RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 TRAK2O60296 914 aa17.29■□□□□ 0.36
NEDD4L-223ENST00000588516 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
NEDD4L-223ENST00000588516 EVA1CP58658 441 aa17.29■□□□□ 0.36
NEDD4L-223ENST00000588516 MCM10Q7L590 875 aa17.28■□□□□ 0.36
NEDD4L-223ENST00000588516 ATP10DQ9P241 1426 aa17.28■□□□□ 0.36
NEDD4L-223ENST00000588516 GNAI2P04899 355 aa17.27■□□□□ 0.36
NEDD4L-223ENST00000588516 MRE11P49959 708 aa17.27■□□□□ 0.36
NEDD4L-223ENST00000588516 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
NEDD4L-223ENST00000588516 OSBPL3Q9H4L5 887 aa17.27■□□□□ 0.36
NEDD4L-223ENST00000588516 CWC22Q9HCG8 908 aaKnown RBP17.27■□□□□ 0.36
NEDD4L-223ENST00000588516 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
NEDD4L-223ENST00000588516 ST18O60284 1047 aa17.26■□□□□ 0.35
NEDD4L-223ENST00000588516 ZBTB7AO95365 584 aa17.26■□□□□ 0.35
NEDD4L-223ENST00000588516 NUCB2P80303 420 aa17.26■□□□□ 0.35
NEDD4L-223ENST00000588516 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
NEDD4L-223ENST00000588516 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
NEDD4L-223ENST00000588516 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
NEDD4L-223ENST00000588516 CLEC17AQ6ZS10 378 aa17.25■□□□□ 0.35
NEDD4L-223ENST00000588516 BARGINQ6ZT62 677 aa17.25■□□□□ 0.35
NEDD4L-223ENST00000588516 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
NEDD4L-223ENST00000588516 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
NEDD4L-223ENST00000588516 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
NEDD4L-223ENST00000588516 EPB41L2O43491 1005 aaKnown RBP17.24■□□□□ 0.35
NEDD4L-223ENST00000588516 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
NEDD4L-223ENST00000588516 LRRC37A3O60309 1634 aa17.24■□□□□ 0.35
NEDD4L-223ENST00000588516 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
NEDD4L-223ENST00000588516 MCCP23508 829 aa17.23■□□□□ 0.35
NEDD4L-223ENST00000588516 MCM2P49736 904 aa17.23■□□□□ 0.35
NEDD4L-223ENST00000588516 KIF2CQ99661 725 aa17.23■□□□□ 0.35
NEDD4L-223ENST00000588516 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
NEDD4L-223ENST00000588516 ERC2O15083 957 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 NLRP6P59044 892 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 EYA1Q99502 592 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 MAP3K5Q99683 1374 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 PIK3C2AO00443 1686 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-223ENST00000588516 HOXB7P09629 217 aa17.21■□□□□ 0.35
NEDD4L-223ENST00000588516 GSPT1P15170 499 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-223ENST00000588516 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
NEDD4L-223ENST00000588516 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-223ENST00000588516 FHDC1Q9C0D6 1143 aaPredicted RBP17.21■□□□□ 0.35
NEDD4L-223ENST00000588516 AOX1Q06278 1338 aa17.21■□□□□ 0.35
NEDD4L-223ENST00000588516 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.34
NEDD4L-223ENST00000588516 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.34
NEDD4L-223ENST00000588516 PTGER2P43116 358 aa17.2■□□□□ 0.34
NEDD4L-223ENST00000588516 MEIS3Q99687 375 aa17.2■□□□□ 0.34
NEDD4L-223ENST00000588516 PLSCR1O15162 318 aa17.19■□□□□ 0.34
NEDD4L-223ENST00000588516 SDSP20132 328 aa17.19■□□□□ 0.34
NEDD4L-223ENST00000588516 HOXC9P31274 260 aa17.19■□□□□ 0.34
NEDD4L-223ENST00000588516 ATP8B2P98198 1209 aa17.19■□□□□ 0.34
NEDD4L-223ENST00000588516 NUTM2GQ5VZR2 741 aa17.19■□□□□ 0.34
NEDD4L-223ENST00000588516 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
NEDD4L-223ENST00000588516 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
NEDD4L-223ENST00000588516 FLIIQ13045 1269 aa17.18■□□□□ 0.34
NEDD4L-223ENST00000588516 CHD4Q14839 1912 aa17.18■□□□□ 0.34
NEDD4L-223ENST00000588516 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
NEDD4L-223ENST00000588516 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
NEDD4L-223ENST00000588516 FAM208AQ9UK61 1670 aaKnown RBP17.17■□□□□ 0.34
NEDD4L-223ENST00000588516 ANAPC15P60006 121 aa17.17■□□□□ 0.34
NEDD4L-223ENST00000588516 FKBP5Q13451 457 aaPredicted RBP17.17■□□□□ 0.34
NEDD4L-223ENST00000588516 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-223ENST00000588516 SOX12O15370 315 aa17.16■□□□□ 0.34
NEDD4L-223ENST00000588516 PDE1AP54750 535 aa17.16■□□□□ 0.34
NEDD4L-223ENST00000588516 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
NEDD4L-223ENST00000588516 ABTB2Q8N961 1025 aa17.16■□□□□ 0.34
NEDD4L-223ENST00000588516 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
NEDD4L-223ENST00000588516 THRAP3Q9Y2W1 955 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-223ENST00000588516 CRYBG1Q9Y4K1 1723 aa17.15■□□□□ 0.34
NEDD4L-223ENST00000588516 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
NEDD4L-223ENST00000588516 STAP2Q9UGK3 403 aa17.15■□□□□ 0.34
NEDD4L-223ENST00000588516 CASZ1Q86V15 1759 aa17.14■□□□□ 0.33
NEDD4L-223ENST00000588516 UTRNP46939 3433 aa17.14■□□□□ 0.33
NEDD4L-223ENST00000588516 GPR162Q16538 588 aa17.14■□□□□ 0.33
NEDD4L-223ENST00000588516 IP6K1Q92551 441 aa17.14■□□□□ 0.33
NEDD4L-223ENST00000588516 ANP32BQ92688 251 aaKnown RBP17.14■□□□□ 0.33
NEDD4L-223ENST00000588516 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
NEDD4L-223ENST00000588516 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
NEDD4L-223ENST00000588516 GRPEL1Q9HAV7 217 aa17.13■□□□□ 0.33
NEDD4L-223ENST00000588516 OVOS2A0A0G2JMS6 1433 aa17.12■□□□□ 0.33
NEDD4L-223ENST00000588516 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
NEDD4L-223ENST00000588516 MX1P20591 662 aa17.12■□□□□ 0.33
NEDD4L-223ENST00000588516 KLHL40Q2TBA0 621 aa17.12■□□□□ 0.33
NEDD4L-223ENST00000588516 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
NEDD4L-223ENST00000588516 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
NEDD4L-223ENST00000588516 G2E3Q7L622 706 aa17.11■□□□□ 0.33
NEDD4L-223ENST00000588516 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
NEDD4L-223ENST00000588516 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
NEDD4L-223ENST00000588516 PHRF1Q9P1Y6 1649 aaKnown RBP17.11■□□□□ 0.33
NEDD4L-223ENST00000588516 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
NEDD4L-223ENST00000588516 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
NEDD4L-223ENST00000588516 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms