RNA–Protein interactions for RNA: ENST00000585895.1

ARID3A-204, Transcript of AT-rich interaction domain 3A, human

TSL 2

Gene ARID3A, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID3A-204	ENST00000585895	SLFN5	Q08AF3	891 aa		33.77	■■■■□ 3
ARID3A-204	ENST00000585895	KRT24	Q2M2I5	525 aa		33.77	■■■■□ 3
ARID3A-204	ENST00000585895	ZBED9	Q6R2W3	1325 aa		33.77	■■■■□ 3
ARID3A-204	ENST00000585895	DUSP27	Q5VZP5	1158 aa		33.76	■■■□□ 2.99
ARID3A-204	ENST00000585895	INTS5	Q6P9B9	1019 aa	Known RBP	33.76	■■■□□ 2.99
ARID3A-204	ENST00000585895	GNPAT	O15228	680 aa		33.75	■■■□□ 2.99
ARID3A-204	ENST00000585895	C4B	P0C0L5	1744 aa		33.75	■■■□□ 2.99
ARID3A-204	ENST00000585895	C8orf58	Q8NAV2	365 aa		33.74	■■■□□ 2.99
ARID3A-204	ENST00000585895	CDCA7L	Q96GN5	454 aa		33.74	■■■□□ 2.99
ARID3A-204	ENST00000585895	RPS6KA4	O75676	772 aa		33.73	■■■□□ 2.99
ARID3A-204	ENST00000585895	RTCB	Q9Y3I0	505 aa	Known RBP	33.73	■■■□□ 2.99
ARID3A-204	ENST00000585895	SOS1	Q07889	1333 aa	Predicted RBP	33.73	■■■□□ 2.99
ARID3A-204	ENST00000585895	TAF1L	Q8IZX4	1826 aa		33.72	■■■□□ 2.99
ARID3A-204	ENST00000585895	R3HDM1	Q15032	1099 aa	Known RBP	33.72	■■■□□ 2.99
ARID3A-204	ENST00000585895	ELL2	O00472	640 aa	Predicted RBP	33.71	■■■□□ 2.99
ARID3A-204	ENST00000585895	A1BG	P04217	495 aa		33.71	■■■□□ 2.99
ARID3A-204	ENST00000585895	EIF2S2	P20042	333 aa	Known RBP	33.71	■■■□□ 2.99
ARID3A-204	ENST00000585895	FLAD1	Q8NFF5	587 aa		33.71	■■■□□ 2.99
ARID3A-204	ENST00000585895	ZBTB1	Q9Y2K1	713 aa		33.71	■■■□□ 2.99
ARID3A-204	ENST00000585895	COL5A3	P25940	1745 aa	Predicted RBP	33.7	■■■□□ 2.99
ARID3A-204	ENST00000585895	TRMT2A	Q8IZ69	625 aa	Known RBP	33.7	■■■□□ 2.99
ARID3A-204	ENST00000585895	CHMP4A	Q9BY43	222 aa		33.7	■■■□□ 2.99
ARID3A-204	ENST00000585895	CANX	P27824	592 aa	Known RBP	33.69	■■■□□ 2.98
ARID3A-204	ENST00000585895	SSFA2	P28290	1259 aa		33.69	■■■□□ 2.98
ARID3A-204	ENST00000585895	EXOSC9	Q06265	439 aa	Known RBP	33.69	■■■□□ 2.98
ARID3A-204	ENST00000585895	TSPYL6	Q8N831	410 aa		33.68	■■■□□ 2.98
ARID3A-204	ENST00000585895	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.67	■■■□□ 2.98
ARID3A-204	ENST00000585895	TWISTNB	Q3B726	338 aa	Predicted RBP	33.67	■■■□□ 2.98
ARID3A-204	ENST00000585895	HDGFL1	Q5TGJ6	251 aa		33.67	■■■□□ 2.98
ARID3A-204	ENST00000585895	ERBB4	Q15303	1308 aa		33.67	■■■□□ 2.98
ARID3A-204	ENST00000585895	PSD	A5PKW4	1024 aa	Predicted RBP	33.66	■■■□□ 2.98
ARID3A-204	ENST00000585895	PHF14	O94880	888 aa		33.66	■■■□□ 2.98
ARID3A-204	ENST00000585895	ADRA2B	P18089	450 aa		33.66	■■■□□ 2.98
ARID3A-204	ENST00000585895	TRAPPC3L	Q5T215	181 aa		33.66	■■■□□ 2.98
ARID3A-204	ENST00000585895	PNPLA7	Q6ZV29	1317 aa		33.66	■■■□□ 2.98
ARID3A-204	ENST00000585895	IL6ST	P40189	918 aa	Predicted RBP	33.65	■■■□□ 2.98
ARID3A-204	ENST00000585895	AMIGO3	Q86WK7	504 aa		33.65	■■■□□ 2.98
ARID3A-204	ENST00000585895	NECTIN2	Q92692	538 aa		33.64	■■■□□ 2.98
ARID3A-204	ENST00000585895	NBPF26	B4DH59	902 aa		33.63	■■■□□ 2.97
ARID3A-204	ENST00000585895	EIF5	P55010	431 aa	Known RBP	33.63	■■■□□ 2.97
ARID3A-204	ENST00000585895	NBPF10	Q6P3W6	841 aa	Known RBP	33.63	■■■□□ 2.97
ARID3A-204	ENST00000585895	SMIM5	Q71RC9	77 aa		33.63	■■■□□ 2.97
ARID3A-204	ENST00000585895	NPM2	Q86SE8	214 aa	Known RBP	33.63	■■■□□ 2.97
ARID3A-204	ENST00000585895	NBPF15	Q8N660	670 aa		33.63	■■■□□ 2.97
ARID3A-204	ENST00000585895	COL23A1	Q86Y22	540 aa	Predicted RBP	33.62	■■■□□ 2.97
ARID3A-204	ENST00000585895	MSH5	O43196	834 aa		33.61	■■■□□ 2.97
ARID3A-204	ENST00000585895	PIP4K2A	P48426	406 aa	Predicted RBP	33.61	■■■□□ 2.97
ARID3A-204	ENST00000585895	LAMB4	A4D0S4	1761 aa		33.6	■■■□□ 2.97
ARID3A-204	ENST00000585895		A0A087WZG4	1122 aa		33.6	■■■□□ 2.97
ARID3A-204	ENST00000585895	VAMP4	O75379	141 aa		33.6	■■■□□ 2.97
ARID3A-204	ENST00000585895	CCDC30	Q5VVM6	783 aa		33.6	■■■□□ 2.97
ARID3A-204	ENST00000585895	ARHGEF1	Q92888	912 aa	Known RBP	33.6	■■■□□ 2.97
ARID3A-204	ENST00000585895	YTHDC1	Q96MU7	727 aa	Known RBP	33.6	■■■□□ 2.97
ARID3A-204	ENST00000585895	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.6	■■■□□ 2.97
ARID3A-204	ENST00000585895	MYH14	Q7Z406	1995 aa	Known RBP	33.59	■■■□□ 2.97
ARID3A-204	ENST00000585895	RFC4	P35249	363 aa		33.58	■■■□□ 2.97
ARID3A-204	ENST00000585895	PDIA6	Q15084	440 aa		33.58	■■■□□ 2.97
ARID3A-204	ENST00000585895	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
ARID3A-204	ENST00000585895	DBF4	Q9UBU7	674 aa	Predicted RBP	33.58	■■■□□ 2.97
ARID3A-204	ENST00000585895	COL15A1	P39059	1388 aa		33.58	■■■□□ 2.97
ARID3A-204	ENST00000585895	MYL6B	P14649	208 aa		33.57	■■■□□ 2.96
ARID3A-204	ENST00000585895	CHPF2	Q9P2E5	772 aa		33.57	■■■□□ 2.96
ARID3A-204	ENST00000585895	UBR3	Q6ZT12	1888 aa		33.55	■■■□□ 2.96
ARID3A-204	ENST00000585895	SLC16A10	Q8TF71	515 aa		33.55	■■■□□ 2.96
ARID3A-204	ENST00000585895	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.55	■■■□□ 2.96
ARID3A-204	ENST00000585895	PROSER3	Q2NL68	480 aa		33.53	■■■□□ 2.96
ARID3A-204	ENST00000585895	STK31	Q9BXU1	1019 aa		33.53	■■■□□ 2.96
ARID3A-204	ENST00000585895	HYPK	Q9NX55	129 aa		33.53	■■■□□ 2.96
ARID3A-204	ENST00000585895	QSER1	Q2KHR3	1735 aa		33.53	■■■□□ 2.96
ARID3A-204	ENST00000585895	ZPR1	O75312	459 aa		33.52	■■■□□ 2.96
ARID3A-204	ENST00000585895	ANXA1	P04083	346 aa		33.52	■■■□□ 2.96
ARID3A-204	ENST00000585895	CT47B1	P0C2W7	299 aa	Predicted RBP	33.52	■■■□□ 2.96
ARID3A-204	ENST00000585895	ARX	Q96QS3	562 aa		33.52	■■■□□ 2.96
ARID3A-204	ENST00000585895	LRP10	Q7Z4F1	713 aa		33.51	■■■□□ 2.95
ARID3A-204	ENST00000585895	DZIP3	Q86Y13	1208 aa	Known RBP	33.51	■■■□□ 2.95
ARID3A-204	ENST00000585895	NARF	Q9UHQ1	456 aa		33.51	■■■□□ 2.95
ARID3A-204	ENST00000585895	TBC1D2B	Q9UPU7	963 aa		33.5	■■■□□ 2.95
ARID3A-204	ENST00000585895	USP42	Q9H9J4	1324 aa	Known RBP	33.5	■■■□□ 2.95
ARID3A-204	ENST00000585895	TUBGCP6	Q96RT7	1819 aa		33.49	■■■□□ 2.95
ARID3A-204	ENST00000585895	ZNF428	Q96B54	188 aa		33.49	■■■□□ 2.95
ARID3A-204	ENST00000585895	SRP68	Q9UHB9	627 aa	Known RBP	33.48	■■■□□ 2.95
ARID3A-204	ENST00000585895	TCERG1	O14776	1098 aa	Known RBP	33.47	■■■□□ 2.95
ARID3A-204	ENST00000585895	ZBTB7A	O95365	584 aa		33.46	■■■□□ 2.95
ARID3A-204	ENST00000585895	USPL1	Q5W0Q7	1092 aa		33.46	■■■□□ 2.95
ARID3A-204	ENST00000585895	KIF6	Q6ZMV9	814 aa		33.46	■■■□□ 2.95
ARID3A-204	ENST00000585895	COPS6	Q7L5N1	327 aa		33.46	■■■□□ 2.95
ARID3A-204	ENST00000585895	MTFR1L	Q9H019	292 aa		33.46	■■■□□ 2.95
ARID3A-204	ENST00000585895	SLC4A2	P04920	1241 aa		33.45	■■■□□ 2.95
ARID3A-204	ENST00000585895	XAGE3	Q8WTP9	111 aa		33.45	■■■□□ 2.95
ARID3A-204	ENST00000585895	CAMTA2	O94983	1202 aa		33.44	■■■□□ 2.94
ARID3A-204	ENST00000585895	GYS1	P13807	737 aa		33.44	■■■□□ 2.94
ARID3A-204	ENST00000585895	AIMP1	Q12904	312 aa	Known RBP	33.44	■■■□□ 2.94
ARID3A-204	ENST00000585895	TTLL7	Q6ZT98	887 aa		33.44	■■■□□ 2.94
ARID3A-204	ENST00000585895	CASZ1	Q86V15	1759 aa		33.43	■■■□□ 2.94
ARID3A-204	ENST00000585895	NLGN1	Q8N2Q7	840 aa		33.43	■■■□□ 2.94
ARID3A-204	ENST00000585895	ERVV-1	B6SEH8	477 aa		33.41	■■■□□ 2.94
ARID3A-204	ENST00000585895	RGL2	O15211	777 aa		33.41	■■■□□ 2.94
ARID3A-204	ENST00000585895	PHAX	Q9H814	394 aa	Known RBP	33.41	■■■□□ 2.94
ARID3A-204	ENST00000585895	MAP3K15	Q6ZN16	1313 aa		33.41	■■■□□ 2.94
ARID3A-204	ENST00000585895	ALDH1L2	Q3SY69	923 aa		33.4	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms