RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-206ENST00000588860 HDAC1Q13547 482 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-206ENST00000588860 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
SMAD4-206ENST00000588860 COL14A1Q05707 1796 aaKnown RBP11.07□□□□□ -0.64
SMAD4-206ENST00000588860 COL5A2P05997 1499 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-206ENST00000588860 BTBD11A6QL63 1104 aa11.06□□□□□ -0.64
SMAD4-206ENST00000588860 ZBTB7BO15156 539 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-206ENST00000588860 PROM2Q8N271 834 aa11.06□□□□□ -0.64
SMAD4-206ENST00000588860 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
SMAD4-206ENST00000588860 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
SMAD4-206ENST00000588860 SPG7Q9UQ90 795 aa11.06□□□□□ -0.64
SMAD4-206ENST00000588860 LAMB4A4D0S4 1761 aa11.05□□□□□ -0.64
SMAD4-206ENST00000588860 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
SMAD4-206ENST00000588860 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
SMAD4-206ENST00000588860 INTS3Q68E01 1043 aaKnown RBP11.05□□□□□ -0.64
SMAD4-206ENST00000588860 G2E3Q7L622 706 aa11.05□□□□□ -0.64
SMAD4-206ENST00000588860 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
SMAD4-206ENST00000588860 C1orf115Q9H7X2 142 aa11.05□□□□□ -0.64
SMAD4-206ENST00000588860 TRPC5Q9UL62 973 aaPredicted RBP11.05□□□□□ -0.64
SMAD4-206ENST00000588860 MRC1P22897 1456 aa11.05□□□□□ -0.64
SMAD4-206ENST00000588860 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
SMAD4-206ENST00000588860 KCNQ3O43525 872 aa11.04□□□□□ -0.64
SMAD4-206ENST00000588860 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
SMAD4-206ENST00000588860 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
SMAD4-206ENST00000588860 USP21Q9UK80 565 aa11.04□□□□□ -0.64
SMAD4-206ENST00000588860 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
SMAD4-206ENST00000588860 EP400Q96L91 3159 aa11.04□□□□□ -0.64
SMAD4-206ENST00000588860 POTEMA6NI47 508 aa11.03□□□□□ -0.64
SMAD4-206ENST00000588860 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
SMAD4-206ENST00000588860 HOXB7P09629 217 aa11.03□□□□□ -0.64
SMAD4-206ENST00000588860 PHKG2P15735 406 aa11.03□□□□□ -0.64
SMAD4-206ENST00000588860 TOM1L2Q6ZVM7 507 aa11.03□□□□□ -0.64
SMAD4-206ENST00000588860 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
SMAD4-206ENST00000588860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.641e-7■□□□□ 11.2
SMAD4-206ENST00000588860 PXDNLA1KZ92 1463 aa11.03□□□□□ -0.64
SMAD4-206ENST00000588860 CCT4P50991 539 aaKnown RBP11.02□□□□□ -0.65
SMAD4-206ENST00000588860 FLIIQ13045 1269 aa11.02□□□□□ -0.65
SMAD4-206ENST00000588860 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
SMAD4-206ENST00000588860 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
SMAD4-206ENST00000588860 IFNL2Q8IZJ0 200 aa11.02□□□□□ -0.65
SMAD4-206ENST00000588860 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.65
SMAD4-206ENST00000588860 PAPPAQ13219 1627 aa11.02□□□□□ -0.65
SMAD4-206ENST00000588860 ITGB4P16144 1822 aa11.01□□□□□ -0.65
SMAD4-206ENST00000588860 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
SMAD4-206ENST00000588860 PSDA5PKW4 1024 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-206ENST00000588860 F6X3S4 739 aa11.01□□□□□ -0.65
SMAD4-206ENST00000588860 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
SMAD4-206ENST00000588860 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
SMAD4-206ENST00000588860 EVA1CP58658 441 aa11.01□□□□□ -0.65
SMAD4-206ENST00000588860 FKBP5Q13451 457 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-206ENST00000588860 ASTLQ6HA08 431 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-206ENST00000588860 SMC5Q8IY18 1101 aa11.01□□□□□ -0.65
SMAD4-206ENST00000588860 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
SMAD4-206ENST00000588860 STRN4Q9NRL3 753 aa11.01□□□□□ -0.65
SMAD4-206ENST00000588860 TOGARAM1Q9Y4F4 1720 aa11.01□□□□□ -0.65
SMAD4-206ENST00000588860 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
SMAD4-206ENST00000588860 C8orf34Q49A92 452 aa11□□□□□ -0.65
SMAD4-206ENST00000588860 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
SMAD4-206ENST00000588860 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
SMAD4-206ENST00000588860 KAT6BQ8WYB5 2073 aa11□□□□□ -0.65
SMAD4-206ENST00000588860 NRAPQ86VF7 1730 aa11□□□□□ -0.65
SMAD4-206ENST00000588860 ATP10DQ9P241 1426 aa11□□□□□ -0.65
SMAD4-206ENST00000588860 CYP27B1O15528 508 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 C7P10643 843 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 SF3B2Q13435 895 aaKnown RBP10.99□□□□□ -0.65
SMAD4-206ENST00000588860 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
SMAD4-206ENST00000588860 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 DCAF5Q96JK2 942 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 MEIS3Q99687 375 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 CARD10Q9BWT7 1032 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 CHPF2Q9P2E5 772 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 PCDH11XQ9BZA7 1347 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 PCDH11YQ9BZA8 1340 aa10.99□□□□□ -0.65
SMAD4-206ENST00000588860 NUCB1Q02818 461 aa10.98□□□□□ -0.65
SMAD4-206ENST00000588860 LARP1Q6PKG0 1096 aaKnown RBP10.98□□□□□ -0.65
SMAD4-206ENST00000588860 SIRT2Q8IXJ6 389 aa10.98□□□□□ -0.65
SMAD4-206ENST00000588860 SLC39A7Q92504 469 aa10.98□□□□□ -0.65
SMAD4-206ENST00000588860 PHAXQ9H814 394 aaKnown RBP10.98□□□□□ -0.65
SMAD4-206ENST00000588860 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
SMAD4-206ENST00000588860 HEG1Q9ULI3 1381 aa10.98□□□□□ -0.65
SMAD4-206ENST00000588860 GLI3P10071 1580 aa10.98□□□□□ -0.65
SMAD4-206ENST00000588860 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-206ENST00000588860 IL2RBP14784 551 aa10.97□□□□□ -0.65
SMAD4-206ENST00000588860 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
SMAD4-206ENST00000588860 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
SMAD4-206ENST00000588860 NFATC2IPQ8NCF5 419 aa10.97□□□□□ -0.65
SMAD4-206ENST00000588860 ZCRB1Q8TBF4 217 aaKnown RBP10.97□□□□□ -0.65
SMAD4-206ENST00000588860 METRNQ9UJH8 293 aa10.97□□□□□ -0.65
SMAD4-206ENST00000588860 ARFGEF2Q9Y6D5 1785 aa10.97□□□□□ -0.65
SMAD4-206ENST00000588860 NWD2Q9ULI1 1742 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 ATRNO75882 1429 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-206ENST00000588860 ANXA1P04083 346 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 CABP4P57796 275 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 CEP85Q6P2H3 762 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 ZNF790Q6PG37 636 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 CHD1LQ86WJ1 897 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 RPAP2Q8IXW5 612 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-206ENST00000588860 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms