00000595758 PROSER3Q2NL68 480 aa18.54■□□□□ 0.56
LIG1-208ENST00000595758 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
LIG1-208ENST00000595758 DDX21Q9NR30 783 aaKnown RBP eCLIP18.54■□□□□ 0.56
LIG1-208ENST00000595758 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
LIG1-208ENST00000595758 CAMTA2O94983 1202 aa18.53■□□□□ 0.56
LIG1-208ENST00000595758 ANXA1P04083 346 aa18.53■□□□□ 0.56
LIG1-208ENST00000595758 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
LIG1-208ENST00000595758 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
LIG1-208ENST00000595758 DBF4Q9UBU7 674 aaPredicted RBP18.53■□□□□ 0.56
LIG1-208ENST00000595758 CCDC30Q5VVM6 783 aa18.52■□□□□ 0.56
LIG1-208ENST00000595758 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
LIG1-208ENST00000595758 CDCA7LQ96GN5 454 aa18.52■□□□□ 0.56
LIG1-208ENST00000595758 KIF6Q6ZMV9 814 aa18.51■□□□□ 0.55
LIG1-208ENST00000595758 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
LIG1-208ENST00000595758 COL24A1Q17RW2 1714 aa18.51■□□□□ 0.55
LIG1-208ENST00000595758 TM4SF1P30408 202 aa18.5■□□□□ 0.55
LIG1-208ENST00000595758 HYPKQ9NX55 129 aa18.5■□□□□ 0.55
LIG1-208ENST00000595758 ZNF652Q9Y2D9 606 aa18.5■□□□□ 0.55
LIG1-208ENST00000595758 PARP3Q9Y6F1 533 aa18.5■□□□□ 0.55
LIG1-208ENST00000595758 ERVV-1B6SEH8 477 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms