RNA–Protein interactions for RNA: ENST00000589006.1

SAFB-206, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 459 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-206ENST00000589006 ITPK1Q13572 414 aa25.82■■□□□ 1.72
SAFB-206ENST00000589006 ZNF496Q96IT1 587 aaPredicted RBP25.82■■□□□ 1.72
SAFB-206ENST00000589006 TFCP2L1Q9NZI6 479 aa25.82■■□□□ 1.72
SAFB-206ENST00000589006 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
SAFB-206ENST00000589006 CFAP44Q96MT7 982 aa25.81■■□□□ 1.72
SAFB-206ENST00000589006 ZNF853P0CG23 659 aa25.8■■□□□ 1.72
SAFB-206ENST00000589006 FMNL2Q96PY5 1086 aa25.8■■□□□ 1.72
SAFB-206ENST00000589006 HEG1Q9ULI3 1381 aa25.8■■□□□ 1.72
SAFB-206ENST00000589006 C4BP0C0L5 1744 aa25.8■■□□□ 1.72
SAFB-206ENST00000589006 LINC00116Q8NCU8 138 aa25.79■■□□□ 1.72
SAFB-206ENST00000589006 TSPYL4Q9UJ04 414 aa25.79■■□□□ 1.72
SAFB-206ENST00000589006 SALL2Q9Y467 1007 aaPredicted RBP25.79■■□□□ 1.72
SAFB-206ENST00000589006 GRIN3BO60391 1043 aa25.78■■□□□ 1.72
SAFB-206ENST00000589006 WDR63Q8IWG1 891 aa25.78■■□□□ 1.72
SAFB-206ENST00000589006 IFT57Q9NWB7 429 aa25.78■■□□□ 1.72
SAFB-206ENST00000589006 EIF4A1P60842 406 aaKnown RBP25.77■■□□□ 1.72
SAFB-206ENST00000589006 IL16Q14005 1332 aa25.77■■□□□ 1.72
SAFB-206ENST00000589006 GNAI1P63096 354 aa25.76■■□□□ 1.71
SAFB-206ENST00000589006 DNAJC10Q8IXB1 793 aa25.76■■□□□ 1.71
SAFB-206ENST00000589006 ZNF521Q96K83 1311 aa25.76■■□□□ 1.71
SAFB-206ENST00000589006 LAS1LQ9Y4W2 734 aaKnown RBP25.75■■□□□ 1.71
SAFB-206ENST00000589006 MYH14Q7Z406 1995 aaKnown RBP25.75■■□□□ 1.71
SAFB-206ENST00000589006 TEX13AQ9BXU3 409 aaPredicted RBP25.74■■□□□ 1.71
SAFB-206ENST00000589006 UBR3Q6ZT12 1888 aa25.73■■□□□ 1.71
SAFB-206ENST00000589006 SNRPA1P09661 255 aaKnown RBP25.73■■□□□ 1.71
SAFB-206ENST00000589006 RC3H1Q5TC82 1133 aaKnown RBP25.73■■□□□ 1.71
SAFB-206ENST00000589006 MBIPQ9NS73 344 aa25.73■■□□□ 1.71
SAFB-206ENST00000589006 CNTNAP4Q9C0A0 1308 aa25.72■■□□□ 1.71
SAFB-206ENST00000589006 CYP19A1P11511 503 aaPredicted RBP25.72■■□□□ 1.71
SAFB-206ENST00000589006 MSH5O43196 834 aa25.71■■□□□ 1.71
SAFB-206ENST00000589006 GPBP1L1Q9HC44 474 aaPredicted RBP25.71■■□□□ 1.71
SAFB-206ENST00000589006 LAMB4A4D0S4 1761 aa25.71■■□□□ 1.71
SAFB-206ENST00000589006 HSPA6P17066 643 aa25.7■■□□□ 1.7
SAFB-206ENST00000589006 MSL1Q68DK7 614 aa25.7■■□□□ 1.7
SAFB-206ENST00000589006 PRAMEF22A3QJZ6 481 aa25.69■■□□□ 1.7
SAFB-206ENST00000589006 CRKLP46109 303 aaKnown RBP25.69■■□□□ 1.7
SAFB-206ENST00000589006 COL23A1Q86Y22 540 aaPredicted RBP25.69■■□□□ 1.7
SAFB-206ENST00000589006 ZNF526Q8TF50 670 aaPredicted RBP25.69■■□□□ 1.7
SAFB-206ENST00000589006 USP16Q9Y5T5 823 aa25.69■■□□□ 1.7
SAFB-206ENST00000589006 STARD3NLO95772 234 aa25.68■■□□□ 1.7
SAFB-206ENST00000589006 INTS5Q6P9B9 1019 aaKnown RBP25.68■■□□□ 1.7
SAFB-206ENST00000589006 AK7Q96M32 723 aa25.68■■□□□ 1.7
SAFB-206ENST00000589006 ADCY9O60503 1353 aa25.68■■□□□ 1.7
SAFB-206ENST00000589006 SPINK5Q9NQ38 1064 aaPredicted RBP25.66■■□□□ 1.7
SAFB-206ENST00000589006 CCDC87Q9NVE4 849 aa25.66■■□□□ 1.7
SAFB-206ENST00000589006 RPS6KA4O75676 772 aa25.65■■□□□ 1.7
SAFB-206ENST00000589006 GNPATO15228 680 aa25.64■■□□□ 1.7
SAFB-206ENST00000589006 KRT24Q2M2I5 525 aa25.64■■□□□ 1.7
SAFB-206ENST00000589006 AMIGO3Q86WK7 504 aa25.64■■□□□ 1.7
SAFB-206ENST00000589006 TSR2Q969E8 191 aaKnown RBP25.64■■□□□ 1.7
SAFB-206ENST00000589006 HOXB7P09629 217 aa25.63■■□□□ 1.69
SAFB-206ENST00000589006 SSFA2P28290 1259 aa25.63■■□□□ 1.69
SAFB-206ENST00000589006 GOLGA2Q08379 1002 aa25.63■■□□□ 1.69
SAFB-206ENST00000589006 HNRNPUQ00839 825 aaKnown RBP eCLIP25.62■■□□□ 1.69
SAFB-206ENST00000589006 FLAD1Q8NFF5 587 aa25.62■■□□□ 1.69
SAFB-206ENST00000589006 ZBTB1Q9Y2K1 713 aa25.62■■□□□ 1.69
SAFB-206ENST00000589006 RTCBQ9Y3I0 505 aaKnown RBP25.62■■□□□ 1.69
SAFB-206ENST00000589006 FANCIQ9NVI1 1328 aa25.62■■□□□ 1.69
SAFB-206ENST00000589006 A1BGP04217 495 aa25.61■■□□□ 1.69
SAFB-206ENST00000589006 DUSP27Q5VZP5 1158 aa25.6■■□□□ 1.69
SAFB-206ENST00000589006 MYH16Q9H6N6 1097 aa25.6■■□□□ 1.69
SAFB-206ENST00000589006 CD2APQ9Y5K6 639 aa25.6■■□□□ 1.69
SAFB-206ENST00000589006 SOS1Q07889 1333 aaPredicted RBP25.6■■□□□ 1.69
SAFB-206ENST00000589006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.59■■□□□ 1.69
SAFB-206ENST00000589006 ADRA2BP18089 450 aa25.59■■□□□ 1.69
SAFB-206ENST00000589006 SMIM5Q71RC9 77 aa25.59■■□□□ 1.69
SAFB-206ENST00000589006 C8orf58Q8NAV2 365 aa25.59■■□□□ 1.69
SAFB-206ENST00000589006 C4AP0C0L4 1744 aa25.58■■□□□ 1.69
SAFB-206ENST00000589006 E9PSI1 815 aa25.58■■□□□ 1.69
SAFB-206ENST00000589006 SLFN5Q08AF3 891 aa25.58■■□□□ 1.69
SAFB-206ENST00000589006 CANXP27824 592 aaKnown RBP25.57■■□□□ 1.68
SAFB-206ENST00000589006 IL6STP40189 918 aaPredicted RBP25.57■■□□□ 1.68
SAFB-206ENST00000589006 EIF5P55010 431 aaKnown RBP25.57■■□□□ 1.68
SAFB-206ENST00000589006 TRAPPC3LQ5T215 181 aa25.57■■□□□ 1.68
SAFB-206ENST00000589006 ERBB4Q15303 1308 aa25.57■■□□□ 1.68
SAFB-206ENST00000589006 NBPF26B4DH59 902 aa25.56■■□□□ 1.68
SAFB-206ENST00000589006 PHF14O94880 888 aa25.56■■□□□ 1.68
SAFB-206ENST00000589006 NBPF10Q6P3W6 841 aaKnown RBP25.56■■□□□ 1.68
SAFB-206ENST00000589006 TRMT2AQ8IZ69 625 aaKnown RBP25.56■■□□□ 1.68
SAFB-206ENST00000589006 NBPF15Q8N660 670 aa25.56■■□□□ 1.68
SAFB-206ENST00000589006 ARHGEF1Q92888 912 aaKnown RBP25.56■■□□□ 1.68
SAFB-206ENST00000589006 WWC3Q9ULE0 1092 aa25.56■■□□□ 1.68
SAFB-206ENST00000589006 TSPYL6Q8N831 410 aa25.55■■□□□ 1.68
SAFB-206ENST00000589006 CDCA7LQ96GN5 454 aa25.55■■□□□ 1.68
SAFB-206ENST00000589006 ELL2O00472 640 aaPredicted RBP25.54■■□□□ 1.68
SAFB-206ENST00000589006 EIF2S2P20042 333 aaKnown RBP25.54■■□□□ 1.68
SAFB-206ENST00000589006 ZBED9Q6R2W3 1325 aa25.54■■□□□ 1.68
SAFB-206ENST00000589006 COL15A1P39059 1388 aa25.54■■□□□ 1.68
SAFB-206ENST00000589006 EXOSC9Q06265 439 aaKnown RBP25.53■■□□□ 1.68
SAFB-206ENST00000589006 PIP4K2AP48426 406 aaPredicted RBP25.52■■□□□ 1.68
SAFB-206ENST00000589006 PDIA6Q15084 440 aa25.52■■□□□ 1.68
SAFB-206ENST00000589006 HDGFL1Q5TGJ6 251 aa25.52■■□□□ 1.68
SAFB-206ENST00000589006 KIF3CO14782 793 aa25.51■■□□□ 1.67
SAFB-206ENST00000589006 TWISTNBQ3B726 338 aaPredicted RBP25.51■■□□□ 1.67
SAFB-206ENST00000589006 A0A087WZG4 1122 aa25.5■■□□□ 1.67
SAFB-206ENST00000589006 RFC4P35249 363 aa25.5■■□□□ 1.67
SAFB-206ENST00000589006 LRP10Q7Z4F1 713 aa25.5■■□□□ 1.67
SAFB-206ENST00000589006 CHMP4AQ9BY43 222 aa25.5■■□□□ 1.67
SAFB-206ENST00000589006 VAMP4O75379 141 aa25.49■■□□□ 1.67
SAFB-206ENST00000589006 NECTIN2Q92692 538 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms