RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 TJP1Q07157 1748 aa8.12□□□□□ -1.11
LDLRAD4-213ENST00000590115 ZNF831Q5JPB2 1677 aa8.12□□□□□ -1.11
LDLRAD4-213ENST00000590115 PCDH11XQ9BZA7 1347 aa8.12□□□□□ -1.11
LDLRAD4-213ENST00000590115 PCDH11YQ9BZA8 1340 aa8.12□□□□□ -1.11
LDLRAD4-213ENST00000590115 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
LDLRAD4-213ENST00000590115 MCM10Q7L590 875 aa8.12□□□□□ -1.11
LDLRAD4-213ENST00000590115 RUNDC1Q96C34 613 aa8.12□□□□□ -1.11
LDLRAD4-213ENST00000590115 PALLDQ8WX93 1383 aa8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 HEG1Q9ULI3 1381 aa8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 ZNF853P0CG23 659 aa8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 PLEKHO1Q53GL0 409 aaPredicted RBP8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 C9orf131Q5VYM1 1079 aa8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 BCS1LQ9Y276 419 aa8.11□□□□□ -1.11
LDLRAD4-213ENST00000590115 FOXN1O15353 648 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 AMOTQ4VCS5 1084 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 FAM9BQ8IZU0 186 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 SMC1BQ8NDV3 1235 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 RRAGCQ9HB90 399 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 NUDCQ9Y266 331 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 CACNA1SQ13698 1873 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 FER1L6Q2WGJ9 1857 aa8.1□□□□□ -1.11
LDLRAD4-213ENST00000590115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 A0A0G2JLW4 131 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 PRAMEF22A3QJZ6 481 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 PHF14O94880 888 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 SLC39A6Q13433 755 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 KRT24Q2M2I5 525 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 ARHGAP27Q6ZUM4 889 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 SLC52A2Q9HAB3 445 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 MIS18AQ9NYP9 233 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 SPG7Q9UQ90 795 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 THSD7BQ9C0I4 1608 aa8.09□□□□□ -1.11
LDLRAD4-213ENST00000590115 KDM2BQ8NHM5 1336 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 GNAT3A8MTJ3 354 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 KCNA3P22001 575 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 RIPK4P57078 832 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 ITPK1Q13572 414 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 WWC1Q8IX03 1113 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 NFATC2IPQ8NCF5 419 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 GAS2L2Q8NHY3 880 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 DCAF5Q96JK2 942 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 NRXN2Q9P2S2 1712 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 CASP8AP2Q9UKL3 1982 aa8.08□□□□□ -1.12
LDLRAD4-213ENST00000590115 ERVV-2B6SEH9 535 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 MMP10P09238 476 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 DPEP1P16444 411 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 SSFA2P28290 1259 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 TGFB2P61812 414 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 CCDC27Q2M243 656 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 TRMT2AQ8IZ69 625 aaKnown RBP8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 LINC00116Q8NCU8 138 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 CDCA7LQ96GN5 454 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 AK7Q96M32 723 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 PRDM10Q9NQV6 1147 aa8.07□□□□□ -1.12
LDLRAD4-213ENST00000590115 CHL1O00533 1208 aa8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 HTATSF1O43719 755 aaKnown RBP8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 NEUROD2Q15784 382 aa8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 NCBP3Q53F19 620 aaKnown RBP8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 LRP10Q7Z4F1 713 aa8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 ANKRD31Q8N7Z5 1873 aa8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 SCN4AP35499 1836 aa8.06□□□□□ -1.12
LDLRAD4-213ENST00000590115 ADAMTSL1Q8N6G6 1762 aa8.05□□□□□ -1.12
LDLRAD4-213ENST00000590115 ABHD8Q96I13 439 aa8.05□□□□□ -1.12
LDLRAD4-213ENST00000590115 ZNF496Q96IT1 587 aaPredicted RBP8.05□□□□□ -1.12
LDLRAD4-213ENST00000590115 COL11A2P13942 1736 aaPredicted RBP8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 LTBP1Q14766 1721 aa8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 POTECB2RU33 542 aa8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 RGS19P49795 217 aa8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 EIF4A1P60842 406 aaKnown RBP8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 TSPYL6Q8N831 410 aa8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 MKRN1Q9UHC7 482 aaKnown RBP8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 SALL2Q9Y467 1007 aaPredicted RBP8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 CNTNAP1P78357 1384 aa8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 ARFGEF2Q9Y6D5 1785 aa8.04□□□□□ -1.12
LDLRAD4-213ENST00000590115 TRPM7Q96QT4 1865 aa8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 RASSF7Q02833 373 aa8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 PDIA6Q15084 440 aa8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 C1orf141Q5JVX7 400 aa8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 ZNF790Q6PG37 636 aa8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 C8orf58Q8NAV2 365 aa8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 TSR2Q969E8 191 aaKnown RBP8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
LDLRAD4-213ENST00000590115 NBPF26B4DH59 902 aa8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 GNPATO15228 680 aa8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 HSP90AB1P08238 724 aaKnown RBP8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 CABP4P57796 275 aa8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 SLFN5Q08AF3 891 aa8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 TAF7Q15545 349 aaPredicted RBP8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 DUSP27Q5VZP5 1158 aa8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 NBPF10Q6P3W6 841 aaKnown RBP8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 INTS5Q6P9B9 1019 aaKnown RBP8.02□□□□□ -1.13
LDLRAD4-213ENST00000590115 DNAJC10Q8IXB1 793 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms