RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 KRT24Q2M2I5 525 aa22.05■■□□□ 1.12
RPRD1A-209ENST00000590898 MYH14Q7Z406 1995 aaKnown RBP22.05■■□□□ 1.12
RPRD1A-209ENST00000590898 LAMB4A4D0S4 1761 aa22.04■■□□□ 1.12
RPRD1A-209ENST00000590898 PRAMEF22A3QJZ6 481 aa22.04■■□□□ 1.12
RPRD1A-209ENST00000590898 LINC00116Q8NCU8 138 aa22.04■■□□□ 1.12
RPRD1A-209ENST00000590898 TWISTNBQ3B726 338 aaPredicted RBP22.03■■□□□ 1.12
RPRD1A-209ENST00000590898 NUP188Q5SRE5 1749 aa22.03■■□□□ 1.12
RPRD1A-209ENST00000590898 TSPYL6Q8N831 410 aa22.02■■□□□ 1.12
RPRD1A-209ENST00000590898 CACNA1FO60840 1977 aa22.02■■□□□ 1.12
RPRD1A-209ENST00000590898 CNTNAP4Q9C0A0 1308 aa22.02■■□□□ 1.12
RPRD1A-209ENST00000590898 ELL2O00472 640 aaPredicted RBP22.02■■□□□ 1.11
RPRD1A-209ENST00000590898 CT47B1P0C2W7 299 aaPredicted RBP22.02■■□□□ 1.11
RPRD1A-209ENST00000590898 C4BP0C0L5 1744 aa22.01■■□□□ 1.11
RPRD1A-209ENST00000590898 VAMP4O75379 141 aa22.01■■□□□ 1.11
RPRD1A-209ENST00000590898 CRKLP46109 303 aaKnown RBP22■■□□□ 1.11
RPRD1A-209ENST00000590898 ERBB4Q15303 1308 aa22■■□□□ 1.11
RPRD1A-209ENST00000590898 ZNF428Q96B54 188 aa22■■□□□ 1.11
RPRD1A-209ENST00000590898 CCDC87Q9NVE4 849 aa22■■□□□ 1.11
RPRD1A-209ENST00000590898 EIF2S2P20042 333 aaKnown RBP21.99■■□□□ 1.11
RPRD1A-209ENST00000590898 INTS5Q6P9B9 1019 aaKnown RBP21.99■■□□□ 1.11
RPRD1A-209ENST00000590898 AKT1S1Q96B36 256 aa21.99■■□□□ 1.11
RPRD1A-209ENST00000590898 HDGFL1Q5TGJ6 251 aa21.98■■□□□ 1.11
RPRD1A-209ENST00000590898 NBPF14Q5TI25 921 aa21.98■■□□□ 1.11
RPRD1A-209ENST00000590898 CCDC30Q5VVM6 783 aa21.98■■□□□ 1.11
RPRD1A-209ENST00000590898 A1BGP04217 495 aa21.97■■□□□ 1.11
RPRD1A-209ENST00000590898 RPS6KA4O75676 772 aa21.96■■□□□ 1.11
RPRD1A-209ENST00000590898 AK7Q96M32 723 aa21.96■■□□□ 1.11
RPRD1A-209ENST00000590898 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
RPRD1A-209ENST00000590898 SLC15A2Q16348 729 aa21.96■■□□□ 1.11
RPRD1A-209ENST00000590898 IL6STP40189 918 aaPredicted RBP21.95■■□□□ 1.1
RPRD1A-209ENST00000590898 STK32BQ9NY57 414 aa21.95■■□□□ 1.1
RPRD1A-209ENST00000590898 DBF4Q9UBU7 674 aaPredicted RBP21.95■■□□□ 1.1
RPRD1A-209ENST00000590898 ZBTB1Q9Y2K1 713 aa21.95■■□□□ 1.1
RPRD1A-209ENST00000590898 DDX21Q9NR30 783 aaKnown RBP eCLIP21.94■■□□□ 1.1
RPRD1A-209ENST00000590898 RTCBQ9Y3I0 505 aaKnown RBP21.94■■□□□ 1.1
RPRD1A-209ENST00000590898 NBPF26B4DH59 902 aa21.94■■□□□ 1.1
RPRD1A-209ENST00000590898 PDIA6Q15084 440 aa21.94■■□□□ 1.1
RPRD1A-209ENST00000590898 ZNF827Q17R98 1081 aa21.94■■□□□ 1.1
RPRD1A-209ENST00000590898 NBPF10Q6P3W6 841 aaKnown RBP21.94■■□□□ 1.1
RPRD1A-209ENST00000590898 NBPF15Q8N660 670 aa21.94■■□□□ 1.1
RPRD1A-209ENST00000590898 GNPATO15228 680 aa21.93■■□□□ 1.1
RPRD1A-209ENST00000590898 EIF5P55010 431 aaKnown RBP21.93■■□□□ 1.1
RPRD1A-209ENST00000590898 FLAD1Q8NFF5 587 aa21.93■■□□□ 1.1
RPRD1A-209ENST00000590898 ANO8Q9HCE9 1232 aaPredicted RBP21.93■■□□□ 1.1
RPRD1A-209ENST00000590898 TFCP2L1Q9NZI6 479 aa21.93■■□□□ 1.1
RPRD1A-209ENST00000590898 QSER1Q2KHR3 1735 aa21.93■■□□□ 1.1
RPRD1A-209ENST00000590898 ADRA2BP18089 450 aa21.92■■□□□ 1.1
RPRD1A-209ENST00000590898 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
RPRD1A-209ENST00000590898 SSFA2P28290 1259 aa21.92■■□□□ 1.1
RPRD1A-209ENST00000590898 NECTIN2Q92692 538 aa21.92■■□□□ 1.1
RPRD1A-209ENST00000590898 STK31Q9BXU1 1019 aa21.92■■□□□ 1.1
RPRD1A-209ENST00000590898 HYPKQ9NX55 129 aa21.91■■□□□ 1.1
RPRD1A-209ENST00000590898 CHPF2Q9P2E5 772 aa21.91■■□□□ 1.1
RPRD1A-209ENST00000590898 ALDH1L2Q3SY69 923 aa21.9■■□□□ 1.1
RPRD1A-209ENST00000590898 NPM2Q86SE8 214 aaKnown RBP21.9■■□□□ 1.1
RPRD1A-209ENST00000590898 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
RPRD1A-209ENST00000590898 TRAPPC3LQ5T215 181 aa21.9■■□□□ 1.1
RPRD1A-209ENST00000590898 LRP10Q7Z4F1 713 aa21.9■■□□□ 1.1
RPRD1A-209ENST00000590898 A0A087WZG4 1122 aa21.89■■□□□ 1.09
RPRD1A-209ENST00000590898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.88■■□□□ 1.09
RPRD1A-209ENST00000590898 SLC4A2P04920 1241 aa21.88■■□□□ 1.09
RPRD1A-209ENST00000590898 MYL6BP14649 208 aa21.88■■□□□ 1.09
RPRD1A-209ENST00000590898 PIP4K2AP48426 406 aaPredicted RBP21.88■■□□□ 1.09
RPRD1A-209ENST00000590898 PROSER3Q2NL68 480 aa21.87■■□□□ 1.09
RPRD1A-209ENST00000590898 AMIGO3Q86WK7 504 aa21.87■■□□□ 1.09
RPRD1A-209ENST00000590898 COL15A1P39059 1388 aa21.86■■□□□ 1.09
RPRD1A-209ENST00000590898 BRPF1P55201 1214 aaPredicted RBP21.86■■□□□ 1.09
RPRD1A-209ENST00000590898 ARHGEF1Q92888 912 aaKnown RBP21.86■■□□□ 1.09
RPRD1A-209ENST00000590898 RARSP54136 660 aaKnown RBP21.86■■□□□ 1.09
RPRD1A-209ENST00000590898 SSH1Q8WYL5 1049 aa21.86■■□□□ 1.09
RPRD1A-209ENST00000590898 SUPT16HQ9Y5B9 1047 aaKnown RBP21.86■■□□□ 1.09
RPRD1A-209ENST00000590898 PNPLA7Q6ZV29 1317 aa21.85■■□□□ 1.09
RPRD1A-209ENST00000590898 ANXA1P04083 346 aa21.85■■□□□ 1.09
RPRD1A-209ENST00000590898 RFC4P35249 363 aa21.84■■□□□ 1.09
RPRD1A-209ENST00000590898 COL23A1Q86Y22 540 aaPredicted RBP21.84■■□□□ 1.09
RPRD1A-209ENST00000590898 TCERG1O14776 1098 aaKnown RBP21.84■■□□□ 1.09
RPRD1A-209ENST00000590898 RGL2O15211 777 aa21.84■■□□□ 1.09
RPRD1A-209ENST00000590898 PHF14O94880 888 aa21.84■■□□□ 1.09
RPRD1A-209ENST00000590898 COPS6Q7L5N1 327 aa21.84■■□□□ 1.09
RPRD1A-209ENST00000590898 ZNF330Q9Y3S2 320 aaPredicted RBP21.84■■□□□ 1.09
RPRD1A-209ENST00000590898 MRPL50Q8N5N7 158 aaKnown RBP21.83■■□□□ 1.09
RPRD1A-209ENST00000590898 NARFQ9UHQ1 456 aa21.83■■□□□ 1.09
RPRD1A-209ENST00000590898 C4AP0C0L4 1744 aa21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 DZIP3Q86Y13 1208 aaKnown RBP21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 R3HDM1Q15032 1099 aaKnown RBP21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 SLC16A10Q8TF71 515 aa21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 XAGE3Q8WTP9 111 aa21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 PHAXQ9H814 394 aaKnown RBP21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 SMC4Q9NTJ3 1288 aa21.82■■□□□ 1.08
RPRD1A-209ENST00000590898 ERVV-1B6SEH8 477 aa21.81■■□□□ 1.08
RPRD1A-209ENST00000590898 ZPR1O75312 459 aa21.81■■□□□ 1.08
RPRD1A-209ENST00000590898 TBC1D2BQ9UPU7 963 aa21.81■■□□□ 1.08
RPRD1A-209ENST00000590898 KIF6Q6ZMV9 814 aa21.8■■□□□ 1.08
RPRD1A-209ENST00000590898 TTLL7Q6ZT98 887 aa21.8■■□□□ 1.08
RPRD1A-209ENST00000590898 FLIIQ13045 1269 aa21.8■■□□□ 1.08
RPRD1A-209ENST00000590898 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
RPRD1A-209ENST00000590898 ANKRD13DQ6ZTN6 518 aa21.8■■□□□ 1.08
RPRD1A-209ENST00000590898 ARXQ96QS3 562 aa21.8■■□□□ 1.08
RPRD1A-209ENST00000590898 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms