RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 RPUSD2Q8IZ73 545 aaKnown RBP5.32□□□□□ -1.56
LRIT3-202ENST00000594814 ZNF521Q96K83 1311 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 CHAF1AQ13111 956 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-202ENST00000594814 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 TACO1Q9BSH4 297 aaKnown RBP5.31□□□□□ -1.56
LRIT3-202ENST00000594814 SPTLC3Q9NUV7 552 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 UTRNP46939 3433 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 STRCP1A6NGW2 1772 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 RAB11FIP3O75154 756 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 KCNA1Q09470 495 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 ANKRD7Q92527 254 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 JADE2Q9NQC1 790 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 CGNQ9P2M7 1197 aaKnown RBP5.31□□□□□ -1.56
LRIT3-202ENST00000594814 KDM5AP29375 1690 aaKnown RBP5.31□□□□□ -1.56
LRIT3-202ENST00000594814 EP400Q96L91 3159 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 CT47B1P0C2W7 299 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-202ENST00000594814 NUCB2P80303 420 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 SETDB1Q15047 1291 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 NYAP1Q6ZVC0 841 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 CDK19Q9BWU1 502 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 PANK2Q9BZ23 570 aa5.31□□□□□ -1.56
LRIT3-202ENST00000594814 PLEKHG1Q9ULL1 1385 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 MBD3O95983 291 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 FGAP02671 866 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 CABP1Q9NZU7 370 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 R3HCC1Q9Y3T6 440 aaKnown RBP5.3□□□□□ -1.56
LRIT3-202ENST00000594814 SYNRGQ9UMZ2 1314 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 MAP4K4O95819 1239 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-202ENST00000594814 FAM200BP0CF97 657 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 CALRP27797 417 aaKnown RBP5.3□□□□□ -1.56
LRIT3-202ENST00000594814 PCGF5Q86SE9 256 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 SYAP1Q96A49 352 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-202ENST00000594814 CTIFO43310 598 aaKnown RBP5.3□□□□□ -1.56
LRIT3-202ENST00000594814 MYCNP04198 464 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-202ENST00000594814 LONRF3Q496Y0 759 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 SLFNL1Q499Z3 407 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 PIBF1Q8WXW3 757 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 DDX17Q92841 729 aaKnown RBP5.3□□□□□ -1.56
LRIT3-202ENST00000594814 CEP126Q9P2H0 1117 aa5.3□□□□□ -1.56
LRIT3-202ENST00000594814 KIF1CO43896 1103 aaKnown RBP5.29□□□□□ -1.56
LRIT3-202ENST00000594814 THEMISQ8N1K5 641 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-202ENST00000594814 CLUAP1Q96AJ1 413 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 BRINP2Q9C0B6 783 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 GOPCQ9HD26 462 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 RBM28Q9NW13 759 aaKnown RBP5.29□□□□□ -1.56
LRIT3-202ENST00000594814 ABCC11Q96J66 1382 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 MNS1Q8NEH6 495 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 USP32Q8NFA0 1604 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 EIF3JO75822 258 aaKnown RBP5.29□□□□□ -1.56
LRIT3-202ENST00000594814 TUBB4AP04350 444 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 TMF1P82094 1093 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 MICAL1Q8TDZ2 1067 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 RNF25Q96BH1 459 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-202ENST00000594814 USP25Q9UHP3 1055 aa5.29□□□□□ -1.56
LRIT3-202ENST00000594814 MORC2Q9Y6X9 1032 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-202ENST00000594814 DHX8Q14562 1220 aaKnown RBP5.28□□□□□ -1.56
LRIT3-202ENST00000594814 NPAS4Q8IUM7 802 aa5.28□□□□□ -1.56
LRIT3-202ENST00000594814 EPAS1Q99814 870 aa5.28□□□□□ -1.56
LRIT3-202ENST00000594814 RWDD1Q9H446 243 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-202ENST00000594814 U2SURPO15042 1029 aaKnown RBP5.28□□□□□ -1.56
LRIT3-202ENST00000594814 GOLGA2Q08379 1002 aa5.28□□□□□ -1.56
LRIT3-202ENST00000594814 FKBP5Q13451 457 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-202ENST00000594814 MUM1L1Q5H9M0 696 aa5.28□□□□□ -1.56
LRIT3-202ENST00000594814 A0A1W2PP64 1363 aa5.28□□□□□ -1.56
LRIT3-202ENST00000594814 RGPD8O14715 1765 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-202ENST00000594814 STAG1Q8WVM7 1258 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 GNL3LQ9NVN8 582 aaKnown RBP5.27□□□□□ -1.57
LRIT3-202ENST00000594814 ZHX1Q9UKY1 873 aaPredicted RBP5.27□□□□□ -1.57
LRIT3-202ENST00000594814 TBX22Q9Y458 520 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 CPS1P31327 1500 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 TECPR2O15040 1411 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 SBNO2Q9Y2G9 1366 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 WASLO00401 505 aaPredicted RBP5.27□□□□□ -1.57
LRIT3-202ENST00000594814 COQ9O75208 318 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 NBPF9Q3BBW0 867 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 DUSP27Q5VZP5 1158 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 C22orf23Q9BZE7 217 aa5.27□□□□□ -1.57
LRIT3-202ENST00000594814 V9GYY5 206 aaPredicted RBP5.27□□□□□ -1.57
LRIT3-202ENST00000594814 ZNF335Q9H4Z2 1342 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 GOLGA6L6A8MZA4 724 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 ATP8B1O43520 1251 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 SLC4A3P48751 1232 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 TRDNQ13061 729 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 LRSAM1Q6UWE0 723 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 ANKLE2Q86XL3 938 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 NLGN1Q8N2Q7 840 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 ZNF512BQ96KM6 892 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 SERINC2Q96SA4 455 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 KDM4CQ9H3R0 1056 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 FAM53CQ9NYF3 392 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 PAXBP1Q9Y5B6 917 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 DLC1Q96QB1 1528 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 XRN1Q8IZH2 1706 aaKnown RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 ANKRD36BQ8N2N9 1353 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 FYB1O15117 783 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 TBC1D12O60347 775 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 REC8O95072 547 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 IRX5P78411 483 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-202ENST00000594814 SLFN5Q08AF3 891 aa5.26□□□□□ -1.57
LRIT3-202ENST00000594814 ZNF771Q7L3S4 317 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms