RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
SREBF1-222ENST00000583732 HSPA6P17066 643 aa20.43■□□□□ 0.86
SREBF1-222ENST00000583732 SIPA1L3O60292 1781 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-222ENST00000583732 TM4SF1P30408 202 aa20.42■□□□□ 0.86
SREBF1-222ENST00000583732 DALRD3Q5D0E6 543 aaKnown RBP20.42■□□□□ 0.86
SREBF1-222ENST00000583732 CANXP27824 592 aaKnown RBP20.41■□□□□ 0.86
SREBF1-222ENST00000583732 C9orf131Q5VYM1 1079 aa20.41■□□□□ 0.86
SREBF1-222ENST00000583732 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
SREBF1-222ENST00000583732 NARFQ9UHQ1 456 aa20.41■□□□□ 0.86
SREBF1-222ENST00000583732 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
SREBF1-222ENST00000583732 NFIXQ14938 502 aa20.4■□□□□ 0.86
SREBF1-222ENST00000583732 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
SREBF1-222ENST00000583732 DLEC1Q9Y238 1755 aa20.39■□□□□ 0.86
SREBF1-222ENST00000583732 NPC1L1Q9UHC9 1359 aa20.39■□□□□ 0.85
SREBF1-222ENST00000583732 TEFQ10587 303 aa20.39■□□□□ 0.85
SREBF1-222ENST00000583732 NMRK2Q9NPI5 230 aa20.39■□□□□ 0.85
SREBF1-222ENST00000583732 VSIG10Q8N0Z9 540 aa20.38■□□□□ 0.85
SREBF1-222ENST00000583732 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
SREBF1-222ENST00000583732 BCL2L12Q9HB09 334 aa20.38■□□□□ 0.85
SREBF1-222ENST00000583732 SBF1O95248 1867 aa20.38■□□□□ 0.85
SREBF1-222ENST00000583732 SCN7AQ01118 1682 aa20.38■□□□□ 0.85
SREBF1-222ENST00000583732 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
SREBF1-222ENST00000583732 RNF181Q9P0P0 153 aa20.37■□□□□ 0.85
SREBF1-222ENST00000583732 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-222ENST00000583732 BICDL1Q6ZP65 573 aa20.36■□□□□ 0.85
SREBF1-222ENST00000583732 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
SREBF1-222ENST00000583732 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-222ENST00000583732 CARMIL3Q8ND23 1372 aa20.35■□□□□ 0.85
SREBF1-222ENST00000583732 STARD3NLO95772 234 aa20.35■□□□□ 0.85
SREBF1-222ENST00000583732 SERPINB2P05120 415 aa20.35■□□□□ 0.85
SREBF1-222ENST00000583732 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
SREBF1-222ENST00000583732 RASSF7Q02833 373 aa20.34■□□□□ 0.85
SREBF1-222ENST00000583732 ZNF790Q6PG37 636 aa20.34■□□□□ 0.85
SREBF1-222ENST00000583732 ANKRD31Q8N7Z5 1873 aa20.33■□□□□ 0.85
SREBF1-222ENST00000583732 TOMM70O94826 608 aa20.33■□□□□ 0.85
SREBF1-222ENST00000583732 PRKAR2BP31323 418 aa20.33■□□□□ 0.85
SREBF1-222ENST00000583732 CFAP53Q96M91 514 aa20.33■□□□□ 0.85
SREBF1-222ENST00000583732 TNRC6CQ9HCJ0 1690 aaKnown RBP20.32■□□□□ 0.84
SREBF1-222ENST00000583732 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
SREBF1-222ENST00000583732 C2CD5Q86YS7 1000 aa20.32■□□□□ 0.84
SREBF1-222ENST00000583732 PHACTR3Q96KR7 559 aa20.32■□□□□ 0.84
SREBF1-222ENST00000583732 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
SREBF1-222ENST00000583732 COL11A2P13942 1736 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-222ENST00000583732 TIAM2Q8IVF5 1701 aa20.31■□□□□ 0.84
SREBF1-222ENST00000583732 A0A087WZG4 1122 aa20.31■□□□□ 0.84
SREBF1-222ENST00000583732 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-222ENST00000583732 RSPH6AQ9H0K4 717 aa20.31■□□□□ 0.84
SREBF1-222ENST00000583732 KCNQ3O43525 872 aa20.3■□□□□ 0.84
SREBF1-222ENST00000583732 TBC1D9BQ66K14 1250 aa20.3■□□□□ 0.84
SREBF1-222ENST00000583732 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
SREBF1-222ENST00000583732 TBC1D2BQ9UPU7 963 aa20.3■□□□□ 0.84
SREBF1-222ENST00000583732 BCORQ6W2J9 1755 aa20.3■□□□□ 0.84
SREBF1-222ENST00000583732 CACNA1SQ13698 1873 aa20.3■□□□□ 0.84
SREBF1-222ENST00000583732 WDR90Q96KV7 1748 aa20.3■□□□□ 0.84
SREBF1-222ENST00000583732 CCDC24Q8N4L8 307 aa20.29■□□□□ 0.84
SREBF1-222ENST00000583732 CEMIPQ8WUJ3 1361 aa20.29■□□□□ 0.84
SREBF1-222ENST00000583732 KDM2BQ8NHM5 1336 aa20.28■□□□□ 0.84
SREBF1-222ENST00000583732 BTBD11A6QL63 1104 aa20.28■□□□□ 0.84
SREBF1-222ENST00000583732 A1BGP04217 495 aa20.28■□□□□ 0.84
SREBF1-222ENST00000583732 APLP1P51693 650 aa20.28■□□□□ 0.84
SREBF1-222ENST00000583732 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-222ENST00000583732 H0YIN7 160 aa20.27■□□□□ 0.84
SREBF1-222ENST00000583732 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-222ENST00000583732 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
SREBF1-222ENST00000583732 TTLL6Q8N841 843 aa20.27■□□□□ 0.84
SREBF1-222ENST00000583732 RRAGCQ9HB90 399 aa20.27■□□□□ 0.84
SREBF1-222ENST00000583732 NUDCQ9Y266 331 aa20.27■□□□□ 0.84
SREBF1-222ENST00000583732 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
SREBF1-222ENST00000583732 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-222ENST00000583732 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-222ENST00000583732 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
SREBF1-222ENST00000583732 ZNF219Q9P2Y4 722 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-222ENST00000583732 PRELPP51888 382 aa20.25■□□□□ 0.83
SREBF1-222ENST00000583732 MCM10Q7L590 875 aa20.25■□□□□ 0.83
SREBF1-222ENST00000583732 RBM46Q8TBY0 533 aaKnown RBP20.25■□□□□ 0.83
SREBF1-222ENST00000583732 ZNF622Q969S3 477 aaKnown RBP eCLIP20.25■□□□□ 0.83
SREBF1-222ENST00000583732 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
SREBF1-222ENST00000583732 PRR5LQ6MZQ0 368 aa20.24■□□□□ 0.83
SREBF1-222ENST00000583732 NPHP1O15259 732 aa20.23■□□□□ 0.83
SREBF1-222ENST00000583732 LMNB1P20700 586 aa20.23■□□□□ 0.83
SREBF1-222ENST00000583732 DCTN1Q14203 1278 aa20.23■□□□□ 0.83
SREBF1-222ENST00000583732 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
SREBF1-222ENST00000583732 CAMTA2O94983 1202 aa20.22■□□□□ 0.83
SREBF1-222ENST00000583732 HTRA3P83110 453 aa20.22■□□□□ 0.83
SREBF1-222ENST00000583732 USP16Q9Y5T5 823 aa20.22■□□□□ 0.83
SREBF1-222ENST00000583732 NFKBIEO00221 500 aa20.21■□□□□ 0.83
SREBF1-222ENST00000583732 PDE6BP35913 854 aa20.21■□□□□ 0.83
SREBF1-222ENST00000583732 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
SREBF1-222ENST00000583732 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
SREBF1-222ENST00000583732 DLG5Q8TDM6 1919 aa20.2■□□□□ 0.82
SREBF1-222ENST00000583732 IFFO2Q5TF58 517 aa20.2■□□□□ 0.82
SREBF1-222ENST00000583732 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
SREBF1-222ENST00000583732 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
SREBF1-222ENST00000583732 BRIP1Q9BX63 1249 aa20.2■□□□□ 0.82
SREBF1-222ENST00000583732 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
SREBF1-222ENST00000583732 LAMB4A4D0S4 1761 aa20.19■□□□□ 0.82
SREBF1-222ENST00000583732 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
SREBF1-222ENST00000583732 C21orf2O43822 256 aa20.19■□□□□ 0.82
SREBF1-222ENST00000583732 DICER1Q9UPY3 1922 aaKnown RBP20.19■□□□□ 0.82
SREBF1-222ENST00000583732 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms